FFCP PHASE1:Hg19::chr1:158494002..158494016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:158494002..158494016,+ | |||
|description=CAGE_peak_at_chr1:158494002..158494016,+ | |description=CAGE_peak_at_chr1:158494002..158494016,+ | ||
|id=chr1:158494002..158494016,+ | |id=chr1:158494002..158494016,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.36e-25!42;CL:0000860!1.67e-23!45;CL:0000839!3.87e-19!70;CL:0000557!1.18e-17!71;CL:0002009!2.97e-16!65;CL:0002194!4.65e-16!63;CL:0000576!4.65e-16!63;CL:0000040!4.65e-16!63;CL:0000559!4.65e-16!63;CL:0000766!1.44e-14!76;CL:0000763!2.90e-14!112;CL:0000049!2.90e-14!112;CL:0002031!1.07e-09!124;CL:0002032!1.01e-08!165;CL:0000837!1.01e-08!165;CL:0000738!1.69e-08!140;CL:0000037!3.92e-08!172;CL:0000566!3.92e-08!172;CL:0002087!1.03e-07!119;CL:0000988!7.85e-07!182 | |ontology_enrichment_celltype=CL:0002057!7.36e-25!42;CL:0000860!1.67e-23!45;CL:0000839!3.87e-19!70;CL:0000557!1.18e-17!71;CL:0002009!2.97e-16!65;CL:0002194!4.65e-16!63;CL:0000576!4.65e-16!63;CL:0000040!4.65e-16!63;CL:0000559!4.65e-16!63;CL:0000766!1.44e-14!76;CL:0000763!2.90e-14!112;CL:0000049!2.90e-14!112;CL:0002031!1.07e-09!124;CL:0002032!1.01e-08!165;CL:0000837!1.01e-08!165;CL:0000738!1.69e-08!140;CL:0000037!3.92e-08!172;CL:0000566!3.92e-08!172;CL:0002087!1.03e-07!119;CL:0000988!7.85e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.41e-26;33!CL:0002057;9.41e-26;33!CL:0000473;1.85e-22;39!CL:0000234;1.85e-22;39!CL:0000576;2.13e-12;48!CL:0000766;2.32e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.67e-21,48;CL:0000234,2.67e-21,48;CL:0000860,8.07e-21,42;CL:0002057,8.07e-21,42;CL:0000839,4.63e-17,66;CL:0000557,1.18e-16,67;CL:0002009,3.55e-16,61;CL:0002194,1.39e-15,59;CL:0000576,1.39e-15,59;CL:0000040,1.39e-15,59;CL:0000559,1.39e-15,59;CL:0000766,8.49e-14,72;CL:0000763,5.94e-13,108;CL:0000049,5.94e-13,108;CL:0002031,1.86e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.46e-14!80;UBERON:0001474!3.74e-12!86;UBERON:0004765!1.13e-11!101;UBERON:0001434!1.13e-11!101;UBERON:0001737!3.31e-11!9;UBERON:0002390!2.50e-09!102;UBERON:0003061!2.50e-09!102;UBERON:0002193!1.37e-08!112;UBERON:0002405!1.77e-08!115;UBERON:0002204!6.51e-07!167;UBERON:0001049!7.47e-07!57;UBERON:0005068!7.47e-07!57;UBERON:0006241!7.47e-07!57;UBERON:0007135!7.47e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.81e-19;9!UBERON:0001557;3.81e-19;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.41e-19,9;UBERON:0002371,8.56e-14,76;UBERON:0004765,1.88e-12,90;UBERON:0001474,3.01e-12,82;UBERON:0002405,5.87e-11,93;UBERON:0001434,1.93e-10,100;UBERON:0002390,4.29e-09,98;UBERON:0003061,4.29e-09,98;UBERON:0002193,1.94e-08,108;UBERON:0001557,5.13e-08,19;UBERON:0002204,2.82e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,6.72325146451775,6.02694528023977,8.03341099426111,7.80692478064811,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,1.01778767145695,0.755751887377619,1.69808842831471,1.39457422143411,3.28934310417461,5.88442104700697,3.74000110018796,1.7931249457037,2.12834006899727,2.41321976515633,3.87290810150296,8.12558919566051,1.50593871634084,4.91231070104122,1.79778787556068,0.918251677112708,0.962787081228281,1.27867425159808,1.31940520074686,2.99195486432448,2.13112375266347,1.7412554317715,1.13477044938228,0.622822248995575,3.51748131359441,8.86520961314342,3.04064382587163,0.605399502633369,0.736555271975129,1.26584954976354,0.422510572623884,0.637812899895131,0.209658645508376,0,0.600707571366025,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.668745981562712,0,0,0,0.557052284425868,0,0.664601683750863,0.541607727530031,0.896639238079726,0.520237390239513,2.46656856905514,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,1.85653965465393,0,0,0,1.93975268182574,0,0,0,0,0,0,0,0,0,0,6.56034212276634,0.72995471815166,0,0,0,0,0,4.96888560167344,6.06904884281166,7.71235295627142,4.19117096383097,3.7039505495709,6.64357733511071,4.85392709376592,3.53198637225623,5.00171304030308,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0.100528972411631,0,0,0,0,1.27523445472584,0.352226082707465,0,0.462985512576611,4.94660795809955,0,0,0,0,0,0,1.34385702559088,2.26840155587818,0,0,0,0,1.67292024625129,0.414656231081544,0.144119953416961,1.38866676769018,2.60341366597893,0,0,0,0,1.50171528921959,1.42913216315289,0,0,0,0,0,4.22651376278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52031382288914,14.7583757638122,0,0,2.85273810081437,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0,0,0,2.70362119990049,5.53129865271201,2.83864347061082,1.63997980989798,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,1.68808170616869,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,2.00775893085672,0.392996164052485,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,4.54470716384378,0,0,0,0,10.665382001501,0.1605880751037,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,4.32729085561573,0,0,0,0,0,0,0,2.14870036263921,0.890894042497916,0,17.8946576597934,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,7.08593108651071,0.120596438625408,6.10326945268333,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0.915975934018623,0,1.02193298195737,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,4.20294202096853,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,13.5189047267582,0,3.3758161177654,3.30094647833361,12.0477698028464,1.349843349309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04203529810047,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8352954193727,15.7413881723532,0.250381861413,9.17454713104114,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,3.31764966272684,0,1.04349012362347,0,4.95046775819434,0,0,0.107410557042488,0.464033759878494,3.18476710958893,0.400027764663154,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,0.797189041880179,1.79921933681429,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,7.08482881627925,0.319267718114302,0,0,0,0,2.85538840518309,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,11.7161714792077,0,0,0,0,0,0,0.127762427639595,3.21421101526972,0,4.85572483389305,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0.93061915699296,1.91107787795487,0.111855431797792,0,0,3.88457302312737,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,4.51509474364374,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0,0,7.46252495512901,0.206865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| ||
|short_description=p@chr1:158494002..158494016,+ | |short_description=p@chr1:158494002..158494016,+ | ||
}} | }} |
Latest revision as of 22:58, 27 July 2015
Short description: | p@chr1:158494002..158494016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:158494002..158494016, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.67e-21 | 48 |
phagocyte | 2.67e-21 | 48 |
classical monocyte | 8.07e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.07e-21 | 42 |
myeloid lineage restricted progenitor cell | 4.63e-17 | 66 |
granulocyte monocyte progenitor cell | 1.18e-16 | 67 |
macrophage dendritic cell progenitor | 3.55e-16 | 61 |
monopoietic cell | 1.39e-15 | 59 |
monocyte | 1.39e-15 | 59 |
monoblast | 1.39e-15 | 59 |
promonocyte | 1.39e-15 | 59 |
myeloid leukocyte | 8.49e-14 | 72 |
myeloid cell | 5.94e-13 | 108 |
common myeloid progenitor | 5.94e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.86e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.41e-19 | 9 |
bone marrow | 8.56e-14 | 76 |
skeletal element | 1.88e-12 | 90 |
bone element | 3.01e-12 | 82 |
immune system | 5.87e-11 | 93 |
skeletal system | 1.93e-10 | 100 |
hematopoietic system | 4.29e-09 | 98 |
blood island | 4.29e-09 | 98 |
hemolymphoid system | 1.94e-08 | 108 |
upper respiratory tract | 5.13e-08 | 19 |
musculoskeletal system | 2.82e-07 | 167 |