FFCP PHASE1:Hg19::chr20:20248468..20248484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000460400_5end | |association_with_transcript=-15bp_to_ENST00000460400_5end | ||
|cluster_id=chr20:20248468..20248484,- | |||
|description=CAGE_peak_2_at_ENST00000460400_5end | |description=CAGE_peak_2_at_ENST00000460400_5end | ||
|id=chr20:20248468..20248484,- | |id=chr20:20248468..20248484,- | ||
|ontology_enrichment_celltype=CL:0000235;5.08e-33;6!CL:0000123;1.21e-17;2!CL:0000242;1.21e-17;2!CL:0000167;1.37e-09;1!CL:0000164;1.37e-09;1!CL:0000502;1.37e-09;1!CL:0000172;1.37e-09;1!CL:0000173;1.37e-09;1!CL:0000312;1.39e-07;5 | |ontology_enrichment_celltype=CL:0000235!4.94e-07!10;CL:0000242!5.18e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;5.08e-33;6!CL:0000123;1.21e-17;2!CL:0000242;1.21e-17;2!CL:0000167;1.37e-09;1!CL:0000164;1.37e-09;1!CL:0000502;1.37e-09;1!CL:0000172;1.37e-09;1!CL:0000173;1.37e-09;1!CL:0000312;1.39e-07;5 | ||
|ontology_enrichment_disease=DOID:0060085;1.03e-09;1!DOID:3165;1.03e-09;1!DOID:0060121;1.03e-09;1!DOID:2438;1.03e-09;1!DOID:4418;1.03e-09;1!DOID:4430;1.37e-09;1!DOID:3112;1.91e-09;1!DOID:5409;5.73e-09;4 | |ontology_enrichment_celltype_v019_2=CL:0000235,2.52e-33,6;CL:0000242,1.26e-17,2;CL:0000167,1.21e-09,1;CL:0000164,1.21e-09,1;CL:0000502,1.21e-09,1;CL:0000172,1.21e-09,1;CL:0000173,1.21e-09,1;CL:0002351,1.21e-09,1;CL:0000312,1.41e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0001282;3.67e-09;1!UBERON:0002171;3.67e-09;1!UBERON:0009842;3.67e-09;1!UBERON:0003704;3.67e-09;1!UBERON:0006518;3.67e-09;1!UBERON:0008949;3.67e-09;1!UBERON:0000101;3.67e-09;1!UBERON:0001171;3.67e-09;1!UBERON:0001172;3.67e-09;1!UBERON:0002167;3.67e-09;1!UBERON:0003296;9.24e-09;4!UBERON:0010133;9.24e-09;4!UBERON:0002046;2.76e-07;5 | |ontology_enrichment_development_v019=CL:0002351;1.37e-09;1!UBERON:0007123;2.76e-07;5 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.03e-09;1!DOID:3165;1.03e-09;1!DOID:0060121;1.03e-09;1!DOID:2438;1.03e-09;1!DOID:4418;1.03e-09;1!DOID:4430;1.37e-09;1!DOID:3112;1.91e-09;1!DOID:5409;5.73e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.03e-09,1;DOID:3165,1.03e-09,1;DOID:0060121,1.03e-09,1;DOID:2438,1.03e-09,1;DOID:4418,1.03e-09,1;DOID:4430,1.21e-09,1;DOID:3112,1.99e-09,1;DOID:5409,4.89e-09,4;DOID:0050687,1.75e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002619!6.13e-09!22;UBERON:0002780!1.55e-08!41;UBERON:0001890!1.55e-08!41;UBERON:0006240!1.55e-08!41;UBERON:0003080!2.89e-08!42;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0001049!3.12e-07!57;UBERON:0005068!3.12e-07!57;UBERON:0006241!3.12e-07!57;UBERON:0007135!3.12e-07!57;UBERON:0000955!6.45e-07!69;UBERON:0006238!6.45e-07!69;UBERON:0002616!7.10e-07!59;UBERON:0000073!7.80e-07!94;UBERON:0001016!7.80e-07!94;UBERON:0003296!7.99e-07!4;UBERON:0010133!7.99e-07!4;UBERON:0001017!8.20e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.67e-09;1!UBERON:0002171;3.67e-09;1!UBERON:0009842;3.67e-09;1!UBERON:0003704;3.67e-09;1!UBERON:0006518;3.67e-09;1!UBERON:0008949;3.67e-09;1!UBERON:0000101;3.67e-09;1!UBERON:0001171;3.67e-09;1!UBERON:0001172;3.67e-09;1!UBERON:0002167;3.67e-09;1!UBERON:0003296;9.24e-09;4!UBERON:0010133;9.24e-09;4!UBERON:0002046;2.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.25e-09,1;UBERON:0006518,3.25e-09,1;UBERON:0008949,3.25e-09,1;UBERON:0000101,3.25e-09,1;UBERON:0002167,3.25e-09,1;UBERON:0001282,4.87e-09,1;UBERON:0009842,4.87e-09,1;UBERON:0003704,4.87e-09,1;UBERON:0001171,4.87e-09,1;UBERON:0001172,4.87e-09,1;UBERON:0003296,1.00e-08,4;UBERON:0010133,1.00e-08,4;UBERON:0002046,2.94e-07,5;UBERON:0004117,2.94e-07,5;UBERON:0007689,2.94e-07,5;UBERON:0007123,2.94e-07,5;UBERON:0003091,2.94e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,2.57404691653161,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.561421621224659,0.586032717087576,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95727842751532,0,0,0,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0,0,1.13942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,4.76915068087175,0,0,1.52301758477914,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13312091520126,0,0,0.129282956361551,0,0,0,0,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0,0,0,0,0.856396000634902,0,8.89836321033075,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,0,0,0.196295437002051,0,0,0,0,0,0,0,4.23580644277392,0,0,2.29280684514135,0,0,0,0.206686796501184,0,0,0,0,0,0,0,1.3451348888753,0.606965604236632,1.59363533945908,0,0,0,0,0.131545547125698,0,0,0,0,0,0.913158720509496,0.431855182437243,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,1.9027214524411,0,0,3.47214540203349,0,0,12.2282497053996,0,3.53514820652439,0,0,0,0,0,0,0,0,3.17605384544123,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,1.34558235096736,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,2.57404691653161,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.561421621224659,0.586032717087576,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95727842751532,0,0,0,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0,0,1.13942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,4.76915068087175,0,0,1.52301758477914,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13312091520126,0,0,0.129282956361551,0,0,0,0,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0,0,0,0,0.856396000634902,0,8.89836321033075,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0.638535436228605,0.41023272848151,0,0.0691572524642179,0,0,0.196295437002051,0,0,0,0,0,0,0,4.23580644277392,0,0,2.29280684514135,0,0,0,0.206686796501184,0,0,0,0,0,0,0,1.3451348888753,0.606965604236632,1.59363533945908,0,0,0,0,0.131545547125698,0,0,0,0,0,0.913158720509496,0.431855182437243,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,1.9027214524411,0,0,3.47214540203349,0,0,12.2282497053996,0,3.53514820652439,0,0,0,0,0,0,0,0,3.17605384544123,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,1.34558235096736,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@ENST00000460400 | |short_description=p2@ENST00000460400 | ||
}} | }} |
Latest revision as of 12:20, 28 July 2015
Short description: | p2@ENST00000460400 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000460400_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000460400_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.52e-33 | 6 |
Merkel cell | 1.26e-17 | 2 |
peptide hormone secreting cell | 1.21e-09 | 1 |
enteroendocrine cell | 1.21e-09 | 1 |
type D enteroendocrine cell | 1.21e-09 | 1 |
somatostatin secreting cell | 1.21e-09 | 1 |
pancreatic D cell | 1.21e-09 | 1 |
progenitor cell of endocrine pancreas | 1.21e-09 | 1 |
keratinocyte | 1.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.25e-09 | 1 |
right lung lobe | 3.25e-09 | 1 |
lower lobe of lung | 3.25e-09 | 1 |
lobe of lung | 3.25e-09 | 1 |
right lung | 3.25e-09 | 1 |
intralobular bile duct | 4.87e-09 | 1 |
acinus | 4.87e-09 | 1 |
intrahepatic bile duct | 4.87e-09 | 1 |
portal lobule | 4.87e-09 | 1 |
hepatic acinus | 4.87e-09 | 1 |
gland of diencephalon | 1.00e-08 | 4 |
neuroendocrine gland | 1.00e-08 | 4 |
thyroid gland | 2.94e-07 | 5 |
pharyngeal pouch | 2.94e-07 | 5 |
thyroid diverticulum | 2.94e-07 | 5 |
pharyngeal pouch 2 | 2.94e-07 | 5 |
thyroid primordium | 2.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.03e-09 | 1 |
skin benign neoplasm | 1.03e-09 | 1 |
integumentary system benign neoplasm | 1.03e-09 | 1 |
dermis tumor | 1.03e-09 | 1 |
cutaneous fibrous histiocytoma | 1.03e-09 | 1 |
somatostatinoma | 1.21e-09 | 1 |
papillary adenocarcinoma | 1.99e-09 | 1 |
lung small cell carcinoma | 4.89e-09 | 4 |
cell type cancer | 1.75e-08 | 143 |