FFCP PHASE1:Hg19::chr19:51857495..51857576,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:51857495..51857576,-
|short_description=p@chr19:51857495..51857576,-
|description=CAGE_peak_at_chr19:51857495..51857576,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:51857495..51857576,- | |||
|coexpression_cluster_id=C3246 | |||
|description=CAGE_peak_at_chr19:51857495..51857576,- | |||
|id=chr19:51857495..51857576,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.38e-15;5!CL:0002602;4.03e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-14,5;CL:0002602,4.43e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.60e-10;11!UBERON:0009497;1.81e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.32e-12!347;UBERON:0004921!7.09e-07!129;UBERON:0004185!7.09e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.02e-09;5!UBERON:0002216;1.02e-09;5!UBERON:0011134;1.02e-09;5!UBERON:0002209;1.02e-09;5!UBERON:0002213;1.02e-09;5!UBERON:0007844;1.02e-09;5!UBERON:0011138;1.02e-09;5!UBERON:0001130;1.02e-09;5!UBERON:0001066;1.02e-09;5!UBERON:0001468;1.02e-09;5!UBERON:0002107;3.32e-09;19!UBERON:0006925;3.32e-09;19!UBERON:0002365;1.88e-07;31!UBERON:0002330;1.88e-07;31!UBERON:0006444;4.03e-07;2!UBERON:0001995;4.03e-07;2!UBERON:0004715;4.03e-07;2!UBERON:0005090;8.66e-07;2!UBERON:0001630;8.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.69e-09,5;UBERON:0002216,1.69e-09,5;UBERON:0011134,1.69e-09,5;UBERON:0002209,1.69e-09,5;UBERON:0002213,1.69e-09,5;UBERON:0005856,1.69e-09,5;UBERON:0005866,1.69e-09,5;UBERON:0005863,1.69e-09,5;UBERON:0007844,1.69e-09,5;UBERON:0011138,1.69e-09,5;UBERON:0001130,1.69e-09,5;UBERON:0001066,1.69e-09,5;UBERON:0001468,1.69e-09,5;UBERON:0002107,3.05e-09,19;UBERON:0006925,3.05e-09,19;UBERON:0008836,3.05e-09,19;UBERON:0008835,8.93e-08,22;UBERON:0003894,8.93e-08,22;UBERON:0002365,9.55e-08,31;UBERON:0002330,9.55e-08,31;UBERON:0009854,2.26e-07,23;UBERON:0006444,4.43e-07,2;UBERON:0001995,4.43e-07,2;UBERON:0004715,4.43e-07,2;UBERON:0005090,6.51e-07,2;UBERON:0001630,6.51e-07,2;UBERON:0011216,8.99e-07,223 | |||
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| ||
|short_description=p@chr19:51857495..51857576,- | |||
}} | }} |
Latest revision as of 16:40, 27 July 2015
Short description: | p@chr19:51857495..51857576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51857495..51857576, - |
Coexpression cluster: | C3246_hepatoma_hepatocellular_rhabdomyosarcoma_hepatoblastoma_liver_Prostate_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-14 | 5 |
annulus pulposus cell | 4.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.69e-09 | 5 |
symphysis | 1.69e-09 | 5 |
nonsynovial joint | 1.69e-09 | 5 |
fibrous joint | 1.69e-09 | 5 |
cartilaginous joint | 1.69e-09 | 5 |
developing mesenchymal condensation | 1.69e-09 | 5 |
pre-cartilage condensation | 1.69e-09 | 5 |
cartilaginous condensation | 1.69e-09 | 5 |
cartilage element | 1.69e-09 | 5 |
post-cranial axial skeletal system | 1.69e-09 | 5 |
vertebral column | 1.69e-09 | 5 |
intervertebral disk | 1.69e-09 | 5 |
intervertebral joint | 1.69e-09 | 5 |
liver | 3.05e-09 | 19 |
digestive gland | 3.05e-09 | 19 |
liver bud | 3.05e-09 | 19 |
hepatic diverticulum | 8.93e-08 | 22 |
liver primordium | 8.93e-08 | 22 |
exocrine gland | 9.55e-08 | 31 |
exocrine system | 9.55e-08 | 31 |
digestive tract diverticulum | 2.26e-07 | 23 |
annulus fibrosus | 4.43e-07 | 2 |
fibrocartilage | 4.43e-07 | 2 |
annulus fibrosus disci intervertebralis | 4.43e-07 | 2 |
muscle structure | 6.51e-07 | 2 |
muscle organ | 6.51e-07 | 2 |
organ system subdivision | 8.99e-07 | 223 |