FFCP PHASE1:Hg19::chr1:8585424..8585441,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:8585424..8585441,+ | |||
|coexpression_cluster_id=C104 | |coexpression_cluster_id=C104 | ||
|description=CAGE_peak_at_chr1:8585424..8585441,+ | |description=CAGE_peak_at_chr1:8585424..8585441,+ | ||
|id=chr1:8585424..8585441,+ | |id=chr1:8585424..8585441,+ | ||
|ontology_enrichment_celltype=CL:0000624;7.41e-38;6!CL:0000791;6.25e-24;18!CL:0000789;6.25e-24;18!CL:0002419;6.25e-24;18!CL:0000097;2.82e-17;5!CL:0000084;4.77e-17;25!CL:0000226;7.40e-13;3!CL:0000898;7.40e-13;3!CL:0000842;7.40e-13;3!CL:0000895;2.87e-10;1!CL:0000163;7.64e-10;9!CL:0000542;2.81e-08;53 | |ontology_enrichment_celltype=CL:0000738!6.07e-16!140;CL:0000791!3.36e-15!18;CL:0000789!3.36e-15!18;CL:0002420!3.36e-15!18;CL:0002419!3.36e-15!18;CL:0000790!3.36e-15!18;CL:0000838!9.19e-15!52;CL:0000542!2.53e-14!53;CL:0000051!2.53e-14!53;CL:0002031!2.41e-12!124;CL:0000037!3.65e-12!172;CL:0000566!3.65e-12!172;CL:0002087!1.31e-11!119;CL:0000988!1.15e-10!182;CL:0000624!1.79e-10!6;CL:0002393!7.88e-10!9;CL:0002397!7.88e-10!9;CL:0000084!9.53e-10!25;CL:0000827!9.53e-10!25;CL:0002032!1.24e-09!165;CL:0000837!1.24e-09!165;CL:0000625!3.09e-08!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000624;7.41e-38;6!CL:0000791;6.25e-24;18!CL:0000789;6.25e-24;18!CL:0002419;6.25e-24;18!CL:0000097;2.82e-17;5!CL:0000084;4.77e-17;25!CL:0000226;7.40e-13;3!CL:0000898;7.40e-13;3!CL:0000842;7.40e-13;3!CL:0000895;2.87e-10;1!CL:0000163;7.64e-10;9!CL:0000542;2.81e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,5.07e-38,6;CL:0000791,6.71e-24,18;CL:0000789,6.71e-24,18;CL:0002420,6.71e-24,18;CL:0002419,6.71e-24,18;CL:0000790,6.71e-24,18;CL:0000097,2.60e-17,5;CL:0002028,2.60e-17,5;CL:0000084,5.02e-17,25;CL:0000827,5.02e-17,25;CL:0000898,6.17e-13,3;CL:0000838,7.50e-13,52;CL:0000226,8.35e-13,3;CL:0000842,8.35e-13,3;CL:0000542,1.38e-12,53;CL:0000051,1.38e-12,53;CL:0000738,2.22e-12,136;CL:0002031,1.52e-10,120;CL:0000810,2.08e-10,1;CL:0000895,2.08e-10,1;CL:0002436,2.08e-10,1;CL:0002427,2.08e-10,1;CL:0002428,2.08e-10,1;CL:0002429,2.08e-10,1;CL:0002433,2.08e-10,1;CL:0002431,2.08e-10,1;CL:0002432,2.08e-10,1;CL:0000163,7.31e-10,9;CL:0000037,1.47e-09,168;CL:0002087,3.08e-09,115;CL:0000988,6.03e-09,177;CL:0002032,2.50e-07,161;CL:0000837,2.50e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.25e-24;18!CL:0002427;2.87e-10;1!CL:0000051;2.81e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0.387336002901508,0.426507697462265,0.880801318004542,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.628975936525128,0.673971786878971,0.300353785683013,0.16072558669708,1.42506371870624,0.39783335439818,0.365328307529268,1.75996244461323,0.546138611262131,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0.382273228125229,2.64342657158052,0,0.790152254325231,4.32761494250433,2.75107533924415,2.67281948699362,0.167186495390678,1.30368906653436,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,3.55887751588945,3.74557159325598,5.22677619024884,0.226618685395132,1.53288197440768,1.03088233644789,2.53019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,1.00803371612366,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,3.52457796419313,18.0149941771202,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.72502059887614,0.77005821767849,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.50999940573032,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.482259445395058,0.412618309791701,0,0.2249738915515,0.77380195455795,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0.387336002901508,0.426507697462265,0.880801318004542,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.628975936525128,0.673971786878971,0.300353785683013,0.16072558669708,1.42506371870624,0.39783335439818,0.365328307529268,1.75996244461323,0.546138611262131,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0.382273228125229,2.64342657158052,0,0.790152254325231,4.32761494250433,2.75107533924415,2.67281948699362,0.167186495390678,1.30368906653436,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,3.55887751588945,3.74557159325598,5.22677619024884,0.226618685395132,1.53288197440768,1.03088233644789,2.53019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,1.00803371612366,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,3.52457796419313,18.0149941771202,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.72502059887614,0.77005821767849,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.50999940573032,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.482259445395058,0.412618309791701,0,0.2249738915515,0.77380195455795,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:8585424..8585441,+ | |short_description=p@chr1:8585424..8585441,+ | ||
}} | }} |
Latest revision as of 10:49, 28 July 2015
Short description: | p@chr1:8585424..8585441, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:8585424..8585441, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data