FFCP PHASE1:Hg19::chr21:46888496..46888523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:46888496..46888523,+ | |||
|description=CAGE_peak_at_chr21:46888496..46888523,+ | |description=CAGE_peak_at_chr21:46888496..46888523,+ | ||
|id=chr21:46888496..46888523,+ | |id=chr21:46888496..46888523,+ | ||
|ontology_enrichment_celltype=CL:0000182;1.82e-09;12!CL:0000669;2.09e-08;4!CL:0002262;3.18e-08;2!CL:1000398;3.18e-08;2!CL:0000115;8.23e-08;36!CL:0002575;9.28e-08;2!CL:0002545;3.27e-07;2!CL:0000097;5.99e-07;5 | |ontology_enrichment_celltype=CL:0000147!1.35e-07!14;CL:0000115!4.62e-07!35;CL:0002078!9.18e-07!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.82e-09;12!CL:0000669;2.09e-08;4!CL:0002262;3.18e-08;2!CL:1000398;3.18e-08;2!CL:0000115;8.23e-08;36!CL:0002575;9.28e-08;2!CL:0002545;3.27e-07;2!CL:0000097;5.99e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.97e-09,12;CL:0000115,1.23e-08,36;CL:0000669,1.33e-08,4;CL:0002262,3.67e-08,2;CL:1000398,3.67e-08,2;CL:0002575,4.83e-08,2;CL:0002545,3.98e-07,2;CL:0000097,5.14e-07,5;CL:0002028,5.14e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;9.50e-13;19!UBERON:0006925;9.50e-13;19!UBERON:0002423;2.15e-11;25!UBERON:0001281;3.18e-08;2!UBERON:0003497;3.18e-08;2!UBERON:0003909;3.18e-08;2!UBERON:0003835;3.18e-08;2!UBERON:0005800;3.27e-07;2!UBERON:0001515;3.27e-07;2!UBERON:0002365;3.97e-07;31!UBERON:0002330;3.97e-07;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.52e-11!55;UBERON:0005173!1.52e-11!55;UBERON:0002417!1.21e-10!61;UBERON:0000916!1.21e-10!61;UBERON:0006554!2.56e-09!44;UBERON:0005256!4.18e-09!143;UBERON:0001008!6.86e-09!45;UBERON:0002100!2.86e-08!216;UBERON:0000475!2.95e-08!365;UBERON:0003064!3.23e-08!37;UBERON:0003914!4.83e-08!118;UBERON:0003929!8.97e-08!54;UBERON:0000477!1.72e-07!286;UBERON:0003937!2.42e-07!12;UBERON:0005399!2.42e-07!12;UBERON:0003103!3.33e-07!69;UBERON:0000490!3.46e-07!138;UBERON:0000468!3.96e-07!659;UBERON:0000481!7.58e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.50e-13;19!UBERON:0006925;9.50e-13;19!UBERON:0002423;2.15e-11;25!UBERON:0001281;3.18e-08;2!UBERON:0003497;3.18e-08;2!UBERON:0003909;3.18e-08;2!UBERON:0003835;3.18e-08;2!UBERON:0005800;3.27e-07;2!UBERON:0001515;3.27e-07;2!UBERON:0002365;3.97e-07;31!UBERON:0002330;3.97e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.08e-13,19;UBERON:0006925,9.08e-13,19;UBERON:0008836,9.08e-13,19;UBERON:0009497,2.16e-11,25;UBERON:0000015,2.16e-11,25;UBERON:0002423,2.16e-11,25;UBERON:0006235,2.16e-11,25;UBERON:0004161,2.16e-11,25;UBERON:0003914,2.83e-11,117;UBERON:0008835,8.71e-11,22;UBERON:0003894,8.71e-11,22;UBERON:0005172,2.33e-10,54;UBERON:0005173,2.33e-10,54;UBERON:0009854,3.05e-10,23;UBERON:0007499,2.77e-09,25;UBERON:0002417,5.64e-09,60;UBERON:0000916,5.64e-09,60;UBERON:0009856,7.35e-09,26;UBERON:0003929,1.03e-08,54;UBERON:0001281,3.67e-08,2;UBERON:0003497,3.67e-08,2;UBERON:0003909,3.67e-08,2;UBERON:0003835,3.67e-08,2;UBERON:0002365,3.69e-07,31;UBERON:0002330,3.69e-07,31;UBERON:0005800,3.98e-07,2;UBERON:0001515,3.98e-07,2;UBERON:0005103,7.97e-07,8;UBERON:0000083,7.97e-07,8;UBERON:0009201,7.97e-07,8;UBERON:0006553,7.97e-07,8;UBERON:0003074,7.97e-07,8;UBERON:0003060,7.97e-07,8 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,1.26343974685366,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,1.67799774483962,1.6507082516404,0,1.29208379584664,0.71153252537342,0.66944122552934,2.01414658554573,0,2.19655851793353,1.10298924103761,1.62028389576352,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,1.72101972449288,0.354668382198357,0,0,2.22000793575444,0.311211035399766,0.269421344139376,0.326923806226917,0.756787138224657,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,2.37600571456411,0,0,0,0,0,0,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,0,0.85422955527427,0.211931901159562,0,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.161646056818812,1.42003837006646,0.604512589365842,0,0.193260853163297,0,0,0.609868530647977,0.265059536642971,1.16193942869518,0.725627385107593,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,5.60967095213783,0,2.94017422771084,2.53510069643662,1.96565443335525,1.18157981336281,0,0.491953754172454,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.925971025153221,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,2.48793738648926,2.59415916150531,3.02981840223312,0.126995788584338,0.763976851116555,0,1.71072446022705,0.719792448923265,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0.958499421966331,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.434418072340414,1.95801157462741,3.43143423810856,0,0,0,0,0,0,0,0,0.561320188866147,0.256278298511402,0,0,0,0,0.177561725313127,0,0.519254429183621,0,2.29632954224082,1.20303882181971,0.0920809889358963,0.34444334449382,0.182091168006717,1.44236856455367,0,0.308061348417659,0,4.38417673959782,0.527758144464379,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,0.812839312631559,3.01013864312912,0,0,0.671624264166535,0,0,0.256450125116389,2.29610251989794,1.30151357865721,1.95777922130672,0.0915694648183434,0,0,0,0,0.96670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0.356128142586949,0,0.192190067365106,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0,0,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0.545999645631943,1.55545975149084,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,1.69290568708354,0,0,0,0,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0.421996129056054,0.652931232636591,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0,2.97035336011451,0,0,0,0,1.26085721434945,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,1.28071796843612,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0,0,1.15580235960608,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.201550417460179,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,1.60753148465019,1.78801267576404,1.24632101408756,0,0,0,0.335434687599266,0.236417121897595,0.157363764404994,0.105600336519406,0,0,2.1440859791201,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,6.00864158080138,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0.314108192500469,0,0.122026264901963,0,0,0.221858103073705,0,0,0.124980407962107,0,0.856396000634902,0.470531639396343,0,0,0,0.467426619694449,0,0,0.251567901752575,0.889811221596536,0,0.453692771289717,0.310874401165561,0,0.318593534327405,0.449803112163605,0,0,0,0,0,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| ||
|short_description=p@chr21:46888496..46888523,+ | |short_description=p@chr21:46888496..46888523,+ | ||
}} | }} |
Latest revision as of 18:37, 28 July 2015
Short description: | p@chr21:46888496..46888523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46888496..46888523, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.97e-09 | 12 |
endothelial cell | 1.23e-08 | 36 |
pericyte cell | 1.33e-08 | 4 |
endothelial cell of sinusoid | 3.67e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.67e-08 | 2 |
central nervous system pericyte | 4.83e-08 | 2 |
thoracic aorta endothelial cell | 3.98e-07 | 2 |
mast cell | 5.14e-07 | 5 |
basophil mast progenitor cell | 5.14e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 9.08e-13 | 19 |
digestive gland | 9.08e-13 | 19 |
liver bud | 9.08e-13 | 19 |
epithelium of foregut-midgut junction | 2.16e-11 | 25 |
anatomical boundary | 2.16e-11 | 25 |
hepatobiliary system | 2.16e-11 | 25 |
foregut-midgut junction | 2.16e-11 | 25 |
septum transversum | 2.16e-11 | 25 |
epithelial tube | 2.83e-11 | 117 |
hepatic diverticulum | 8.71e-11 | 22 |
liver primordium | 8.71e-11 | 22 |
abdomen element | 2.33e-10 | 54 |
abdominal segment element | 2.33e-10 | 54 |
digestive tract diverticulum | 3.05e-10 | 23 |
epithelial sac | 2.77e-09 | 25 |
abdominal segment of trunk | 5.64e-09 | 60 |
abdomen | 5.64e-09 | 60 |
sac | 7.35e-09 | 26 |
gut epithelium | 1.03e-08 | 54 |
hepatic sinusoid | 3.67e-08 | 2 |
abdomen blood vessel | 3.67e-08 | 2 |
sinusoid | 3.67e-08 | 2 |
abdominal segment blood vessel | 3.67e-08 | 2 |
exocrine gland | 3.69e-07 | 31 |
exocrine system | 3.69e-07 | 31 |
segment of aorta | 3.98e-07 | 2 |
thoracic aorta | 3.98e-07 | 2 |
mesonephric epithelium | 7.97e-07 | 8 |
mesonephric tubule | 7.97e-07 | 8 |
nephric duct | 7.97e-07 | 8 |
renal duct | 7.97e-07 | 8 |
mesonephric duct | 7.97e-07 | 8 |
pronephric duct | 7.97e-07 | 8 |