FFCP PHASE1:Hg19::chr1:2232583..2232594,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:2232583..2232594,- | |||
|coexpression_cluster_id=C1238 | |coexpression_cluster_id=C1238 | ||
|description=CAGE_peak_at_chr1:2232583..2232594,- | |description=CAGE_peak_at_chr1:2232583..2232594,- | ||
|id=chr1:2232583..2232594,- | |id=chr1:2232583..2232594,- | ||
|ontology_enrichment_celltype=CL:0000738!1.17e-47!140;CL:0000037!1.10e-42!172;CL:0000566!1.10e-42!172;CL:0000988!2.50e-39!182;CL:0002031!5.51e-38!124;CL:0002087!5.91e-37!119;CL:0002032!5.27e-34!165;CL:0000837!5.27e-34!165;CL:0002057!4.09e-25!42;CL:0000766!1.57e-24!76;CL:0000557!5.51e-23!71;CL:0000860!6.00e-23!45;CL:0000839!7.34e-22!70;CL:0002009!5.69e-19!65;CL:0000763!7.19e-19!112;CL:0000049!7.19e-19!112;CL:0002194!2.62e-18!63;CL:0000576!2.62e-18!63;CL:0000040!2.62e-18!63;CL:0000559!2.62e-18!63;CL:0002393!2.54e-15!9;CL:0002397!2.54e-15!9;CL:0000134!3.36e-15!358;CL:0000838!9.29e-15!52;CL:0002320!1.49e-14!365;CL:0000542!2.31e-14!53;CL:0000051!2.31e-14!53;CL:0000624!1.42e-13!6;CL:0000219!2.79e-12!390;CL:0000084!5.95e-12!25;CL:0000827!5.95e-12!25;CL:0000791!7.23e-11!18;CL:0000789!7.23e-11!18;CL:0002420!7.23e-11!18;CL:0002419!7.23e-11!18;CL:0000790!7.23e-11!18;CL:0000034!1.67e-10!444;CL:0000048!3.69e-10!430;CL:0000723!9.03e-10!436;CL:0000623!3.18e-08!3;CL:0000825!3.18e-08!3;CL:0000767!6.47e-08!3;CL:0000842!1.18e-07!3;CL:0000784!1.24e-07!3;CL:0000898!1.35e-07!3;CL:0002274!2.96e-07!5;CL:0000457!2.96e-07!5;CL:0002191!2.96e-07!5;CL:0000097!2.96e-07!5;CL:0000831!2.96e-07!5;CL:0002028!2.96e-07!5 | |ontology_enrichment_celltype=CL:0000738!1.17e-47!140;CL:0000037!1.10e-42!172;CL:0000566!1.10e-42!172;CL:0000988!2.50e-39!182;CL:0002031!5.51e-38!124;CL:0002087!5.91e-37!119;CL:0002032!5.27e-34!165;CL:0000837!5.27e-34!165;CL:0002057!4.09e-25!42;CL:0000766!1.57e-24!76;CL:0000557!5.51e-23!71;CL:0000860!6.00e-23!45;CL:0000839!7.34e-22!70;CL:0002009!5.69e-19!65;CL:0000763!7.19e-19!112;CL:0000049!7.19e-19!112;CL:0002194!2.62e-18!63;CL:0000576!2.62e-18!63;CL:0000040!2.62e-18!63;CL:0000559!2.62e-18!63;CL:0002393!2.54e-15!9;CL:0002397!2.54e-15!9;CL:0000134!3.36e-15!358;CL:0000838!9.29e-15!52;CL:0002320!1.49e-14!365;CL:0000542!2.31e-14!53;CL:0000051!2.31e-14!53;CL:0000624!1.42e-13!6;CL:0000219!2.79e-12!390;CL:0000084!5.95e-12!25;CL:0000827!5.95e-12!25;CL:0000791!7.23e-11!18;CL:0000789!7.23e-11!18;CL:0002420!7.23e-11!18;CL:0002419!7.23e-11!18;CL:0000790!7.23e-11!18;CL:0000034!1.67e-10!444;CL:0000048!3.69e-10!430;CL:0000723!9.03e-10!436;CL:0000623!3.18e-08!3;CL:0000825!3.18e-08!3;CL:0000767!6.47e-08!3;CL:0000842!1.18e-07!3;CL:0000784!1.24e-07!3;CL:0000898!1.35e-07!3;CL:0002274!2.96e-07!5;CL:0000457!2.96e-07!5;CL:0002191!2.96e-07!5;CL:0000097!2.96e-07!5;CL:0000831!2.96e-07!5;CL:0002028!2.96e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.17e-28;6!CL:0002397;2.17e-28;6!CL:0000624;1.09e-19;6!CL:0000791;1.11e-15;18!CL:0000789;1.11e-15;18!CL:0002419;1.11e-15;18!CL:0000623;1.64e-15;3!CL:0000767;6.15e-15;3!CL:0000226;1.69e-14;3!CL:0000842;1.69e-14;3!CL:0000084;6.19e-11;25!CL:0000542;2.68e-09;53!CL:0000898;1.48e-07;3!CL:0000784;2.43e-07;3!CL:0002087;3.49e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.10e-30,136;CL:0000037,2.71e-23,168;CL:0000988,9.41e-22,177;CL:0002087,2.11e-21,115;CL:0000624,1.39e-19,6;CL:0002031,1.33e-18,120;CL:0002393,1.75e-18,9;CL:0002397,1.75e-18,9;CL:0002032,1.58e-16,161;CL:0000837,1.58e-16,161;CL:0000623,1.29e-15,3;CL:0000825,1.29e-15,3;CL:0000791,1.58e-15,18;CL:0000789,1.58e-15,18;CL:0002420,1.58e-15,18;CL:0002419,1.58e-15,18;CL:0000790,1.58e-15,18;CL:0000767,5.75e-15,3;CL:0000838,8.85e-15,52;CL:0000542,1.92e-14,53;CL:0000051,1.92e-14,53;CL:0000226,2.05e-14,3;CL:0000842,2.05e-14,3;CL:0000084,7.92e-11,25;CL:0000827,7.92e-11,25;CL:0000766,1.35e-09,72;CL:0000898,1.53e-07,3;CL:0000784,1.92e-07,3;CL:0000134,2.31e-07,354;CL:0002320,4.37e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-15;18!CL:0000051;2.68e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.69e-24!102;UBERON:0003061!1.69e-24!102;UBERON:0002371!3.10e-22!80;UBERON:0002193!2.80e-21!112;UBERON:0001474!5.18e-20!86;UBERON:0002405!1.27e-16!115;UBERON:0004765!1.23e-15!101;UBERON:0001434!1.23e-15!101;UBERON:0002384!1.14e-13!375;UBERON:0003081!9.99e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!1.69e-24!102;UBERON:0003061!1.69e-24!102;UBERON:0002371!3.10e-22!80;UBERON:0002193!2.80e-21!112;UBERON:0001474!5.18e-20!86;UBERON:0002405!1.27e-16!115;UBERON:0004765!1.23e-15!101;UBERON:0001434!1.23e-15!101;UBERON:0002384!1.14e-13!375;UBERON:0003081!9.99e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.29e-07,98;UBERON:0003061,2.29e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.53531759238885,2.63187409637329,0,0,0,0,0,0.293600439334847,4.43196326825502,5.01361118675354,4.99125002646459,0,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0.674170453335254,0,0.320929027076094,0,0,0,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0,0.65156653411535,0,0.368277635987565,0.316462387440884,1.05627643155971,1.06302149982522,1.25795187305026,1.46027220490444,0.300353785683013,0,0,0.99458338599545,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,1.70763890732835,1.76171156811282,0.764546456250458,2.64342657158052,2.24203425192614,0,2.360517241366,1.17903228824749,1.64481199199607,0,3.2592226663359,3.78758244587787,1.94826728407911,0.111410456885174,0.294605907474837,1.10766947291811,0,0.384273959177026,0.390178042679635,0,0,0,5.04174314751005,3.21048993707656,1.04535523804977,0,3.06576394881537,1.71813722741315,1.77113784413652,0,0,0.950452044448374,0,0,0,0,0,3.02410114837099,1.06976078313403,2.46201486600758,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,1.90792499444274,4.0039643754609,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,1.65862492432618,4.17947864909188,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,3.66566877261179,4.36366323351144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.53531759238885,2.63187409637329,0,0,0,0,0,0.293600439334847,4.43196326825502,5.01361118675354,4.99125002646459,0,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0.674170453335254,0,0.320929027076094,0,0,0,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0,0.65156653411535,0,0.368277635987565,0.316462387440884,1.05627643155971,1.06302149982522,1.25795187305026,1.46027220490444,0.300353785683013,0,0,0.99458338599545,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,1.70763890732835,1.76171156811282,0.764546456250458,2.64342657158052,2.24203425192614,0,2.360517241366,1.17903228824749,1.64481199199607,0,3.2592226663359,3.78758244587787,1.94826728407911,0.111410456885174,0.294605907474837,1.10766947291811,0,0.384273959177026,0.390178042679635,0,0,0,5.04174314751005,3.21048993707656,1.04535523804977,0,3.06576394881537,1.71813722741315,1.77113784413652,0,0,0.950452044448374,0,0,0,0,0,3.02410114837099,1.06976078313403,2.46201486600758,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,1.90792499444274,4.0039643754609,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,1.65862492432618,4.17947864909188,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,3.66566877261179,4.36366323351144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr1:2232583..2232594,- | |short_description=p@chr1:2232583..2232594,- | ||
}} | }} |
Latest revision as of 04:17, 28 July 2015
Short description: | p@chr1:2232583..2232594, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2232583..2232594, - |
Coexpression cluster: | C1238_CD34_CD14_Eosinophils_CD8_Natural_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.10e-30 | 136 |
hematopoietic stem cell | 2.71e-23 | 168 |
hematopoietic cell | 9.41e-22 | 177 |
nongranular leukocyte | 2.11e-21 | 115 |
CD4-positive, alpha-beta T cell | 1.39e-19 | 6 |
hematopoietic lineage restricted progenitor cell | 1.33e-18 | 120 |
intermediate monocyte | 1.75e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.75e-18 | 9 |
hematopoietic oligopotent progenitor cell | 1.58e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-16 | 161 |
natural killer cell | 1.29e-15 | 3 |
pro-NK cell | 1.29e-15 | 3 |
mature alpha-beta T cell | 1.58e-15 | 18 |
alpha-beta T cell | 1.58e-15 | 18 |
immature T cell | 1.58e-15 | 18 |
mature T cell | 1.58e-15 | 18 |
immature alpha-beta T cell | 1.58e-15 | 18 |
basophil | 5.75e-15 | 3 |
lymphoid lineage restricted progenitor cell | 8.85e-15 | 52 |
lymphocyte | 1.92e-14 | 53 |
common lymphoid progenitor | 1.92e-14 | 53 |
single nucleate cell | 2.05e-14 | 3 |
mononuclear cell | 2.05e-14 | 3 |
T cell | 7.92e-11 | 25 |
pro-T cell | 7.92e-11 | 25 |
myeloid leukocyte | 1.35e-09 | 72 |
naive T cell | 1.53e-07 | 3 |
plasmacytoid dendritic cell | 1.92e-07 | 3 |
mesenchymal cell | 2.31e-07 | 354 |
connective tissue cell | 4.37e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.29e-07 | 98 |
blood island | 2.29e-07 | 98 |