FFCP PHASE1:Hg19::chr1:98206661..98206672,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:98206661..98206672,- | |||
|description=CAGE_peak_at_chr1:98206661..98206672,- | |description=CAGE_peak_at_chr1:98206661..98206672,- | ||
|id=chr1:98206661..98206672,- | |id=chr1:98206661..98206672,- | ||
|ontology_enrichment_celltype=CL:0000064!7.88e-20!3;CL:0005012!7.88e-20!3;CL:0000067!7.88e-20!3;CL:0002304!7.88e-20!3;CL:0000511!8.63e-16!1;CL:0002625!8.63e-16!1;CL:0000216!8.63e-16!1;CL:0000075!1.26e-08!27;CL:0000710!6.17e-07!20 | |ontology_enrichment_celltype=CL:0000064!7.88e-20!3;CL:0005012!7.88e-20!3;CL:0000067!7.88e-20!3;CL:0002304!7.88e-20!3;CL:0000511!8.63e-16!1;CL:0002625!8.63e-16!1;CL:0000216!8.63e-16!1;CL:0000075!1.26e-08!27;CL:0000710!6.17e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000511;7.05e-34;1!CL:0002625;7.05e-34;1!CL:0000216;7.05e-34;1!CL:0000134;1.78e-08;55!CL:0000154;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-34,1;CL:0002625,5.05e-34,1;CL:0000216,5.05e-34,1;CL:0000154,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!2.96e-29!2;DOID:2394!9.23e-26!14;DOID:120!1.55e-25!27;DOID:193!9.50e-24!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.72e-38;14!DOID:120;6.67e-31;27!DOID:193;8.09e-29;29!DOID:4468;1.07e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.72e-38,14;DOID:120,7.10e-31,27;DOID:193,8.57e-29,29;DOID:4468,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0001778!7.88e-20!3;UBERON:0001775!7.88e-20!3;UBERON:0001136!8.63e-16!1;UBERON:0001343!8.63e-16!1;UBERON:0004910!8.63e-16!1;UBERON:0005154!8.63e-16!1;UBERON:0005295!8.63e-16!1;UBERON:0004813!8.63e-16!1;UBERON:0005297!8.63e-16!1;UBERON:0005294!8.63e-16!1;UBERON:0010141!8.63e-16!1;UBERON:0005891!8.63e-16!1;UBERON:0002119!1.92e-15!4;UBERON:0004531!1.92e-15!4;UBERON:0000488!3.94e-15!4;UBERON:0007625!3.79e-12!11;UBERON:0000991!2.44e-11!21;UBERON:0009196!2.44e-11!21;UBERON:0009117!2.44e-11!21;UBERON:0005564!2.44e-11!21;UBERON:0004176!7.78e-11!22;UBERON:0000992!1.15e-10!13;UBERON:0002203!2.09e-10!6;UBERON:0001768!2.09e-10!6;UBERON:0001801!1.14e-09!14;UBERON:0004909!1.50e-08!2;UBERON:0000019!2.89e-07!19;UBERON:0000047!2.89e-07!19;UBERON:0004088!2.89e-07!19;UBERON:0003072!2.89e-07!19;UBERON:0003071!2.89e-07!19;UBERON:0004128!2.89e-07!19;UBERON:0000970!6.30e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.05e-34;1!UBERON:0001343;7.05e-34;1!UBERON:0004910;7.05e-34;1!UBERON:0004813;7.05e-34;1!UBERON:0002119;7.69e-34;4!UBERON:0000991;1.19e-25;21!UBERON:0000992;1.29e-23;13!UBERON:0004909;1.07e-17;2!UBERON:0003134;3.59e-10;33!UBERON:0005904;1.57e-09;4!UBERON:0003133;3.87e-08;44!UBERON:0002118;5.54e-08;5!UBERON:0002553;6.42e-08;52!UBERON:0000474;3.42e-07;37!UBERON:0004458;4.46e-07;48!UBERON:0002323;4.88e-07;45!UBERON:0003100;5.58e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.05e-34,1;UBERON:0001343,5.05e-34,1;UBERON:0004910,5.05e-34,1;UBERON:0005154,5.05e-34,1;UBERON:0005295,5.05e-34,1;UBERON:0004813,5.05e-34,1;UBERON:0005297,5.05e-34,1;UBERON:0005294,5.05e-34,1;UBERON:0010141,5.05e-34,1;UBERON:0005891,5.05e-34,1;UBERON:0002119,8.36e-34,4;UBERON:0000991,1.12e-25,21;UBERON:0009196,1.12e-25,21;UBERON:0009117,1.12e-25,21;UBERON:0005564,1.12e-25,21;UBERON:0004176,1.51e-24,22;UBERON:0000992,1.29e-23,13;UBERON:0004909,9.07e-18,2;UBERON:0002323,4.39e-12,46;UBERON:0003133,1.32e-11,48;UBERON:0004458,2.22e-11,49;UBERON:0003886,2.23e-10,54;UBERON:0005904,1.44e-09,4;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59;UBERON:0002553,3.00e-09,61;UBERON:0003134,8.17e-09,37;UBERON:0000474,8.17e-09,37;UBERON:0003100,5.06e-08,41;UBERON:0002118,5.35e-08,5 | |||
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|short_description=p@chr1:98206661..98206672,- | |short_description=p@chr1:98206661..98206672,- | ||
}} | }} |
Latest revision as of 11:41, 28 July 2015
Short description: | p@chr1:98206661..98206672, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98206661..98206672, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.05e-34 | 1 |
seminiferous tubule epithelial cell | 5.05e-34 | 1 |
Sertoli cell | 5.05e-34 | 1 |
protein secreting cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.05e-34 | 1 |
seminiferous tubule of testis | 5.05e-34 | 1 |
epithelium of male gonad | 5.05e-34 | 1 |
epithelial cord | 5.05e-34 | 1 |
sex cord | 5.05e-34 | 1 |
seminiferous tubule epithelium | 5.05e-34 | 1 |
testis sex cord | 5.05e-34 | 1 |
genital ridge | 5.05e-34 | 1 |
primitive sex cord of indifferent gonad | 5.05e-34 | 1 |
coelomic epithelium | 5.05e-34 | 1 |
left ovary | 8.36e-34 | 4 |
gonad | 1.12e-25 | 21 |
indifferent external genitalia | 1.12e-25 | 21 |
indifferent gonad | 1.12e-25 | 21 |
gonad primordium | 1.12e-25 | 21 |
external genitalia | 1.51e-24 | 22 |
female gonad | 1.29e-23 | 13 |
epithelium of gonad | 9.07e-18 | 2 |
body cavity | 4.39e-12 | 46 |
reproductive organ | 1.32e-11 | 48 |
body cavity or lining | 2.22e-11 | 49 |
body cavity precursor | 2.23e-10 | 54 |
duct of male reproductive system | 1.44e-09 | 4 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
anatomical cavity | 3.00e-09 | 61 |
female reproductive organ | 8.17e-09 | 37 |
female reproductive system | 8.17e-09 | 37 |
female organism | 5.06e-08 | 41 |
right ovary | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.72e-38 | 14 |
female reproductive organ cancer | 7.10e-31 | 27 |
reproductive organ cancer | 8.57e-29 | 29 |
clear cell adenocarcinoma | 1.27e-17 | 2 |