FFCP PHASE1:Hg19::chr20:48789098..48789119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000411453_5end | |association_with_transcript=-7bp_to_ENST00000411453_5end | ||
|cluster_id=chr20:48789098..48789119,+ | |||
|description=CAGE_peak_1_at_ENST00000411453_5end | |description=CAGE_peak_1_at_ENST00000411453_5end | ||
|id=chr20:48789098..48789119,+ | |id=chr20:48789098..48789119,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.08e-11!254 | |ontology_enrichment_celltype=CL:0000066!7.08e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.01e-08;12!CL:0000159;8.23e-07;2 | |ontology_enrichment_celltype_v019=CL:0000182;3.01e-08;12!CL:0000159;8.23e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.54e-12,253;CL:0000223,5.61e-10,58;CL:0000182,2.57e-08,12;CL:0002563,3.60e-07,4;CL:0000159,5.74e-07,2;CL:0002253,6.26e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.86e-12;31!UBERON:0001041;2.82e-11;30!UBERON:0004161;4.52e-09;11!UBERON:0009497;1.50e-07;13 | |ontology_enrichment_development_v019=UBERON:0003104;6.86e-12;31!UBERON:0001041;2.82e-11;30!UBERON:0004161;4.52e-09;11!UBERON:0009497;1.50e-07;13 | ||
|ontology_enrichment_disease=DOID:305!2.67e-19!106;DOID:0050687!1.07e-11!143 | |ontology_enrichment_disease=DOID:305!2.67e-19!106;DOID:0050687!1.07e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:299;2.89e-11;25!DOID:305;3.61e-08;106!DOID:0050615;8.15e-08;16!DOID:3910;7.55e-07;2!DOID:0050687;9.77e-07;143 | |ontology_enrichment_disease_v019=DOID:299;2.89e-11;25!DOID:305;3.61e-08;106!DOID:0050615;8.15e-08;16!DOID:3910;7.55e-07;2!DOID:0050687;9.77e-07;143 | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.76e-27,106;DOID:0050687,1.02e-19,143;DOID:299,1.67e-11,25;DOID:162,3.68e-10,235;DOID:14566,9.67e-10,239;DOID:0050615,6.78e-08,16;DOID:3910,4.17e-07,2;DOID:4468,8.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.90e-14!511;UBERON:0000468!2.83e-14!659;UBERON:0000481!6.70e-14!347;UBERON:0000467!1.01e-12!625;UBERON:0000480!1.49e-12!626;UBERON:0004119!2.60e-12!169;UBERON:0000925!2.60e-12!169;UBERON:0006595!2.60e-12!169;UBERON:0001007!4.62e-12!155;UBERON:0001555!4.62e-12!155;UBERON:0007026!4.62e-12!155;UBERON:0004921!5.53e-12!129;UBERON:0004185!5.53e-12!129;UBERON:0003104!2.83e-11!238;UBERON:0009142!2.83e-11!238;UBERON:0000077!2.87e-11!130;UBERON:0000922!9.66e-11!612;UBERON:0000923!8.17e-10!604;UBERON:0005291!8.17e-10!604;UBERON:0006598!8.17e-10!604;UBERON:0002532!8.17e-10!604;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0001041!3.48e-08!98;UBERON:0000063!7.45e-08!97;UBERON:0005177!1.24e-07!107;UBERON:0000475!3.65e-07!365;UBERON:0000477!5.54e-07!286;UBERON:0000466!5.73e-07!126;UBERON:0000926!9.37e-07!448;UBERON:0004120!9.37e-07!448;UBERON:0006603!9.37e-07!448 | |ontology_enrichment_uberon=UBERON:0000062!1.90e-14!511;UBERON:0000468!2.83e-14!659;UBERON:0000481!6.70e-14!347;UBERON:0000467!1.01e-12!625;UBERON:0000480!1.49e-12!626;UBERON:0004119!2.60e-12!169;UBERON:0000925!2.60e-12!169;UBERON:0006595!2.60e-12!169;UBERON:0001007!4.62e-12!155;UBERON:0001555!4.62e-12!155;UBERON:0007026!4.62e-12!155;UBERON:0004921!5.53e-12!129;UBERON:0004185!5.53e-12!129;UBERON:0003104!2.83e-11!238;UBERON:0009142!2.83e-11!238;UBERON:0000077!2.87e-11!130;UBERON:0000922!9.66e-11!612;UBERON:0000923!8.17e-10!604;UBERON:0005291!8.17e-10!604;UBERON:0006598!8.17e-10!604;UBERON:0002532!8.17e-10!604;UBERON:0002050!1.15e-09!605;UBERON:0005423!1.15e-09!605;UBERON:0001041!3.48e-08!98;UBERON:0000063!7.45e-08!97;UBERON:0005177!1.24e-07!107;UBERON:0000475!3.65e-07!365;UBERON:0000477!5.54e-07!286;UBERON:0000466!5.73e-07!126;UBERON:0000926!9.37e-07!448;UBERON:0004120!9.37e-07!448;UBERON:0006603!9.37e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002368;5.73e-09;33!UBERON:0002107;2.35e-08;19!UBERON:0006925;2.35e-08;19!UBERON:0002423;1.51e-07;25!UBERON:0004903;7.55e-07;2!UBERON:0002173;7.55e-07;2!UBERON:0002186;7.55e-07;2!UBERON:0002365;7.91e-07;31!UBERON:0002330;7.91e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002368;5.73e-09;33!UBERON:0002107;2.35e-08;19!UBERON:0006925;2.35e-08;19!UBERON:0002423;1.51e-07;25!UBERON:0004903;7.55e-07;2!UBERON:0002173;7.55e-07;2!UBERON:0002186;7.55e-07;2!UBERON:0002365;7.91e-07;31!UBERON:0002330;7.91e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,5.59e-10,82;UBERON:0005177,9.24e-10,101;UBERON:0007499,1.09e-09,25;UBERON:0005172,2.25e-09,54;UBERON:0005173,2.25e-09,54;UBERON:0009856,3.10e-09,26;UBERON:0004921,4.66e-09,118;UBERON:0002368,5.12e-09,35;UBERON:0000949,5.58e-09,45;UBERON:0002107,1.83e-08,19;UBERON:0006925,1.83e-08,19;UBERON:0008836,1.83e-08,19;UBERON:0002417,4.63e-08,60;UBERON:0000916,4.63e-08,60;UBERON:0001041,9.16e-08,87;UBERON:0001007,1.10e-07,145;UBERON:0001555,1.10e-07,145;UBERON:0007026,1.10e-07,145;UBERON:0009497,1.34e-07,25;UBERON:0000015,1.34e-07,25;UBERON:0002423,1.34e-07,25;UBERON:0006235,1.34e-07,25;UBERON:0004161,1.34e-07,25;UBERON:0002365,3.12e-07,31;UBERON:0002330,3.12e-07,31;UBERON:0002530,3.33e-07,59;UBERON:0001242,3.60e-07,4;UBERON:0001262,3.60e-07,4;UBERON:0004786,3.60e-07,4;UBERON:0004808,3.60e-07,4;UBERON:0001277,3.60e-07,4;UBERON:0003929,3.91e-07,54;UBERON:0008835,4.11e-07,22;UBERON:0003894,4.11e-07,22;UBERON:0004903,4.17e-07,2;UBERON:0002173,4.17e-07,2;UBERON:0002186,4.17e-07,2;UBERON:0004119,4.56e-07,160;UBERON:0000925,4.56e-07,160;UBERON:0006595,4.56e-07,160;UBERON:0001052,4.62e-07,4;UBERON:0009854,9.65e-07,23 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.619412741790207,0,0,0,0.689491361473237,0,1.35426486594342,0,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0,1.45104619314292,0,1.24564449799115,0,0,0,0.605399502633369,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0,0.81014194788176,0.357198913136319,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0.408308342509787,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0.30648779579902,0,0,0.179389635688862,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,1.06502877754984,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.414644220061482,0,0,0,0,0,0.464367928031979,1.44375896333917,1.0647612003586,0.168584690078102,0.482022059766964,0.661763836394364,0.871517776369625,0.474541238222193,1.07865046528132,0.784885860501384,0.38474715694639,1.4763109092493,0,0,1.47008711385542,0,0,0,0,1.59884970106048,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0.579652024875384,0.117408694235822,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,1.87467667973554,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,0.797814349754612,2.08014873822732,0,0,0,0.285955987316295,1.08524321078289,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.966875596732978,0.200506470303285,0.276242966807689,0.34444334449382,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,1.66215201785745,0.671624264166535,0,0,1.02580050046556,0.984043937099117,0.650756789328606,0.515205058238611,0,0,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0.290033387828457,0.340906509664404,0,0,0.192190067365106,0.382838137483752,0.4046311234222,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,0,0,0.48763373908959,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0.563391205064483,0,0,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.48111056362756,0,0,0.376575203107117,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,2.06312886974173,0,4.83031449570902,0,0,0.307160702099232,0,0.422008249231538,0.333926115068718,0,0,0.796991953004279,0.552567831062295,0.503865495708552,0.306806047506464,0,0,0.359473404589307,0.358042349351218,0,0.591860433821602,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0.568967241427498,1.77977555204936,3.54581522651905,0,0,0.347249989866585,0,0,0,0,0,0,0.980446171670911,0.278847488557207,0.0769502585037971,0,0.69169171316418,0.628303510868405,1.95565269459615,0,0.183195186803725,0,0,0,0,0,0,0,0,0,2.10998064528027,1.46909527343233,1.97894300007517,1.94749775767882,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0.468528891450678,0,2.93496928398135,0.242780379534093,0.789168805698781,0,0,0.189559738885464,1.35291077473043,0.829505531177977,0.664653872707185,0.992975867626496,0,0,1.42304773014896,0,2.2562765983567,1.27390116638691,0.174118413160805,0,0.343972064943233,2.70917727609438,4.09300175682639,2.38134825454307,0.484945082442097,0,0.677942222341597,0,0,0.0633107959558787,1.17330829640882,0,0.426905989478705,0.19980960958213,0.288180834308212,0,1.029569987171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| ||
|short_description=p1@ENST00000411453 | |short_description=p1@ENST00000411453 | ||
}} | }} |
Latest revision as of 15:09, 28 July 2015
Short description: | p1@ENST00000411453 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000411453_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000411453_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.54e-12 | 253 |
endodermal cell | 5.61e-10 | 58 |
hepatocyte | 2.57e-08 | 12 |
intestinal epithelial cell | 3.60e-07 | 4 |
seromucus secreting cell | 5.74e-07 | 2 |
epithelial cell of large intestine | 6.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.76e-27 | 106 |
cell type cancer | 1.02e-19 | 143 |
adenocarcinoma | 1.67e-11 | 25 |
cancer | 3.68e-10 | 235 |
disease of cellular proliferation | 9.67e-10 | 239 |
respiratory system cancer | 6.78e-08 | 16 |
lung adenocarcinoma | 4.17e-07 | 2 |
clear cell adenocarcinoma | 8.58e-07 | 2 |