FFCP PHASE1:Hg19::chr1:46649969..46649981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:46649969..46649981,+ | |||
|description=CAGE_peak_at_chr1:46649969..46649981,+ | |description=CAGE_peak_at_chr1:46649969..46649981,+ | ||
|id=chr1:46649969..46649981,+ | |id=chr1:46649969..46649981,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.14e-25!43;CL:0002368!1.82e-19!13;CL:0000066!2.69e-19!254;CL:0000223!7.08e-18!59;CL:0002202!1.81e-13!9;CL:0002632!1.81e-13!9;CL:0002328!3.13e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.14e-25!43;CL:0002368!1.82e-19!13;CL:0000066!2.69e-19!254;CL:0000223!7.08e-18!59;CL:0002202!1.81e-13!9;CL:0002632!1.81e-13!9;CL:0002328!3.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.37e-16;3!CL:0002368;1.11e-14;13!CL:0000313;4.48e-13;1!CL:0002202;2.55e-12;9!CL:0002632;2.55e-12;9!CL:0000159;3.59e-07;2!CL:0000575;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,6.22e-17,3;CL:0002368,8.67e-15,13;CL:0000313,1.09e-12,1;CL:0002202,1.91e-12,9;CL:0002632,1.91e-12,9;CL:0000575,3.93e-07,2;CL:0000223,5.32e-07,58;CL:0000159,5.60e-07,2;CL:0002076,5.62e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.07e-13!106;DOID:1749!1.02e-11!14;DOID:0050687!5.41e-09!143;DOID:299!2.16e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.48e-13;1!DOID:4074;3.59e-07;2!DOID:4905;3.59e-07;2!DOID:4468;3.59e-07;2!DOID:3498;3.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.09e-12,1;DOID:4074,2.74e-07,2;DOID:4905,2.74e-07,2;DOID:3498,2.74e-07,2;DOID:4468,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000065!5.41e-14!53;UBERON:0004119!2.71e-13!169;UBERON:0000925!2.71e-13!169;UBERON:0006595!2.71e-13!169;UBERON:0007196!5.57e-13!14;UBERON:0001558!5.57e-13!14;UBERON:0001004!7.83e-12!72;UBERON:0001007!1.97e-11!155;UBERON:0001555!1.97e-11!155;UBERON:0007026!1.97e-11!155;UBERON:0005178!4.07e-11!34;UBERON:0002224!4.07e-11!34;UBERON:0005181!1.12e-10!35;UBERON:0005153!1.28e-10!37;UBERON:0008947!1.35e-10!38;UBERON:0003258!1.35e-10!38;UBERON:0005157!8.88e-10!51;UBERON:0004921!1.29e-09!129;UBERON:0004185!1.29e-09!129;UBERON:0000072!1.09e-08!46;UBERON:0000464!6.82e-08!104;UBERON:0003126!2.71e-07!7;UBERON:0001005!2.71e-07!7;UBERON:0004815!3.13e-07!3;UBERON:0002031!3.13e-07!3;UBERON:0002048!4.51e-07!22;UBERON:0000117!4.51e-07!22;UBERON:0000171!4.51e-07!22;UBERON:0000170!4.51e-07!22;UBERON:0005597!4.51e-07!22;UBERON:0000118!4.51e-07!22;UBERON:0005911!6.43e-07!82;UBERON:0005177!7.69e-07!107;UBERON:0000077!9.01e-07!130;UBERON:0000915!9.93e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.37e-16;3!UBERON:0002031;1.37e-16;3!UBERON:0004911;4.48e-13;1!UBERON:0002171;4.48e-13;1!UBERON:0006518;4.48e-13;1!UBERON:0008949;4.48e-13;1!UBERON:0000101;4.48e-13;1!UBERON:0002167;4.48e-13;1!UBERON:0007196;9.25e-13;15!UBERON:0001558;9.25e-13;15!UBERON:0002185;2.46e-10;5!UBERON:0003126;1.25e-07;7!UBERON:0000485;1.25e-07;7!UBERON:0001005;1.25e-07;7!UBERON:0005178;1.60e-07;34!UBERON:0002224;1.60e-07;34!UBERON:0000065;3.51e-07;44!UBERON:0003127;3.59e-07;2!UBERON:0000341;3.59e-07;2!UBERON:0004909;3.59e-07;2!UBERON:0005181;4.01e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.22e-17,3;UBERON:0002031,6.22e-17,3;UBERON:0002171,2.95e-13,1;UBERON:0006518,2.95e-13,1;UBERON:0008949,2.95e-13,1;UBERON:0000101,2.95e-13,1;UBERON:0002167,2.95e-13,1;UBERON:0007196,6.21e-13,15;UBERON:0001558,6.21e-13,15;UBERON:0004911,1.09e-12,1;UBERON:0002185,1.54e-10,5;UBERON:0005178,1.14e-08,34;UBERON:0002224,1.14e-08,34;UBERON:0005181,2.03e-08,35;UBERON:0008947,9.60e-08,38;UBERON:0003258,9.60e-08,38;UBERON:0003126,1.13e-07,7;UBERON:0001005,1.13e-07,7;UBERON:0000065,1.54e-07,54;UBERON:0003127,2.58e-07,2;UBERON:0000341,4.42e-07,2;UBERON:0004909,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.768251997860379,0,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.567100388969546,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,0.0920809889358963,0,0,0,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,1.34533047155574,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0,0.921482106297696,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.489698424477443,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.195984794828755,0.174118413160805,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0.335434687599266,0.945668487590378,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,1.00669888618013,0,0.609589624911347,0,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0.437119121007915,5.17349025997675,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.240724100067505,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,1.0661699095049,0.476128862927481,0,0.0620747142958579,0,0.509177266225319,0,0,0,0.134704106029175,1.79305513481691,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.768251997860379,0,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.567100388969546,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,0.0920809889358963,0,0,0,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,1.34533047155574,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0,0.921482106297696,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.489698424477443,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.195984794828755,0.174118413160805,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0.335434687599266,0.945668487590378,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,1.00669888618013,0,0.609589624911347,0,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0.437119121007915,5.17349025997675,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.240724100067505,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,1.0661699095049,0.476128862927481,0,0.0620747142958579,0,0.509177266225319,0,0,0,0.134704106029175,1.79305513481691,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:46649969..46649981,+ | |short_description=p@chr1:46649969..46649981,+ | ||
}} | }} |
Latest revision as of 08:46, 28 July 2015
Short description: | p@chr1:46649969..46649981, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:46649969..46649981, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 6.22e-17 | 3 |
respiratory epithelial cell | 8.67e-15 | 13 |
serous secreting cell | 1.09e-12 | 1 |
epithelial cell of tracheobronchial tree | 1.91e-12 | 9 |
epithelial cell of lower respiratory tract | 1.91e-12 | 9 |
corneal epithelial cell | 3.93e-07 | 2 |
endodermal cell | 5.32e-07 | 58 |
seromucus secreting cell | 5.60e-07 | 2 |
endo-epithelial cell | 5.62e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.22e-17 | 3 |
epithelium of bronchus | 6.22e-17 | 3 |
lower lobe of right lung | 2.95e-13 | 1 |
right lung lobe | 2.95e-13 | 1 |
lower lobe of lung | 2.95e-13 | 1 |
lobe of lung | 2.95e-13 | 1 |
right lung | 2.95e-13 | 1 |
tracheobronchial tree | 6.21e-13 | 15 |
lower respiratory tract | 6.21e-13 | 15 |
epithelium of female gonad | 1.09e-12 | 1 |
bronchus | 1.54e-10 | 5 |
thoracic cavity element | 1.14e-08 | 34 |
thoracic cavity | 1.14e-08 | 34 |
thoracic segment organ | 2.03e-08 | 35 |
respiratory primordium | 9.60e-08 | 38 |
endoderm of foregut | 9.60e-08 | 38 |
trachea | 1.13e-07 | 7 |
respiratory airway | 1.13e-07 | 7 |
respiratory tract | 1.54e-07 | 54 |
open tracheal system trachea | 2.58e-07 | 2 |
throat | 4.42e-07 | 2 |
epithelium of gonad | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.09e-12 | 1 |
pancreas adenocarcinoma | 2.74e-07 | 2 |
pancreatic carcinoma | 2.74e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.74e-07 | 2 |
clear cell adenocarcinoma | 4.98e-07 | 2 |