FFCP PHASE1:Hg19::chr20:23728392..23728424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23728392..23728424,+ | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_at_chr20:23728392..23728424,+ | |description=CAGE_peak_at_chr20:23728392..23728424,+ | ||
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|ontology_enrichment_celltype=CL:0002322!2.58e-16!5;CL:0000148!4.20e-08!10;CL:0000541!4.20e-08!10;CL:0002582!2.34e-07!3;CL:0002622!3.53e-07!3 | |ontology_enrichment_celltype=CL:0002322!2.58e-16!5;CL:0000148!4.20e-08!10;CL:0000541!4.20e-08!10;CL:0002582!2.34e-07!3;CL:0002622!3.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.02e-23;5!CL:0000148;2.98e-12;10!CL:0000322;1.04e-10;3!CL:0002582;1.04e-10;3!CL:0000147;4.95e-09;14!CL:0002321;1.71e-08;15!CL:0002595;5.38e-07;5 | |ontology_enrichment_celltype_v019=CL:0002322;2.02e-23;5!CL:0000148;2.98e-12;10!CL:0000322;1.04e-10;3!CL:0002582;1.04e-10;3!CL:0000147;4.95e-09;14!CL:0002321;1.71e-08;15!CL:0002595;5.38e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.61e-23,5;CL:0000148,2.66e-12,10;CL:0000541,2.66e-12,10;CL:0000322,1.09e-10,3;CL:0002582,1.20e-10,3;CL:0000147,4.56e-09,14;CL:0002595,5.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1 | |ontology_enrichment_development_v019=UBERON:0006298;9.99e-30;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;2.21e-15;2!DOID:3908;6.21e-07;5 | |ontology_enrichment_disease_v019=DOID:3910;2.21e-15;2!DOID:3908;6.21e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.37e-15,2;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003408!4.64e-12!10;UBERON:0001829!2.46e-11!2;UBERON:0001044!2.42e-08!6;UBERON:0003293!2.42e-08!6;UBERON:0003294!2.42e-08!6;UBERON:0010047!2.42e-08!6;UBERON:0000167!2.42e-08!6;UBERON:0000161!1.10e-07!35;UBERON:0003929!6.41e-07!54 | |ontology_enrichment_uberon=UBERON:0003408!4.64e-12!10;UBERON:0001829!2.46e-11!2;UBERON:0001044!2.42e-08!6;UBERON:0003293!2.42e-08!6;UBERON:0003294!2.42e-08!6;UBERON:0010047!2.42e-08!6;UBERON:0000167!2.42e-08!6;UBERON:0000161!1.10e-07!35;UBERON:0003929!6.41e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;9.99e-30;1!UBERON:0001044;4.86e-20;6!UBERON:0003293;4.86e-20;6!UBERON:0003294;4.86e-20;6!UBERON:0010047;4.86e-20;6!UBERON:0003408;4.86e-20;6!UBERON:0000167;4.86e-20;6!UBERON:0001829;1.33e-15;2!UBERON:0004903;2.21e-15;2!UBERON:0002173;2.21e-15;2!UBERON:0002186;2.21e-15;2!UBERON:0004821;1.04e-10;3!UBERON:0007499;1.04e-10;3!UBERON:0003215;1.04e-10;3!UBERON:0010368;1.04e-10;3!UBERON:0009911;1.04e-10;3!UBERON:0002299;1.04e-10;3!UBERON:0006524;1.04e-10;3!UBERON:0008874;1.04e-10;3!UBERON:0002169;1.04e-10;3!UBERON:0004894;1.04e-10;3!UBERON:0001041;3.57e-09;14!UBERON:0009856;2.35e-08;4!UBERON:0000161;5.33e-07;19!UBERON:0000166;5.33e-07;19!UBERON:0003834;5.38e-07;5!UBERON:0001533;5.38e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001736;9.99e-30;1!UBERON:0001044;4.86e-20;6!UBERON:0003293;4.86e-20;6!UBERON:0003294;4.86e-20;6!UBERON:0010047;4.86e-20;6!UBERON:0003408;4.86e-20;6!UBERON:0000167;4.86e-20;6!UBERON:0001829;1.33e-15;2!UBERON:0004903;2.21e-15;2!UBERON:0002173;2.21e-15;2!UBERON:0002186;2.21e-15;2!UBERON:0004821;1.04e-10;3!UBERON:0007499;1.04e-10;3!UBERON:0003215;1.04e-10;3!UBERON:0010368;1.04e-10;3!UBERON:0009911;1.04e-10;3!UBERON:0002299;1.04e-10;3!UBERON:0006524;1.04e-10;3!UBERON:0008874;1.04e-10;3!UBERON:0002169;1.04e-10;3!UBERON:0004894;1.04e-10;3!UBERON:0001041;3.57e-09;14!UBERON:0009856;2.35e-08;4!UBERON:0000161;5.33e-07;19!UBERON:0000166;5.33e-07;19!UBERON:0003834;5.38e-07;5!UBERON:0001533;5.38e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.99e-30,1;UBERON:0006298,9.99e-30,1;UBERON:0001044,4.86e-20,6;UBERON:0003293,4.86e-20,6;UBERON:0003294,4.86e-20,6;UBERON:0010047,4.86e-20,6;UBERON:0000167,4.86e-20,6;UBERON:0001829,1.33e-15,2;UBERON:0004903,2.37e-15,2;UBERON:0002173,2.37e-15,2;UBERON:0002186,2.37e-15,2;UBERON:0003408,1.89e-12,10;UBERON:0004821,1.09e-10,3;UBERON:0003215,1.09e-10,3;UBERON:0010368,1.09e-10,3;UBERON:0009911,1.09e-10,3;UBERON:0002299,1.09e-10,3;UBERON:0006524,1.09e-10,3;UBERON:0008874,1.09e-10,3;UBERON:0002169,1.09e-10,3;UBERON:0004894,1.09e-10,3;UBERON:0003834,5.38e-07,5;UBERON:0001533,5.38e-07,5 | |||
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|short_description=p@chr20:23728392..23728424,+ | |short_description=p@chr20:23728392..23728424,+ | ||
}} | }} |
Latest revision as of 12:35, 28 July 2015
Short description: | p@chr20:23728392..23728424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23728392..23728424, + |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.61e-23 | 5 |
melanocyte | 2.66e-12 | 10 |
melanoblast | 2.66e-12 | 10 |
pneumocyte | 1.09e-10 | 3 |
visceral preadipocyte | 1.20e-10 | 3 |
pigment cell | 4.56e-09 | 14 |
smooth muscle cell of the subclavian artery | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.99e-30 | 1 |
submandibular gland primordium | 9.99e-30 | 1 |
saliva-secreting gland | 4.86e-20 | 6 |
gland of oral region | 4.86e-20 | 6 |
gland of foregut | 4.86e-20 | 6 |
oral gland | 4.86e-20 | 6 |
oral cavity | 4.86e-20 | 6 |
major salivary gland | 1.33e-15 | 2 |
bronchoalveolar duct junction | 2.37e-15 | 2 |
alveolar duct | 2.37e-15 | 2 |
bronchiole | 2.37e-15 | 2 |
gland of gut | 1.89e-12 | 10 |
pulmonary alveolus epithelium | 1.09e-10 | 3 |
alveolus | 1.09e-10 | 3 |
pulmonary lobule | 1.09e-10 | 3 |
lobule | 1.09e-10 | 3 |
alveolus of lung | 1.09e-10 | 3 |
alveolar system | 1.09e-10 | 3 |
pulmonary acinus | 1.09e-10 | 3 |
alveolar sac | 1.09e-10 | 3 |
alveolar wall | 1.09e-10 | 3 |
thoracic segment blood vessel | 5.38e-07 | 5 |
subclavian artery | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.37e-15 | 2 |
non-small cell lung carcinoma | 6.39e-07 | 5 |