FFCP PHASE1:Hg19::chr1:8986930..8986955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:8986930..8986955,- | |||
|coexpression_cluster_id=C98 | |coexpression_cluster_id=C98 | ||
|description=CAGE_peak_at_chr1:8986930..8986955,- | |description=CAGE_peak_at_chr1:8986930..8986955,- | ||
|id=chr1:8986930..8986955,- | |id=chr1:8986930..8986955,- | ||
|ontology_enrichment_celltype=CL:0000625!1.34e-40!11;CL:0000791!6.15e-33!18;CL:0000789!6.15e-33!18;CL:0002420!6.15e-33!18;CL:0002419!6.15e-33!18;CL:0000790!6.15e-33!18;CL:0000084!8.00e-23!25;CL:0000827!8.00e-23!25;CL:0000738!4.10e-13!140;CL:0002087!1.11e-12!119;CL:0000842!9.90e-12!3;CL:0000838!5.94e-11!52;CL:0000542!1.10e-10!53;CL:0000051!1.10e-10!53;CL:0002031!1.16e-09!124;CL:0000037!1.86e-09!172;CL:0000566!1.86e-09!172;CL:0000224!6.69e-09!4;CL:0000988!1.38e-08!182;CL:0002032!1.87e-07!165;CL:0000837!1.87e-07!165 | |ontology_enrichment_celltype=CL:0000625!1.34e-40!11;CL:0000791!6.15e-33!18;CL:0000789!6.15e-33!18;CL:0002420!6.15e-33!18;CL:0002419!6.15e-33!18;CL:0000790!6.15e-33!18;CL:0000084!8.00e-23!25;CL:0000827!8.00e-23!25;CL:0000738!4.10e-13!140;CL:0002087!1.11e-12!119;CL:0000842!9.90e-12!3;CL:0000838!5.94e-11!52;CL:0000542!1.10e-10!53;CL:0000051!1.10e-10!53;CL:0002031!1.16e-09!124;CL:0000037!1.86e-09!172;CL:0000566!1.86e-09!172;CL:0000224!6.69e-09!4;CL:0000988!1.38e-08!182;CL:0002032!1.87e-07!165;CL:0000837!1.87e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.15e-70;11!CL:0000791;2.90e-42;18!CL:0000789;2.90e-42;18!CL:0002419;2.90e-42;18!CL:0000084;5.39e-30;25!CL:0000226;5.71e-11;3!CL:0000842;5.71e-11;3!CL:0000542;5.17e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.02e-70,11;CL:0000791,2.84e-42,18;CL:0000789,2.84e-42,18;CL:0002420,2.84e-42,18;CL:0002419,2.84e-42,18;CL:0000790,2.84e-42,18;CL:0000084,5.32e-30,25;CL:0000827,5.32e-30,25;CL:0000838,1.39e-13,52;CL:0000542,2.70e-13,53;CL:0000051,2.70e-13,53;CL:0000226,5.71e-11,3;CL:0000842,5.71e-11,3;CL:0002087,1.33e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-42;18!CL:0000051;5.17e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.18e-18!15;UBERON:0000179!1.18e-18!15;UBERON:0000463!1.18e-18!15;UBERON:0002193!5.51e-12!112;UBERON:0002390!4.27e-11!102;UBERON:0003061!4.27e-11!102;UBERON:0004177!1.18e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!1.18e-18!15;UBERON:0000179!1.18e-18!15;UBERON:0000463!1.18e-18!15;UBERON:0002193!5.51e-12!112;UBERON:0002390!4.27e-11!102;UBERON:0003061!4.27e-11!102;UBERON:0004177!1.18e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-24;15!UBERON:0000179;3.66e-24;15!UBERON:0000463;3.66e-24;15!UBERON:0002390;1.68e-10;32!UBERON:0000029;7.55e-09;1!UBERON:0002193;1.80e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.29e-24,15;UBERON:0000179,4.29e-24,15;UBERON:0000463,4.29e-24,15;UBERON:0000029,6.22e-09,1 | |||
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|short_description=p@chr1:8986930..8986955,- | |short_description=p@chr1:8986930..8986955,- | ||
}} | }} |
Latest revision as of 11:08, 28 July 2015
Short description: | p@chr1:8986930..8986955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:8986930..8986955, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.02e-70 | 11 |
mature alpha-beta T cell | 2.84e-42 | 18 |
alpha-beta T cell | 2.84e-42 | 18 |
immature T cell | 2.84e-42 | 18 |
mature T cell | 2.84e-42 | 18 |
immature alpha-beta T cell | 2.84e-42 | 18 |
T cell | 5.32e-30 | 25 |
pro-T cell | 5.32e-30 | 25 |
lymphoid lineage restricted progenitor cell | 1.39e-13 | 52 |
lymphocyte | 2.70e-13 | 53 |
common lymphoid progenitor | 2.70e-13 | 53 |
single nucleate cell | 5.71e-11 | 3 |
mononuclear cell | 5.71e-11 | 3 |
nongranular leukocyte | 1.33e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 4.29e-24 | 15 |
haemolymphatic fluid | 4.29e-24 | 15 |
organism substance | 4.29e-24 | 15 |
lymph node | 6.22e-09 | 1 |