FFCP PHASE1:Hg19::chr1:27192983..27192986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27192983..27192986,+ | |||
|description=CAGE_peak_at_chr1:27192983..27192986,+ | |description=CAGE_peak_at_chr1:27192983..27192986,+ | ||
|id=chr1:27192983..27192986,+ | |id=chr1:27192983..27192986,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.42e-12!254;CL:0000945!7.82e-08!24;CL:0000826!7.82e-08!24 | |ontology_enrichment_celltype=CL:0000066!4.42e-12!254;CL:0000945!7.82e-08!24;CL:0000826!7.82e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.30e-26;2!CL:0001016;6.30e-26;2!CL:0000453;3.10e-11;5!CL:0000235;1.38e-09;6!CL:0000840;1.38e-09;5!CL:0000990;8.14e-07;8 | |ontology_enrichment_celltype_v019=CL:0001014;6.30e-26;2!CL:0001016;6.30e-26;2!CL:0000453;3.10e-11;5!CL:0000235;1.38e-09;6!CL:0000840;1.38e-09;5!CL:0000990;8.14e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.56e-26,2;CL:0001016,5.56e-26,2;CL:0000453,2.94e-11,5;CL:0000840,1.32e-09,5;CL:0001029,1.32e-09,5;CL:0000235,1.44e-09,6;CL:0000990,7.91e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.66e-24!106;DOID:0050687!2.92e-17!143;DOID:162!1.04e-12!235;DOID:14566!4.12e-12!239;DOID:1749!2.21e-07!14 | |ontology_enrichment_disease=DOID:305!2.66e-24!106;DOID:0050687!2.92e-17!143;DOID:162!1.04e-12!235;DOID:14566!4.12e-12!239;DOID:1749!2.21e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4556;8.69e-18;3!DOID:1749;3.41e-15;14!DOID:3908;3.10e-11;5!DOID:3905;8.14e-07;9 | |ontology_enrichment_disease_v019=DOID:4556;8.69e-18;3!DOID:1749;3.41e-15;14!DOID:3908;3.10e-11;5!DOID:3905;8.14e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,6.76e-18,3;DOID:1749,3.41e-15,14;DOID:3908,2.66e-11,5;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-10!169;UBERON:0000925!1.92e-10!169;UBERON:0006595!1.92e-10!169;UBERON:0001007!3.89e-08!155;UBERON:0001555!3.89e-08!155;UBERON:0007026!3.89e-08!155;UBERON:0000077!1.51e-07!130;UBERON:0001004!5.67e-07!72 | |ontology_enrichment_uberon=UBERON:0004119!1.92e-10!169;UBERON:0000925!1.92e-10!169;UBERON:0006595!1.92e-10!169;UBERON:0001007!3.89e-08!155;UBERON:0001555!3.89e-08!155;UBERON:0007026!3.89e-08!155;UBERON:0000077!1.51e-07!130;UBERON:0001004!5.67e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.10e-50;1!UBERON:0005056;3.10e-50;1!UBERON:0004176;3.10e-50;1 | |ontology_enrichment_uberon_v019=UBERON:0000997;3.10e-50;1!UBERON:0005056;3.10e-50;1!UBERON:0004176;3.10e-50;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.58e-50,1;UBERON:0005056,6.58e-50,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,1.07791637155815,0.435296032902013,0,0,0.387025325156341,0.146178634172371,0.574808199372465,0,0,0,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0.0524545881349981,0,0,1.72723677587501,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.407016343054873,0.213454691755431,0,0,0,0,0,0.665756774185513,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,1.07791637155815,0.435296032902013,0,0,0.387025325156341,0.146178634172371,0.574808199372465,0,0,0,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0.0524545881349981,0,0,1.72723677587501,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.407016343054873,0.213454691755431,0,0,0,0,0,0.665756774185513,0,0.320568492303233 | ||
|short_description=p@chr1:27192983..27192986,+ | |short_description=p@chr1:27192983..27192986,+ | ||
}} | }} |
Latest revision as of 06:42, 28 July 2015
Short description: | p@chr1:27192983..27192986, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27192983..27192986, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.56e-26 | 2 |
immature CD1a-positive Langerhans cell | 5.56e-26 | 2 |
Langerhans cell | 2.94e-11 | 5 |
immature conventional dendritic cell | 1.32e-09 | 5 |
common dendritic progenitor | 1.32e-09 | 5 |
macrophage | 1.44e-09 | 6 |
conventional dendritic cell | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.58e-50 | 1 |
external female genitalia | 6.58e-50 | 1 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.76e-18 | 3 |
squamous cell carcinoma | 3.41e-15 | 14 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
lung carcinoma | 7.48e-07 | 9 |