FFCP PHASE1:Hg19::chr19:49383883..49383887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:49383883..49383887,+ | |||
|coexpression_cluster_id=C898 | |||
|description=CAGE_peak_at_chr19:49383883..49383887,+ | |||
|id=chr19:49383883..49383887,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.22e-28!172;CL:0000566!3.22e-28!172;CL:0000738!6.83e-27!140;CL:0002032!2.82e-26!165;CL:0000837!2.82e-26!165;CL:0000988!1.79e-25!182;CL:0002057!5.88e-24!42;CL:0000860!4.96e-23!45;CL:0002031!1.55e-21!124;CL:0002087!2.35e-21!119;CL:0000763!2.85e-20!112;CL:0000049!2.85e-20!112;CL:0000766!4.66e-20!76;CL:0000839!2.43e-16!70;CL:0000557!3.65e-16!71;CL:0002009!1.17e-15!65;CL:0002194!4.45e-15!63;CL:0000576!4.45e-15!63;CL:0000040!4.45e-15!63;CL:0000559!4.45e-15!63;CL:0000063!8.35e-10!578;CL:0000134!7.04e-09!358;CL:0000219!1.48e-08!390;CL:0002320!2.81e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.37e-29;33!CL:0002057;5.37e-29;33!CL:0000473;1.40e-20;39!CL:0000234;1.40e-20;39!CL:0000576;4.26e-17;48!CL:0000766;1.27e-14;69!CL:0002087;2.12e-10;104!CL:0000763;2.69e-08;100!CL:0000094;3.82e-08;8!CL:0000738;2.48e-07;136!CL:0000081;7.75e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.23e-33,42;CL:0002057,2.23e-33,42;CL:0000738,8.51e-33,136;CL:0000766,2.94e-29,72;CL:0000473,3.45e-29,48;CL:0000234,3.45e-29,48;CL:0000037,7.48e-29,168;CL:0000988,8.41e-27,177;CL:0002087,3.34e-26,115;CL:0002032,6.24e-26,161;CL:0000837,6.24e-26,161;CL:0002031,1.64e-24,120;CL:0000557,1.54e-22,67;CL:0000839,5.53e-22,66;CL:0002194,1.47e-21,59;CL:0000576,1.47e-21,59;CL:0000040,1.47e-21,59;CL:0000559,1.47e-21,59;CL:0002009,1.62e-21,61;CL:0000763,4.87e-21,108;CL:0000049,4.87e-21,108;CL:0000094,4.80e-08,8;CL:0000134,6.09e-08,354;CL:0002320,1.42e-07,361;CL:0000081,9.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-24;42 | |||
|ontology_enrichment_disease=DOID:162!2.60e-33!235;DOID:14566!2.54e-32!239;DOID:0050686!3.65e-22!137;DOID:0050687!6.39e-22!143;DOID:305!1.32e-16!106;DOID:1749!9.78e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.84e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.52e-20,143;DOID:162,9.78e-18,235;DOID:305,1.58e-17,106;DOID:14566,9.08e-17,239;DOID:1749,7.25e-13,14;DOID:0050686,7.33e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.49e-18!102;UBERON:0003061!9.49e-18!102;UBERON:0001474!3.20e-16!86;UBERON:0002371!6.87e-16!80;UBERON:0002193!3.22e-15!112;UBERON:0004765!1.02e-11!101;UBERON:0001434!1.02e-11!101;UBERON:0002405!6.93e-11!115;UBERON:0002384!1.27e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.80e-22,82;UBERON:0002371,4.02e-21,76;UBERON:0002390,1.03e-20,98;UBERON:0003061,1.03e-20,98;UBERON:0004765,1.59e-19,90;UBERON:0002193,4.39e-17,108;UBERON:0001434,1.44e-16,100;UBERON:0002405,4.22e-16,93;UBERON:0002384,2.12e-08,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.18009283054671,1.53531759238885,2.32224184974114,0,0,0.369754010166788,2.32401601740905,0.995184627411951,1.17440175733939,45.9816189081458,41.7132450737895,35.5897827973997,0.223915474239924,0,0,1.74477886535478,1.51150377475524,1.69808842831471,7.43772918098191,4.93401465626191,6.19412741790207,9.78154133895312,5.12321413058201,5.67557351732605,14.8240642716746,7.10033151942209,20.3139729891513,5.08254316765033,3.27487380069415,5.39336362668203,19.5893691117378,9.62787081228281,23.0161365287655,1.9791078011203,4.78712778291916,3.40979800426155,12.4789972610291,7.94339314567596,6.22822248995575,9.04495194924276,10.429658368404,2.82345498116652,15.1349875658342,8.83866326370155,9.17740923578565,0.633765858935825,1.27562579979026,1.04829322754188,1.01095768031846,1.35159203557356,1.44653028027372,0.285012743741249,0.59675003159727,1.46131323011707,0,0,0,0,0,0,0.661044872784862,0,9.10740750575117,10.5702694086769,10.7036503875064,1.32171328579026,1.12101712596307,0,4.52432471261816,12.1833336452241,23.6441723849436,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,1.08321545506006,0.128091319725675,0.910415432919148,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0.766440987203842,0.34362744548263,1.77113784413652,0,0,0,0,0,0,0.236777252044017,0.821127996921047,4.63695509416885,10.1627274397733,7.67569340578835,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0.238490624305342,1.14398982156026,1.11437250398869,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,6.58902087180316,19.3890132074163,0,1.98788780678127,0,1.45650098894541,0.573673241497627,0,0.560677600142307,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,0,0.89694817844431,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0.176096868026452,8.29312462163088,10.3766366460212,30.6769113226103,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.42156779497018,0,0,0,0,6.08118903205952,0.502257091432126,0,0,0,0,0.289562613335158,0,0.179060963239896,5.60425719967636,7.29013812747131,11.2126338926949,11.9359023740166,0.254094624222463,0,0,0.335032530668698,0,3.74503511973591,17.9496875522415,2.07207756718018,0.24538298343828,1.00034104211935,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,19.1985638728569,2.13455115606889,0.303127571446259,0,0,0,0.61384789315225,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0.40101294060657,1.01289087829486,0.114814448164607,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,1.25924938732256,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,1.03558180854457,0,0,0,0,0.507447609232169,0,1.13929437434833,1.19115887728894,0.822724546172388,1.94541993357815,0.540031437238115,0,0.106824071127473,0.962479855263359,5.14584453560167,1.85803175125719,2.16403819464667,0.569134746787313,0.637705090915289,0,0.191505370132367,0.846694330895531,0.324621940274555,0.561594356226918,0.684704037099577,0,0,0.677167111206413,0.1605880751037,0,2.98092366383228,1.71752672377882,0,0.223676107892416,0.166849141711909,0,0.278406173895242,1.23087398947712,0.811367035427949,1.6653598399891,1.4098700508785,0.37428108081644,0,0,0.334330152832435,2.55722532125772,0.47748896947538,0,0,0,0,3.00533503561846,0.16480387422676,5.70038601945582,1.59398390600856,0,0.755798243562828,0.920418142519393,4.30796819113743,0.311039587661807,3.95420745048238,3.40140231883657,0.511572370226872,0.0986434056369336,0,2.22273980289274,0,0,0,0.260427761085233,0.349839999984783,0,2.04828206913899,0.762760950878299,0.236387681767936,0.344743373241465,6.12369688104834,0.173624994933292,0,0,0,0.221158519862449,0,0,2.1787692703798,3.20674611840788,0.384751292518985,1.36730467016401,1.1528195219403,1.25660702173681,0,2.23300811812344,0.0915975934018623,1.5991043280559,1.02193298195737,0.156980256395025,0.997270091400938,0.225595660617181,0,0,1.13852239634511,2.70192184266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| |||
|short_description=p@chr19:49383883..49383887,+ | |||
}} |
Latest revision as of 15:55, 27 July 2015
Short description: | p@chr19:49383883..49383887, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49383883..49383887, + |
Coexpression cluster: | C898_CD14_Mast_Basophils_Natural_CD19_immature_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.23e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.23e-33 | 42 |
leukocyte | 8.51e-33 | 136 |
myeloid leukocyte | 2.94e-29 | 72 |
defensive cell | 3.45e-29 | 48 |
phagocyte | 3.45e-29 | 48 |
hematopoietic stem cell | 7.48e-29 | 168 |
hematopoietic cell | 8.41e-27 | 177 |
nongranular leukocyte | 3.34e-26 | 115 |
hematopoietic oligopotent progenitor cell | 6.24e-26 | 161 |
hematopoietic multipotent progenitor cell | 6.24e-26 | 161 |
hematopoietic lineage restricted progenitor cell | 1.64e-24 | 120 |
granulocyte monocyte progenitor cell | 1.54e-22 | 67 |
myeloid lineage restricted progenitor cell | 5.53e-22 | 66 |
monopoietic cell | 1.47e-21 | 59 |
monocyte | 1.47e-21 | 59 |
monoblast | 1.47e-21 | 59 |
promonocyte | 1.47e-21 | 59 |
macrophage dendritic cell progenitor | 1.62e-21 | 61 |
myeloid cell | 4.87e-21 | 108 |
common myeloid progenitor | 4.87e-21 | 108 |
granulocyte | 4.80e-08 | 8 |
mesenchymal cell | 6.09e-08 | 354 |
connective tissue cell | 1.42e-07 | 361 |
blood cell | 9.01e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.80e-22 | 82 |
bone marrow | 4.02e-21 | 76 |
hematopoietic system | 1.03e-20 | 98 |
blood island | 1.03e-20 | 98 |
skeletal element | 1.59e-19 | 90 |
hemolymphoid system | 4.39e-17 | 108 |
skeletal system | 1.44e-16 | 100 |
immune system | 4.22e-16 | 93 |
connective tissue | 2.12e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.52e-20 | 143 |
cancer | 9.78e-18 | 235 |
carcinoma | 1.58e-17 | 106 |
disease of cellular proliferation | 9.08e-17 | 239 |
squamous cell carcinoma | 7.25e-13 | 14 |
organ system cancer | 7.33e-08 | 137 |