FFCP PHASE1:Hg19::chr1:203152849..203152863,-: Difference between revisions
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|id=chr1:203152849..203152863,-
|short_description=p@chr1:203152849..203152863,-
|description=CAGE_peak_at_chr1:203152849..203152863,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:203152849..203152863,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203152849..203152863,- | |||
|id=chr1:203152849..203152863,- | |||
|ontology_enrichment_celltype=CL:0000153!1.52e-16!9;CL:0000447!1.52e-16!9;CL:0000667!1.04e-11!6;CL:0000058!1.04e-11!6;CL:0000138!1.04e-11!6;CL:0000327!2.21e-10!14;CL:0000499!7.56e-09!27;CL:0002540!5.61e-07!6;CL:0000135!8.84e-07!3;CL:0000386!8.84e-07!3;CL:0000388!8.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.19e-25;9!CL:0000447;1.19e-25;9!CL:0000138;5.21e-22;6!CL:0000135;4.88e-20;3!CL:0000388;4.88e-20;3!CL:0000499;4.15e-18;28!CL:0000327;1.52e-15;15!CL:0000182;3.30e-11;12!CL:0002540;1.73e-10;6!CL:0000235;2.04e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.12e-25,9;CL:0000447,1.12e-25,9;CL:0000058,4.68e-22,6;CL:0000138,4.68e-22,6;CL:0000135,3.66e-20,3;CL:0000388,3.66e-20,3;CL:0000499,3.68e-18,28;CL:0000327,1.47e-15,15;CL:0000182,3.48e-11,12;CL:0002540,1.57e-10,6;CL:0000235,2.29e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.42e-12;11!UBERON:0009497;2.58e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.38e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.38e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0002148!9.57e-09!2;UBERON:0009662!9.57e-09!2;UBERON:0002308!6.08e-07!9;UBERON:0000125!6.08e-07!9;UBERON:0000043!8.84e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.88e-20;3!UBERON:0000043;4.88e-20;3!UBERON:0007845;4.88e-20;3!UBERON:0001282;2.38e-15;1!UBERON:0009842;2.38e-15;1!UBERON:0003704;2.38e-15;1!UBERON:0001171;2.38e-15;1!UBERON:0001172;2.38e-15;1!UBERON:0002107;3.65e-12;19!UBERON:0006925;3.65e-12;19!UBERON:0002423;2.61e-09;25!UBERON:0002365;1.70e-07;31!UBERON:0002330;1.70e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.66e-20,3;UBERON:0000043,3.66e-20,3;UBERON:0007845,3.66e-20,3;UBERON:0001282,3.66e-15,1;UBERON:0009842,3.66e-15,1;UBERON:0003704,3.66e-15,1;UBERON:0001171,3.66e-15,1;UBERON:0001172,3.66e-15,1;UBERON:0002107,4.04e-12,19;UBERON:0006925,4.04e-12,19;UBERON:0008836,4.04e-12,19;UBERON:0008835,1.66e-10,22;UBERON:0003894,1.66e-10,22;UBERON:0009854,4.63e-10,23;UBERON:0007499,2.82e-09,25;UBERON:0009497,2.82e-09,25;UBERON:0000015,2.82e-09,25;UBERON:0002423,2.82e-09,25;UBERON:0006235,2.82e-09,25;UBERON:0004161,2.82e-09,25;UBERON:0009856,6.27e-09,26;UBERON:0002365,1.59e-07,31;UBERON:0002330,1.59e-07,31 | |||
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| ||
|short_description=p@chr1:203152849..203152863,- | |||
}} | }} |
Latest revision as of 02:24, 28 July 2015
Short description: | p@chr1:203152849..203152863, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152849..203152863, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.12e-25 | 9 |
carbohydrate secreting cell | 1.12e-25 | 9 |
chondroblast | 4.68e-22 | 6 |
chondrocyte | 4.68e-22 | 6 |
fibrocyte | 3.66e-20 | 3 |
tendon cell | 3.66e-20 | 3 |
stromal cell | 3.68e-18 | 28 |
extracellular matrix secreting cell | 1.47e-15 | 15 |
hepatocyte | 3.48e-11 | 12 |
mesenchymal stem cell of the bone marrow | 1.57e-10 | 6 |
macrophage | 2.29e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.66e-20 | 3 |
tendon | 3.66e-20 | 3 |
regular connective tissue | 3.66e-20 | 3 |
intralobular bile duct | 3.66e-15 | 1 |
acinus | 3.66e-15 | 1 |
intrahepatic bile duct | 3.66e-15 | 1 |
portal lobule | 3.66e-15 | 1 |
hepatic acinus | 3.66e-15 | 1 |
liver | 4.04e-12 | 19 |
digestive gland | 4.04e-12 | 19 |
liver bud | 4.04e-12 | 19 |
hepatic diverticulum | 1.66e-10 | 22 |
liver primordium | 1.66e-10 | 22 |
digestive tract diverticulum | 4.63e-10 | 23 |
epithelial sac | 2.82e-09 | 25 |
epithelium of foregut-midgut junction | 2.82e-09 | 25 |
anatomical boundary | 2.82e-09 | 25 |
hepatobiliary system | 2.82e-09 | 25 |
foregut-midgut junction | 2.82e-09 | 25 |
septum transversum | 2.82e-09 | 25 |
sac | 6.27e-09 | 26 |
exocrine gland | 1.59e-07 | 31 |
exocrine system | 1.59e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.38e-15 | 1 |