FFCP PHASE1:Hg19::chr1:56962213..56962224,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:56962213..56962224,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56962213..56962224,- | |||
|id=chr1:56962213..56962224,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;2.22e-23;3!CL:0000135;2.63e-23;3!CL:0000388;2.63e-23;3!CL:0000153;2.61e-17;9!CL:0000447;2.61e-17;9!CL:0000499;5.53e-15;28!CL:0000327;1.21e-10;15!CL:0002615;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.35e-23,3;CL:0000214,2.35e-23,3;CL:0000388,2.35e-23,3;CL:0000153,2.99e-17,9;CL:0000447,2.99e-17,9;CL:0000499,5.78e-15,28;CL:0000327,1.31e-10,15;CL:0002615,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.03e-17;1!UBERON:0007297;1.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.26e-14!115;UBERON:0000475!6.19e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.22e-23;3!UBERON:0007616;2.22e-23;3!UBERON:0002217;2.22e-23;3!UBERON:0002018;2.22e-23;3!UBERON:0007846;2.63e-23;3!UBERON:0000043;2.63e-23;3!UBERON:0007845;2.63e-23;3!UBERON:0000998;1.03e-17;1!UBERON:0006868;1.03e-17;1!UBERON:0004457;1.82e-17;9!UBERON:0000042;1.82e-17;9!UBERON:0004905;2.20e-09;8!UBERON:0000982;2.20e-09;8!UBERON:0004770;2.20e-09;8!UBERON:0002114;9.11e-07;2!UBERON:0006947;9.11e-07;3!UBERON:0004054;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.35e-23,3;UBERON:0006915,2.35e-23,3;UBERON:0007616,2.35e-23,3;UBERON:0000043,2.35e-23,3;UBERON:0007845,2.35e-23,3;UBERON:0002217,2.35e-23,3;UBERON:0002018,2.35e-23,3;UBERON:0000998,8.72e-18,1;UBERON:0006868,8.72e-18,1;UBERON:0004457,3.00e-13,12;UBERON:0000042,3.00e-13,12;UBERON:0004905,2.25e-09,8;UBERON:0000982,2.25e-09,8;UBERON:0004770,2.25e-09,8;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,3.00219895059391,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,1.01392563272577,0,0,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,1.42003837006646,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,1.32687795048244,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,2.32218398827431,5.59801318031833,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0.573409195690071,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,2.60396512716726,3.69740502905135,0.865253124247578,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:56962213..56962224,- | |||
}} |
Latest revision as of 09:18, 28 July 2015
Short description: | p@chr1:56962213..56962224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56962213..56962224, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.35e-23 | 3 |
synovial cell | 2.35e-23 | 3 |
tendon cell | 2.35e-23 | 3 |
GAG secreting cell | 2.99e-17 | 9 |
carbohydrate secreting cell | 2.99e-17 | 9 |
stromal cell | 5.78e-15 | 28 |
extracellular matrix secreting cell | 1.31e-10 | 15 |
adipocyte of omentum tissue | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.35e-23 | 3 |
stratified squamous epithelium | 2.35e-23 | 3 |
layer of synovial tissue | 2.35e-23 | 3 |
tendon | 2.35e-23 | 3 |
regular connective tissue | 2.35e-23 | 3 |
synovial joint | 2.35e-23 | 3 |
synovial membrane of synovial joint | 2.35e-23 | 3 |
seminal vesicle | 8.72e-18 | 1 |
seminal fluid secreting gland | 8.72e-18 | 1 |
cavity lining | 3.00e-13 | 12 |
serous membrane | 3.00e-13 | 12 |
articulation | 2.25e-09 | 8 |
skeletal joint | 2.25e-09 | 8 |
articular system | 2.25e-09 | 8 |
male genital duct | 8.62e-07 | 3 |
internal male genitalia | 8.62e-07 | 3 |
duodenum | 9.64e-07 | 2 |