FFCP PHASE1:Hg19::chr20:48315901..48315905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48315901..48315905,- | |||
|coexpression_cluster_id=C407 | |coexpression_cluster_id=C407 | ||
|description=CAGE_peak_at_chr20:48315901..48315905,- | |description=CAGE_peak_at_chr20:48315901..48315905,- | ||
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|ontology_enrichment_celltype=CL:0002057!2.13e-25!42;CL:0000860!4.13e-25!45;CL:0000766!4.31e-23!76;CL:0000839!5.55e-22!70;CL:0000738!9.97e-22!140;CL:0002032!1.26e-21!165;CL:0000837!1.26e-21!165;CL:0000037!2.45e-21!172;CL:0000566!2.45e-21!172;CL:0000763!1.06e-20!112;CL:0000049!1.06e-20!112;CL:0000557!2.03e-20!71;CL:0000988!2.42e-20!182;CL:0002031!2.88e-20!124;CL:0002194!2.77e-19!63;CL:0000576!2.77e-19!63;CL:0000040!2.77e-19!63;CL:0000559!2.77e-19!63;CL:0002009!3.61e-19!65;CL:0002087!9.22e-19!119 | |ontology_enrichment_celltype=CL:0002057!2.13e-25!42;CL:0000860!4.13e-25!45;CL:0000766!4.31e-23!76;CL:0000839!5.55e-22!70;CL:0000738!9.97e-22!140;CL:0002032!1.26e-21!165;CL:0000837!1.26e-21!165;CL:0000037!2.45e-21!172;CL:0000566!2.45e-21!172;CL:0000763!1.06e-20!112;CL:0000049!1.06e-20!112;CL:0000557!2.03e-20!71;CL:0000988!2.42e-20!182;CL:0002031!2.88e-20!124;CL:0002194!2.77e-19!63;CL:0000576!2.77e-19!63;CL:0000040!2.77e-19!63;CL:0000559!2.77e-19!63;CL:0002009!3.61e-19!65;CL:0002087!9.22e-19!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.32e-55;33!CL:0002057;6.32e-55;33!CL:0000473;3.75e-36;39!CL:0000234;3.75e-36;39!CL:0000576;5.83e-34;48!CL:0000766;6.88e-25;69!CL:0000775;4.38e-14;3!CL:0002087;9.25e-13;104!CL:0000763;1.62e-10;100!CL:0000738;9.72e-10;136!CL:0002393;1.65e-07;6!CL:0002397;1.65e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;6.32e-55;33!CL:0002057;6.32e-55;33!CL:0000473;3.75e-36;39!CL:0000234;3.75e-36;39!CL:0000576;5.83e-34;48!CL:0000766;6.88e-25;69!CL:0000775;4.38e-14;3!CL:0002087;9.25e-13;104!CL:0000763;1.62e-10;100!CL:0000738;9.72e-10;136!CL:0002393;1.65e-07;6!CL:0002397;1.65e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.32e-66,42;CL:0002057,8.32e-66,42;CL:0000473,8.77e-57,48;CL:0000234,8.77e-57,48;CL:0000766,6.55e-48,72;CL:0002194,3.76e-44,59;CL:0000576,3.76e-44,59;CL:0000040,3.76e-44,59;CL:0000559,3.76e-44,59;CL:0002009,1.60e-42,61;CL:0000839,5.39e-42,66;CL:0000557,2.79e-41,67;CL:0000738,1.03e-33,136;CL:0002087,1.48e-31,115;CL:0002031,7.22e-30,120;CL:0000763,9.90e-30,108;CL:0000049,9.90e-30,108;CL:0000037,8.34e-26,168;CL:0000988,9.22e-26,177;CL:0002032,1.69e-25,161;CL:0000837,1.69e-25,161;CL:0000775,4.70e-14,3;CL:0000134,1.37e-09,354;CL:0002320,3.04e-09,361;CL:0002393,3.39e-08,9;CL:0002397,3.39e-08,9;CL:0000219,4.97e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.83e-48;42!CL:0000049;7.11e-09;108 | |ontology_enrichment_development_v019=CL:0002057;6.83e-48;42!CL:0000049;7.11e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.61e-17!80;UBERON:0001474!5.35e-16!86;UBERON:0002405!1.67e-14!115;UBERON:0002390!3.29e-14!102;UBERON:0003061!3.29e-14!102;UBERON:0002193!2.90e-13!112;UBERON:0004765!3.27e-12!101;UBERON:0001434!3.27e-12!101 | |ontology_enrichment_uberon=UBERON:0002371!2.61e-17!80;UBERON:0001474!5.35e-16!86;UBERON:0002405!1.67e-14!115;UBERON:0002390!3.29e-14!102;UBERON:0003061!3.29e-14!102;UBERON:0002193!2.90e-13!112;UBERON:0004765!3.27e-12!101;UBERON:0001434!3.27e-12!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-35,76;UBERON:0001474,1.23e-32,82;UBERON:0002390,7.53e-31,98;UBERON:0003061,7.53e-31,98;UBERON:0004765,3.43e-29,90;UBERON:0002405,4.74e-28,93;UBERON:0002193,2.20e-27,108;UBERON:0001434,1.18e-25,100;UBERON:0002204,7.24e-13,167;UBERON:0003081,1.54e-12,203;UBERON:0002384,8.97e-09,371 | |||
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| ||
|short_description=p@chr20:48315901..48315905,- | |short_description=p@chr20:48315901..48315905,- | ||
}} | }} |
Latest revision as of 15:03, 28 July 2015
Short description: | p@chr20:48315901..48315905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48315901..48315905, - |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.32e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-66 | 42 |
defensive cell | 8.77e-57 | 48 |
phagocyte | 8.77e-57 | 48 |
myeloid leukocyte | 6.55e-48 | 72 |
monopoietic cell | 3.76e-44 | 59 |
monocyte | 3.76e-44 | 59 |
monoblast | 3.76e-44 | 59 |
promonocyte | 3.76e-44 | 59 |
macrophage dendritic cell progenitor | 1.60e-42 | 61 |
myeloid lineage restricted progenitor cell | 5.39e-42 | 66 |
granulocyte monocyte progenitor cell | 2.79e-41 | 67 |
leukocyte | 1.03e-33 | 136 |
nongranular leukocyte | 1.48e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 7.22e-30 | 120 |
myeloid cell | 9.90e-30 | 108 |
common myeloid progenitor | 9.90e-30 | 108 |
hematopoietic stem cell | 8.34e-26 | 168 |
hematopoietic cell | 9.22e-26 | 177 |
hematopoietic oligopotent progenitor cell | 1.69e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-25 | 161 |
neutrophil | 4.70e-14 | 3 |
mesenchymal cell | 1.37e-09 | 354 |
connective tissue cell | 3.04e-09 | 361 |
intermediate monocyte | 3.39e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.39e-08 | 9 |
motile cell | 4.97e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-35 | 76 |
bone element | 1.23e-32 | 82 |
hematopoietic system | 7.53e-31 | 98 |
blood island | 7.53e-31 | 98 |
skeletal element | 3.43e-29 | 90 |
immune system | 4.74e-28 | 93 |
hemolymphoid system | 2.20e-27 | 108 |
skeletal system | 1.18e-25 | 100 |
musculoskeletal system | 7.24e-13 | 167 |
lateral plate mesoderm | 1.54e-12 | 203 |
connective tissue | 8.97e-09 | 371 |