FFCP PHASE1:Hg19::chr1:119427224..119427229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:119427224..119427229,- | |||
|description=CAGE_peak_at_chr1:119427224..119427229,- | |description=CAGE_peak_at_chr1:119427224..119427229,- | ||
|id=chr1:119427224..119427229,- | |id=chr1:119427224..119427229,- | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-16!180;CL:0002620!5.21e-13!23;CL:0000057!2.91e-10!75;CL:0000327!1.14e-07!14;CL:0000153!4.20e-07!9;CL:0000447!4.20e-07!9;CL:0000136!4.86e-07!15;CL:0000499!8.39e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.03e-16!180;CL:0002620!5.21e-13!23;CL:0000057!2.91e-10!75;CL:0000327!1.14e-07!14;CL:0000153!4.20e-07!9;CL:0000447!4.20e-07!9;CL:0000136!4.86e-07!15;CL:0000499!8.39e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.07e-19;23!CL:0000327;4.75e-10;15!CL:0000188;1.86e-09;9!CL:0000153;4.37e-09;9!CL:0000447;4.37e-09;9!CL:0000062;1.84e-08;9!CL:0000136;2.61e-08;13!CL:0000499;4.12e-08;28!CL:0002551;3.74e-07;6!CL:0002570;3.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.51e-19,23;CL:0000057,8.87e-12,76;CL:0000136,1.99e-10,15;CL:0000327,4.52e-10,15;CL:0000188,1.66e-09,9;CL:0000153,3.41e-09,9;CL:0000447,3.41e-09,9;CL:0000048,1.37e-08,427;CL:0000062,2.13e-08,11;CL:0000375,2.13e-08,11;CL:0000335,2.13e-08,11;CL:0002320,3.07e-08,361;CL:0000499,3.58e-08,28;CL:0000723,4.18e-08,433;CL:0000134,4.82e-08,354;CL:0000219,5.43e-08,386;CL:0000034,1.73e-07,441;CL:0002551,4.07e-07,6;CL:0002570,4.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000335;1.96e-08;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.46e-11!45;UBERON:0002416!1.46e-11!45;UBERON:0002097!2.68e-09!40;UBERON:0000475!1.76e-07!365;UBERON:0004290!2.65e-07!70 | |ontology_enrichment_uberon=UBERON:0002199!1.46e-11!45;UBERON:0002416!1.46e-11!45;UBERON:0002097!2.68e-09!40;UBERON:0000475!1.76e-07!365;UBERON:0004290!2.65e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.52e-17;16!UBERON:0002036;6.52e-17;16!UBERON:0002199;4.82e-13;46!UBERON:0002416;4.82e-13;46!UBERON:0002097;8.72e-13;41!UBERON:0003102;4.16e-11;50!UBERON:0002067;1.25e-09;9!UBERON:0001013;4.79e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.81e-20,46;UBERON:0002416,1.81e-20,46;UBERON:0002097,1.28e-16,41;UBERON:0002384,5.11e-10,371;UBERON:0002067,1.15e-09,9;UBERON:0004016,1.15e-09,9;UBERON:0010083,1.15e-09,9;UBERON:0001013,6.23e-09,14;UBERON:0003102,1.34e-07,99;UBERON:0002329,4.25e-07,71;UBERON:0003059,4.25e-07,71;UBERON:0007282,4.25e-07,71;UBERON:0004290,4.25e-07,71;UBERON:0009618,4.25e-07,71;UBERON:0003077,6.74e-07,72;UBERON:0007285,6.74e-07,72;UBERON:0000486,7.15e-07,83 | |||
|phase1_expression=8.72056220498672,10.4909256706582,0.140954404095971,3.00219895059391,0,0,2.53299878168311,5.05375898741465,7.05201196139564,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.502170558379211,5.9602456483402,2.62721886239826,2.75487734597877,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.12786256184353,13.373248638229,8.02140657017423,24.3342151854184,1.5905718941022,16.058950719987,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,1.51956613997496,0,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0,0,0,3.63257826347835,5.18558332031999,2.34321431833797,3.1216007683032,2.2818872861778,1.49448680551801,8.33784940370731,6.79866366346152,7.02254033511243,0.408308342509787,0.982674538494144,0.103325781175765,0,0,0,0,0.168336113954066,0.625592599359821,0,0,0.612975591598039,0.150238058906597,0.113432183160021,3.40840307808838,10.2507546632912,5.72216133130817,3.00091096084402,5.25567899116038,2.31876486041066,4.83903826462134,2.70042131586026,2.92311015483596,7.06814567883521,7.08784219545705,0.969876340912871,5.32514388774922,5.13835700960965,3.39121184620975,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,12.2215778256648,1.38134921352481,13.4666699129274,10.1063127433742,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,8.87285243752816,29.4848165003288,4.13552934676983,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,1.34557301214433,2.61576041299968,6.08707772313885,0,0,4.22651376278,0,0,8.48784335065069,0,4.79559922228979,0.285955987316295,0,0,4.56030658011229,0,0,0,0,0,0,0,0,5.27174682081482,9.18895486672911,0,2.02693829334611,3.08214483825575,1.25342674267927,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.981531933753119,0,0.542530047399471,3.95144636908534,0.535286966391485,0.788512075169673,0.585707074963566,6.3198680942821,11.3703752027992,10.3473071292505,7.3064815838898,1.29058417979192,1.73767228936166,2.34961388955289,5.14715135716284,0,0,0,0,0,0.30239029332968,6.4508030032882,11.6631099698927,16.5589455715513,0,1.02341449813341,0,0,1.54209693802656,1.59805552781814,3.20295908453856,0,3.48631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,2.67906630284078,0.915694648183434,1.32015199872941,0,0,0,15.2739734901553,8.01052808996151,7.82868741103261,3.85942402956686,14.6091533020852,8.70100163485371,4.68746450788555,13.1767412757171,0,0,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,9.30395923399168,0.632758849437452,0.953150969619124,0,0,0,0,0.179872457583315,0.274537029736055,0,0.606547444719948,0,0.842516912477962,0,2.43713489631284,0,0,0,1.13008116620243,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0,0,0,14.9886421061342,7.90307743103764,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,4.3797869162264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,7.47191714286659,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,2.8309505256046,4.0435146396035,0,0.358042349351218,0,0.197286811273867,0,3.33410970433911,0,0.74214478529481,0,0,0.0874599999961957,1.44999915086959,0,0,0,0.344743373241465,0,2.60437492399938,0,0,0,0.110579259931225,0.591095237907095,1.53569778007781,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0.588187602953219,0.167821586975843,0,0,0.210998064528027,1.46909527343233,0,0.432777279484182,0,0.176915129006678,0,0,0,0.104421949505455,0.202203398942031,11.236087062183,0,0,0,0,0,0,0.30607276163049,6.88733717950519,0,0,0,0,0.627865836814451,0,0,0,0,0.195984794828755,0.0870592065804026,1.39781334593624,1.20390222730132,0.0967563312890851,0,0,0.484945082442097,0.353024506766001,6.77942222341597,0,0,0.189932387867636,0.586654148204409,0.240476460754601,0.213452994739353,0.39961921916426,1.29681375438695,0,1.37275998289572,2.44893156579854,0,0.471388069233591,0,0,1.93796613509011,5.77901179803038,0.600420288709789,0,0,0.859530882839914,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0.669514372325618,0,1.08089965062721,0,0.315132729228895,0.164831716762333,0.539228350833479,8.56319089178314,0,0,0.272406812223151,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.410462603746695,0.6815520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| ||
|short_description=p@chr1:119427224..119427229,- | |short_description=p@chr1:119427224..119427229,- | ||
}} | }} |
Latest revision as of 20:16, 27 July 2015
Short description: | p@chr1:119427224..119427229, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:119427224..119427229, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.51e-19 | 23 |
fibroblast | 8.87e-12 | 76 |
fat cell | 1.99e-10 | 15 |
extracellular matrix secreting cell | 4.52e-10 | 15 |
cell of skeletal muscle | 1.66e-09 | 9 |
GAG secreting cell | 3.41e-09 | 9 |
carbohydrate secreting cell | 3.41e-09 | 9 |
multi fate stem cell | 1.37e-08 | 427 |
osteoblast | 2.13e-08 | 11 |
osteoprogenitor cell | 2.13e-08 | 11 |
mesenchyme condensation cell | 2.13e-08 | 11 |
connective tissue cell | 3.07e-08 | 361 |
stromal cell | 3.58e-08 | 28 |
somatic stem cell | 4.18e-08 | 433 |
mesenchymal cell | 4.82e-08 | 354 |
motile cell | 5.43e-08 | 386 |
stem cell | 1.73e-07 | 441 |
fibroblast of dermis | 4.07e-07 | 6 |
mesenchymal stem cell of adipose | 4.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 1.81e-20 | 46 |
integumental system | 1.81e-20 | 46 |
skin of body | 1.28e-16 | 41 |
connective tissue | 5.11e-10 | 371 |
dermis | 1.15e-09 | 9 |
dermatome | 1.15e-09 | 9 |
future dermis | 1.15e-09 | 9 |
adipose tissue | 6.23e-09 | 14 |
surface structure | 1.34e-07 | 99 |
somite | 4.25e-07 | 71 |
presomitic mesoderm | 4.25e-07 | 71 |
presumptive segmental plate | 4.25e-07 | 71 |
dermomyotome | 4.25e-07 | 71 |
trunk paraxial mesoderm | 4.25e-07 | 71 |
paraxial mesoderm | 6.74e-07 | 72 |
presumptive paraxial mesoderm | 6.74e-07 | 72 |
multilaminar epithelium | 7.15e-07 | 83 |