FFCP PHASE1:Hg19::chr20:48391901..48391918,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:48391901..48391918,-
|short_description=p@chr20:48391901..48391918,-
|description=CAGE_peak_at_chr20:48391901..48391918,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:48391901..48391918,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr20:48391901..48391918,- | |||
|id=chr20:48391901..48391918,- | |||
|ontology_enrichment_celltype=CL:0002057!5.71e-22!42;CL:0000860!9.45e-22!45;CL:0000766!5.16e-20!76;CL:0002194!4.34e-16!63;CL:0000576!4.34e-16!63;CL:0000040!4.34e-16!63;CL:0000559!4.34e-16!63;CL:0000839!7.18e-16!70;CL:0000557!1.99e-15!71;CL:0002009!3.84e-15!65;CL:0000763!1.17e-09!112;CL:0000049!1.17e-09!112;CL:0000738!1.08e-08!140;CL:0002087!5.56e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-57;33!CL:0002057;4.69e-57;33!CL:0000473;3.24e-40;39!CL:0000234;3.24e-40;39!CL:0000576;3.18e-31;48!CL:0000766;1.64e-24;69!CL:0000094;4.79e-13;8!CL:0000763;2.74e-10;100!CL:0002087;1.06e-09;104!CL:0000767;1.70e-09;3!CL:0000081;2.56e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.28e-61,42;CL:0002057,4.28e-61,42;CL:0000473,1.95e-52,48;CL:0000234,1.95e-52,48;CL:0000766,2.73e-47,72;CL:0002194,2.53e-40,59;CL:0000576,2.53e-40,59;CL:0000040,2.53e-40,59;CL:0000559,2.53e-40,59;CL:0002009,9.22e-39,61;CL:0000839,2.88e-35,66;CL:0000557,1.25e-34,67;CL:0000763,1.42e-28,108;CL:0000049,1.42e-28,108;CL:0000738,7.51e-24,136;CL:0002087,5.94e-20,115;CL:0000037,1.56e-17,168;CL:0002032,1.99e-17,161;CL:0000837,1.99e-17,161;CL:0002031,2.34e-17,120;CL:0000988,3.57e-16,177;CL:0000094,3.79e-13,8;CL:0000767,1.84e-09,3;CL:0000081,2.17e-09,11;CL:0000134,2.84e-07,354;CL:0002320,6.07e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-45;42!CL:0000049;9.65e-08;108 | |||
|ontology_enrichment_disease=DOID:305!2.37e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;6.14e-07;2!DOID:4929;9.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.49e-07,2;DOID:4929,9.16e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.64e-14!112;UBERON:0002390!6.45e-13!102;UBERON:0003061!6.45e-13!102;UBERON:0002371!1.02e-12!80;UBERON:0002405!2.15e-12!115;UBERON:0001474!8.23e-11!86;UBERON:0003081!2.44e-10!216;UBERON:0000926!7.90e-09!448;UBERON:0004120!7.90e-09!448;UBERON:0006603!7.90e-09!448;UBERON:0004765!4.04e-08!101;UBERON:0001434!4.04e-08!101;UBERON:0002204!4.46e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-29,76;UBERON:0001474,6.29e-27,82;UBERON:0004765,7.25e-24,90;UBERON:0002390,4.77e-23,98;UBERON:0003061,4.77e-23,98;UBERON:0002405,7.46e-23,93;UBERON:0001434,9.95e-21,100;UBERON:0002193,3.40e-20,108;UBERON:0002204,2.99e-12,167;UBERON:0003081,3.75e-11,203 | |||
|phase1_expression=0,1.2846031433459,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,4.70627602516243,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0,1.18009283054671,1.15148819429164,2.47705797305722,0,0,0,0,0,0.293600439334847,67.0334444323572,43.1170562060805,37.3258697631265,0,0,0,0.290796477559129,0,0.242584061187816,5.81072592264212,8.22335776043652,24.4668033007132,125.72157544478,82.7399082088995,110.673683587858,904.957411933624,416.337620911568,441.490346297554,2.44715041405386,0.545812300115692,1.79778787556068,629.614566606947,332.803401077909,537.682522796994,4.61791820261403,2.79249120670285,2.13112375266347,65.8774971686886,38.0148100543064,33.0095791967655,72.1083669286853,69.878711068307,79.0567394726625,90.8099253950053,76.2334706494259,64.2418646504995,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,2.34894875748376,0.382273228125229,0,7.8471198817415,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0.838998872419812,0,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.723033089650446,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.737930631258681,0.514703430895577,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02878754119172,2.61460037580088,3.19913571782583,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0,2.99602809578873,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,4.37582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.924100740528266,0.532306030317022,0,0.18532421910392,1.14499909393593,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0.563391205064483,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,3.55955110409873,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.455768223388005,0,0,0,0.638002319463839,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,2.95397290339238,1.63232808159148,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.867798691675654,0.979923974143776,0.261177619741208,0,0,0,0.219267951258557,0.0821154570532092,1.16386819786103,0,0,0.137041924646751,0.596143835108969,0,0.195551382734803,1.20238230377301,0,0.19980960958213,0,0,0.171594997861965,0.720273989940749,0.372757606696298,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0,1.11712960508902,0,0,0.399358000997982,0,0,0.201550417460179,0,0,0.315132729228895,0.164831716762333,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.439656701034247,0,0,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0.638341257770182,2.1760712134779,1.0027595760908,2.75711019087115,0.655745261419609,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,1.11507737014592,0,0.155262956876259,0,0,0,0,2.28483127301277,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,4.81549576018258,0,0,0,0,0.244736704506468,0,0.308801447160972,0.877136198314828,0.706756583783524,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,2.94927490504463,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0.462102664601353,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,1.18284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| ||
|short_description=p@chr20:48391901..48391918,- | |||
}} | }} |
Latest revision as of 15:05, 28 July 2015
Short description: | p@chr20:48391901..48391918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48391901..48391918, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.28e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.28e-61 | 42 |
defensive cell | 1.95e-52 | 48 |
phagocyte | 1.95e-52 | 48 |
myeloid leukocyte | 2.73e-47 | 72 |
monopoietic cell | 2.53e-40 | 59 |
monocyte | 2.53e-40 | 59 |
monoblast | 2.53e-40 | 59 |
promonocyte | 2.53e-40 | 59 |
macrophage dendritic cell progenitor | 9.22e-39 | 61 |
myeloid lineage restricted progenitor cell | 2.88e-35 | 66 |
granulocyte monocyte progenitor cell | 1.25e-34 | 67 |
myeloid cell | 1.42e-28 | 108 |
common myeloid progenitor | 1.42e-28 | 108 |
leukocyte | 7.51e-24 | 136 |
nongranular leukocyte | 5.94e-20 | 115 |
hematopoietic stem cell | 1.56e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.99e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 2.34e-17 | 120 |
hematopoietic cell | 3.57e-16 | 177 |
granulocyte | 3.79e-13 | 8 |
basophil | 1.84e-09 | 3 |
blood cell | 2.17e-09 | 11 |
mesenchymal cell | 2.84e-07 | 354 |
connective tissue cell | 6.07e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-29 | 76 |
bone element | 6.29e-27 | 82 |
skeletal element | 7.25e-24 | 90 |
hematopoietic system | 4.77e-23 | 98 |
blood island | 4.77e-23 | 98 |
immune system | 7.46e-23 | 93 |
skeletal system | 9.95e-21 | 100 |
hemolymphoid system | 3.40e-20 | 108 |
musculoskeletal system | 2.99e-12 | 167 |
lateral plate mesoderm | 3.75e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.49e-07 | 2 |
tubular adenocarcinoma | 9.16e-07 | 2 |