FFCP PHASE1:Hg19::chr1:117008831..117008843,+: Difference between revisions
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|id=chr1:117008831..117008843,+
|short_description=p@chr1:117008831..117008843,+
|description=CAGE_peak_at_chr1:117008831..117008843,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:117008831..117008843,+ | |||
|coexpression_cluster_id=C1453 | |||
|description=CAGE_peak_at_chr1:117008831..117008843,+ | |||
|id=chr1:117008831..117008843,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.29e-13!12;CL:0000417!3.29e-13!12;CL:0000668!3.29e-13!12;CL:0000414!3.29e-13!12;CL:0000412!3.29e-13!12;CL:0000182!3.29e-13!12;CL:0000167!3.40e-07!1;CL:0000164!3.40e-07!1;CL:0000502!3.40e-07!1;CL:0000172!3.40e-07!1;CL:0000173!3.40e-07!1;CL:0002351!3.40e-07!1;CL:0000223!3.84e-07!59;CL:0002563!3.85e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.16e-41;12!CL:0002535;1.82e-11;2!CL:0002231;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.58e-41,12;CL:0000223,1.62e-16,58;CL:0002535,1.82e-11,2;CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.88e-64;11!UBERON:0009497;2.01e-54;13!UBERON:0001041;1.13e-23;30!UBERON:0003104;2.87e-22;31!CL:0000223;3.93e-11;58 | |||
|ontology_enrichment_disease=DOID:4430!3.40e-07!1;DOID:7!4.94e-07!39;DOID:5093!6.45e-07!4;DOID:1612!6.45e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:7;3.10e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,7.65e-13,39;DOID:305,6.13e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002365!7.09e-12!31;UBERON:0002330!7.09e-12!31;UBERON:0002107!1.25e-11!19;UBERON:0006925!1.25e-11!19;UBERON:0008836!1.25e-11!19;UBERON:0009497!1.34e-11!25;UBERON:0000015!1.34e-11!25;UBERON:0002423!1.34e-11!25;UBERON:0006235!1.34e-11!25;UBERON:0004161!1.34e-11!25;UBERON:0002530!9.92e-11!59;UBERON:0002368!2.63e-10!35;UBERON:0008835!5.83e-10!22;UBERON:0003894!5.83e-10!22;UBERON:0003929!6.61e-10!54;UBERON:0009854!1.68e-09!23;UBERON:0007499!1.08e-08!25;UBERON:0005057!2.46e-08!26;UBERON:0009856!2.46e-08!26;UBERON:0000949!9.44e-08!45;UBERON:0006122!1.33e-07!1;UBERON:0001242!3.85e-07!4;UBERON:0001262!3.85e-07!4;UBERON:0004786!3.85e-07!4;UBERON:0004808!3.85e-07!4;UBERON:0001277!3.85e-07!4;UBERON:0003296!7.72e-07!4;UBERON:0010133!7.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.63e-37;19!UBERON:0006925;2.63e-37;19!UBERON:0002423;2.18e-28;25!UBERON:0002365;1.46e-21;31!UBERON:0002330;1.46e-21;31!UBERON:0002368;2.70e-20;33!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0000949;6.39e-11;43!UBERON:0002530;7.70e-10;57!UBERON:0005172;1.04e-08;52!UBERON:0005173;1.04e-08;52!UBERON:0002417;2.43e-07;58!UBERON:0000916;2.43e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.80e-37,19;UBERON:0006925,2.80e-37,19;UBERON:0008836,2.80e-37,19;UBERON:0008835,3.23e-32,22;UBERON:0003894,3.23e-32,22;UBERON:0009854,8.01e-31,23;UBERON:0007499,2.29e-28,25;UBERON:0009497,2.29e-28,25;UBERON:0000015,2.29e-28,25;UBERON:0002423,2.29e-28,25;UBERON:0006235,2.29e-28,25;UBERON:0004161,2.29e-28,25;UBERON:0009856,2.79e-27,26;UBERON:0003929,4.20e-23,54;UBERON:0002365,6.77e-23,31;UBERON:0002330,6.77e-23,31;UBERON:0002368,2.76e-20,35;UBERON:0002530,3.42e-16,59;UBERON:0000949,8.80e-16,45;UBERON:0005911,3.99e-15,82;UBERON:0005172,3.80e-13,54;UBERON:0005173,3.80e-13,54;UBERON:0002417,7.95e-12,60;UBERON:0000916,7.95e-12,60;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0004921,2.60e-10,118;UBERON:0001007,2.53e-08,145;UBERON:0001555,2.53e-08,145;UBERON:0007026,2.53e-08,145;UBERON:0000490,3.32e-08,148;UBERON:0001041,4.04e-08,87;UBERON:0005256,1.08e-07,122;UBERON:0004119,1.67e-07,160;UBERON:0000925,1.67e-07,160;UBERON:0006595,1.67e-07,160;UBERON:0005177,5.70e-07,101 | |||
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|short_description=p@chr1:117008831..117008843,+ | |||
}} | }} |
Latest revision as of 20:06, 27 July 2015
Short description: | p@chr1:117008831..117008843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:117008831..117008843, + |
Coexpression cluster: | C1453_argyrophil_hepatocellular_Intestinal_small_liver_hepatoblastoma_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.58e-41 | 12 |
endodermal cell | 1.62e-16 | 58 |
epithelial cell of cervix | 1.82e-11 | 2 |
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 7.65e-13 | 39 |
carcinoma | 6.13e-09 | 106 |