FFCP PHASE1:Hg19::chr20:19920057..19920064,+: Difference between revisions
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|id=chr20:19920057..19920064,+
|short_description=p@chr20:19920057..19920064,+
|description=CAGE_peak_at_chr20:19920057..19920064,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:19920057..19920064,+ | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr20:19920057..19920064,+ | |||
|id=chr20:19920057..19920064,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.18e-28!42;CL:0000860!2.98e-26!45;CL:0002194!2.64e-22!63;CL:0000576!2.64e-22!63;CL:0000040!2.64e-22!63;CL:0000559!2.64e-22!63;CL:0002009!1.67e-21!65;CL:0000839!1.07e-19!70;CL:0000557!2.28e-19!71;CL:0000766!7.64e-18!76;CL:0000763!7.16e-11!112;CL:0000049!7.16e-11!112;CL:0002087!5.24e-10!119;CL:0002031!1.89e-09!124;CL:0000738!6.13e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-33;33!CL:0002057;4.63e-33;33!CL:0000473;2.22e-24;39!CL:0000234;2.22e-24;39!CL:0000576;3.21e-17;48!CL:0002593;1.14e-13;2!CL:0000766;1.20e-11;69!CL:0002087;3.30e-07;104!CL:0000763;4.80e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.62e-29,42;CL:0002057,7.62e-29,42;CL:0000473,2.89e-25,48;CL:0000234,2.89e-25,48;CL:0002194,3.03e-20,59;CL:0000576,3.03e-20,59;CL:0000040,3.03e-20,59;CL:0000559,3.03e-20,59;CL:0002009,1.35e-19,61;CL:0000839,3.83e-18,66;CL:0000557,7.05e-18,67;CL:0000766,1.16e-16,72;CL:0002593,1.21e-13,2;CL:0000763,3.60e-11,108;CL:0000049,3.60e-11,108;CL:0002087,1.71e-10,115;CL:0002031,4.65e-10,120;CL:0000738,7.06e-09,136;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0000037,3.55e-07,168;CL:0000988,8.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-20;42!CL:0000049;7.21e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.98e-17!86;UBERON:0002371!9.26e-17!80;UBERON:0004765!4.41e-14!101;UBERON:0001434!4.41e-14!101;UBERON:0002390!2.58e-12!102;UBERON:0003061!2.58e-12!102;UBERON:0002193!2.73e-12!112;UBERON:0002405!7.31e-12!115;UBERON:0006947!6.14e-08!3;UBERON:0004054!6.14e-08!3;UBERON:0002204!6.78e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.14e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.45e-16,76;UBERON:0001474,1.16e-14,82;UBERON:0002456,1.21e-13,2;UBERON:0004765,2.23e-13,90;UBERON:0002405,5.96e-13,93;UBERON:0002390,2.68e-12,98;UBERON:0003061,2.68e-12,98;UBERON:0001434,4.69e-12,100;UBERON:0002193,3.60e-11,108;UBERON:0002204,2.03e-09,167;UBERON:0003081,9.83e-08,203 | |||
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|short_description=p@chr20:19920057..19920064,+ | |||
}} | }} |
Latest revision as of 12:18, 28 July 2015
Short description: | p@chr20:19920057..19920064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19920057..19920064, + |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.62e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.62e-29 | 42 |
defensive cell | 2.89e-25 | 48 |
phagocyte | 2.89e-25 | 48 |
monopoietic cell | 3.03e-20 | 59 |
monocyte | 3.03e-20 | 59 |
monoblast | 3.03e-20 | 59 |
promonocyte | 3.03e-20 | 59 |
macrophage dendritic cell progenitor | 1.35e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.83e-18 | 66 |
granulocyte monocyte progenitor cell | 7.05e-18 | 67 |
myeloid leukocyte | 1.16e-16 | 72 |
smooth muscle cell of the internal thoracic artery | 1.21e-13 | 2 |
myeloid cell | 3.60e-11 | 108 |
common myeloid progenitor | 3.60e-11 | 108 |
nongranular leukocyte | 1.71e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.65e-10 | 120 |
leukocyte | 7.06e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic stem cell | 3.55e-07 | 168 |
hematopoietic cell | 8.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.45e-16 | 76 |
bone element | 1.16e-14 | 82 |
internal thoracic artery | 1.21e-13 | 2 |
skeletal element | 2.23e-13 | 90 |
immune system | 5.96e-13 | 93 |
hematopoietic system | 2.68e-12 | 98 |
blood island | 2.68e-12 | 98 |
skeletal system | 4.69e-12 | 100 |
hemolymphoid system | 3.60e-11 | 108 |
musculoskeletal system | 2.03e-09 | 167 |
lateral plate mesoderm | 9.83e-08 | 203 |