FFCP PHASE1:Hg19::chr20:39317102..39317113,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:39317102..39317113,+ | |||
|description=CAGE_peak_at_chr20:39317102..39317113,+ | |description=CAGE_peak_at_chr20:39317102..39317113,+ | ||
|id=chr20:39317102..39317113,+ | |id=chr20:39317102..39317113,+ | ||
|ontology_enrichment_celltype=CL:0002009!9.98e-19!65;CL:0002194!2.88e-18!63;CL:0000576!2.88e-18!63;CL:0000040!2.88e-18!63;CL:0000559!2.88e-18!63;CL:0002057!1.72e-17!42;CL:0000860!6.79e-17!45;CL:0000557!3.56e-16!71;CL:0000839!2.48e-15!70;CL:0000766!2.66e-15!76;CL:0000763!2.63e-08!112;CL:0000049!2.63e-08!112 | |ontology_enrichment_celltype=CL:0002009!9.98e-19!65;CL:0002194!2.88e-18!63;CL:0000576!2.88e-18!63;CL:0000040!2.88e-18!63;CL:0000559!2.88e-18!63;CL:0002057!1.72e-17!42;CL:0000860!6.79e-17!45;CL:0000557!3.56e-16!71;CL:0000839!2.48e-15!70;CL:0000766!2.66e-15!76;CL:0000763!2.63e-08!112;CL:0000049!2.63e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.96e-26;39!CL:0000234;1.96e-26;39!CL:0000860;3.59e-25;33!CL:0002057;3.59e-25;33!CL:0000576;8.48e-20;48!CL:0000766;2.56e-14;69!CL:0000346;2.37e-10;3!CL:1000428;2.37e-10;3!CL:0002577;2.37e-10;3!CL:0000763;4.06e-09;100 | |ontology_enrichment_celltype_v019=CL:0000473;1.96e-26;39!CL:0000234;1.96e-26;39!CL:0000860;3.59e-25;33!CL:0002057;3.59e-25;33!CL:0000576;8.48e-20;48!CL:0000766;2.56e-14;69!CL:0000346;2.37e-10;3!CL:1000428;2.37e-10;3!CL:0002577;2.37e-10;3!CL:0000763;4.06e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.16e-35,48;CL:0000234,2.16e-35,48;CL:0002194,2.13e-31,59;CL:0000576,2.13e-31,59;CL:0000040,2.13e-31,59;CL:0000559,2.13e-31,59;CL:0000860,7.46e-31,42;CL:0002057,7.46e-31,42;CL:0002009,2.78e-30,61;CL:0000839,8.83e-28,66;CL:0000557,2.52e-27,67;CL:0000766,3.13e-25,72;CL:0002087,1.22e-16,115;CL:0000763,8.09e-16,108;CL:0000049,8.09e-16,108;CL:0002031,6.34e-14,120;CL:0000738,1.48e-13,136;CL:0002577,1.70e-10,3;CL:0000037,2.47e-10,168;CL:0000346,3.16e-10,3;CL:1000428,3.16e-10,3;CL:0000988,1.23e-09,177;CL:0002032,1.43e-09,161;CL:0000837,1.43e-09,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-25;42 | |ontology_enrichment_development_v019=CL:0002057;2.36e-25;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-14!102;UBERON:0003061!1.53e-14!102;UBERON:0002193!7.79e-14!112;UBERON:0002371!4.15e-13!80;UBERON:0001474!6.24e-13!86;UBERON:0007023!2.36e-12!115;UBERON:0002405!1.30e-10!115;UBERON:0004765!4.91e-10!101;UBERON:0001434!4.91e-10!101;UBERON:0000468!6.81e-09!659;UBERON:0000922!2.19e-08!612;UBERON:0000062!2.00e-07!511;UBERON:0000923!2.64e-07!604;UBERON:0005291!2.64e-07!604;UBERON:0006598!2.64e-07!604;UBERON:0002532!2.64e-07!604;UBERON:0002050!3.07e-07!605;UBERON:0005423!3.07e-07!605;UBERON:0000467!7.68e-07!625;UBERON:0000480!8.88e-07!626 | |ontology_enrichment_uberon=UBERON:0002390!1.53e-14!102;UBERON:0003061!1.53e-14!102;UBERON:0002193!7.79e-14!112;UBERON:0002371!4.15e-13!80;UBERON:0001474!6.24e-13!86;UBERON:0007023!2.36e-12!115;UBERON:0002405!1.30e-10!115;UBERON:0004765!4.91e-10!101;UBERON:0001434!4.91e-10!101;UBERON:0000468!6.81e-09!659;UBERON:0000922!2.19e-08!612;UBERON:0000062!2.00e-07!511;UBERON:0000923!2.64e-07!604;UBERON:0005291!2.64e-07!604;UBERON:0006598!2.64e-07!604;UBERON:0002532!2.64e-07!604;UBERON:0002050!3.07e-07!605;UBERON:0005423!3.07e-07!605;UBERON:0000467!7.68e-07!625;UBERON:0000480!8.88e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.37e-10;3!UBERON:0001992;2.37e-10;3!UBERON:0000029;2.20e-08;1!UBERON:0001987;5.61e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0000412;2.37e-10;3!UBERON:0001992;2.37e-10;3!UBERON:0000029;2.20e-08;1!UBERON:0001987;5.61e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.58e-25,98;UBERON:0003061,2.58e-25,98;UBERON:0002193,3.08e-25,108;UBERON:0002405,5.09e-24,93;UBERON:0002371,9.45e-24,76;UBERON:0001474,8.47e-22,82;UBERON:0004765,1.35e-19,90;UBERON:0001434,2.49e-17,100;UBERON:0003081,5.07e-13,203;UBERON:0000412,3.16e-10,3;UBERON:0001992,3.16e-10,3;UBERON:0000926,7.39e-10,315;UBERON:0004120,7.39e-10,315;UBERON:0006603,7.39e-10,315;UBERON:0002204,4.10e-09,167;UBERON:0000029,1.18e-08,1;UBERON:0001987,4.38e-08,4;UBERON:0004340,4.38e-08,4 | |||
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| ||
|short_description=p@chr20:39317102..39317113,+ | |short_description=p@chr20:39317102..39317113,+ | ||
}} | }} |
Latest revision as of 14:00, 28 July 2015
Short description: | p@chr20:39317102..39317113, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:39317102..39317113, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.16e-35 | 48 |
phagocyte | 2.16e-35 | 48 |
monopoietic cell | 2.13e-31 | 59 |
monocyte | 2.13e-31 | 59 |
monoblast | 2.13e-31 | 59 |
promonocyte | 2.13e-31 | 59 |
classical monocyte | 7.46e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.46e-31 | 42 |
macrophage dendritic cell progenitor | 2.78e-30 | 61 |
myeloid lineage restricted progenitor cell | 8.83e-28 | 66 |
granulocyte monocyte progenitor cell | 2.52e-27 | 67 |
myeloid leukocyte | 3.13e-25 | 72 |
nongranular leukocyte | 1.22e-16 | 115 |
myeloid cell | 8.09e-16 | 108 |
common myeloid progenitor | 8.09e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 6.34e-14 | 120 |
leukocyte | 1.48e-13 | 136 |
placental epithelial cell | 1.70e-10 | 3 |
hematopoietic stem cell | 2.47e-10 | 168 |
hair follicle dermal papilla cell | 3.16e-10 | 3 |
stem cell of epidermis | 3.16e-10 | 3 |
hematopoietic cell | 1.23e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.43e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.58e-25 | 98 |
blood island | 2.58e-25 | 98 |
hemolymphoid system | 3.08e-25 | 108 |
immune system | 5.09e-24 | 93 |
bone marrow | 9.45e-24 | 76 |
bone element | 8.47e-22 | 82 |
skeletal element | 1.35e-19 | 90 |
skeletal system | 2.49e-17 | 100 |
lateral plate mesoderm | 5.07e-13 | 203 |
dermal papilla | 3.16e-10 | 3 |
papillary layer of dermis | 3.16e-10 | 3 |
mesoderm | 7.39e-10 | 315 |
mesoderm-derived structure | 7.39e-10 | 315 |
presumptive mesoderm | 7.39e-10 | 315 |
musculoskeletal system | 4.10e-09 | 167 |
lymph node | 1.18e-08 | 1 |
placenta | 4.38e-08 | 4 |
allantois | 4.38e-08 | 4 |