FFCP PHASE1:Hg19::chr22:17082235..17082275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:17082235..17082275,+ | |||
|coexpression_cluster_id=C4085 | |||
|description=CAGE_peak_at_chr22:17082235..17082275,+ | |description=CAGE_peak_at_chr22:17082235..17082275,+ | ||
|id=chr22:17082235..17082275,+ | |id=chr22:17082235..17082275,+ | ||
|ontology_enrichment_celltype=CL:0000839!4.10e-24!70;CL:0000557!9.46e-24!71;CL:0000766!3.04e-23!76;CL:0002009!2.37e-20!65;CL:0002194!4.59e-20!63;CL:0000576!4.59e-20!63;CL:0000040!4.59e-20!63;CL:0000559!4.59e-20!63;CL:0002057!1.19e-19!42;CL:0000860!5.13e-17!45;CL:0000763!1.70e-16!112;CL:0000049!1.70e-16!112;CL:0000738!5.47e-07!140;CL:0002031!5.47e-07!124 | |ontology_enrichment_celltype=CL:0000839!4.10e-24!70;CL:0000557!9.46e-24!71;CL:0000766!3.04e-23!76;CL:0002009!2.37e-20!65;CL:0002194!4.59e-20!63;CL:0000576!4.59e-20!63;CL:0000040!4.59e-20!63;CL:0000559!4.59e-20!63;CL:0002057!1.19e-19!42;CL:0000860!5.13e-17!45;CL:0000763!1.70e-16!112;CL:0000049!1.70e-16!112;CL:0000738!5.47e-07!140;CL:0002031!5.47e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.32e-18;33!CL:0002057;4.32e-18;33!CL:0000473;8.81e-17;39!CL:0000234;8.81e-17;39!CL:0000766;2.08e-13;69!CL:0000576;2.91e-13;48!CL:0000763;9.74e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.30e-29,66;CL:0000766,1.59e-29,72;CL:0000557,1.44e-28,67;CL:0000763,4.63e-25,108;CL:0000049,4.63e-25,108;CL:0000473,2.21e-24,48;CL:0000234,2.21e-24,48;CL:0002194,1.17e-23,59;CL:0000576,1.17e-23,59;CL:0000040,1.17e-23,59;CL:0000559,1.17e-23,59;CL:0002009,1.33e-23,61;CL:0000860,6.66e-22,42;CL:0002057,6.66e-22,42;CL:0002032,1.21e-11,161;CL:0000837,1.21e-11,161;CL:0000037,2.07e-11,168;CL:0002031,4.05e-11,120;CL:0000738,3.61e-10,136;CL:0000988,6.69e-10,177;CL:0002087,4.70e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.10e-15;42!CL:0000049;5.65e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-23!115;UBERON:0002390!2.65e-22!102;UBERON:0003061!2.65e-22!102;UBERON:0002371!4.40e-20!80;UBERON:0002193!1.05e-19!112;UBERON:0001474!3.85e-17!86;UBERON:0004765!1.59e-14!101;UBERON:0001434!1.59e-14!101;UBERON:0003081!5.08e-12!216;UBERON:0002204!1.97e-10!167;UBERON:0002405!3.25e-10!115;UBERON:0000467!9.45e-08!625;UBERON:0000480!1.30e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.66e-24,76;UBERON:0002390,9.34e-24,98;UBERON:0003061,9.34e-24,98;UBERON:0002193,1.22e-21,108;UBERON:0001474,2.89e-21,82;UBERON:0004765,7.86e-20,90;UBERON:0002405,1.21e-18,93;UBERON:0001434,3.72e-16,100;UBERON:0007023,4.52e-12,114;UBERON:0002204,3.53e-11,167;UBERON:0003081,7.99e-10,203 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,2.00146596706261,1.78784437770915,0.872338524100369,0,1.89515962028049,2.35067065379855,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.91914699048606,1.70297735647684,0,3.614471025339,2.21852406100073,0,0,1.76160263600908,2.21598163412751,1.20326668482085,0.217010870715852,1.11957737119962,0,0.515151135268373,2.03557534291391,0.755751887377619,5.09426528494414,1.39457422143411,2.46700732813095,4.02618282163635,2.01384674625505,1.2808035326455,3.78371567821736,1.72372840368309,2.5819387343353,10.8341189275473,2.07066573496865,0.545812300115692,3.82029923556644,2.75475503133812,1.60464513538047,1.91801137739712,1.31940520074686,2.39356389145958,4.26224750532694,0.870627715885752,3.97169657283798,4.35975574296902,1.7587406567972,2.08593167368081,3.9093992046921,3.02699751316684,1.84138817993782,2.84816148696796,1.69004229049553,0.637812899895131,0.209658645508376,1.57260083605093,0.901061357049038,0.32145117339416,2.85012743741249,6.56425034756997,2.92262646023414,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,4.48406850385229,1.31692042387539,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0.741432815810302,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,1.15076305659177,0,0,0,0,0,0.567208902984407,0.221729397462564,0.527008714158756,0.458426764241994,2.91436230634034,5.19098219898201,1.9472843619281,1.39303789839414,1.59549552622638,0,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.662045904066094,0.860509862246441,2.4826786753885,0,0,0,1.24484414159907,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,1.02077085627447,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0.554128230968366,0,0.30648779579902,0,0,0,0,0.423863802319124,0.300091096084402,0.412210116953756,0,0,0.168776332241266,0,0.252433774244115,0.460249493211497,1.13152239773168,0,0,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,1.91005047582099,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0.492434012174795,1.8720341211139,1.33768046059855,0,2.01578553838631,1.70130116690864,0.179117045405697,0.581267877027924,0.383382679165211,4.92663237895944,2.28925928434388,4.14656231081544,4.61183850934277,2.14612136824846,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.099972991182057,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0.579125226670317,0.821905290201534,1.43248770591916,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,1.49801404789436,0,4.97298616123243,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.862856803274467,0.853820462427555,0,0,0,0.248107807818777,1.2276957863045,0.841980283299221,0.256278298511402,3.07024349440022,0.321707842287215,0,0.462629081407967,1.24293207719189,0.164254312027618,0.519254429183621,0.348631135379878,0,0.802025881213139,4.60404944679482,0.229628896329213,2.1850940160806,0.393373244878272,0.902399225814824,1.30926073077505,0.784349769176855,0,0.73886140225013,0,0,0,0,0,0.501689773854853,1.52925763827023,2.49322802678617,0.895499018888713,2.63111851975121,1.5686127061494,2.3080511260475,0.656029291399411,0.976135183992909,1.75169719801128,0,0.082509499920588,1.14853107599234,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,0.638063562472921,1.4162089319777,0,0,1.3940745403212,0.616067160352178,1.06461206063404,0.869932992075073,1.66791797193528,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,1.41527737101321,0,3.79132610615083,0.48763373908959,0.487426979262569,0,1.09199929126389,2.12108147930569,1.13008116620243,0.551365343546124,1.99031692572366,0,0,0,0,0,0.281695602532241,0,0,0,1.41904425628239,0,0.329294892959902,0,0,2.88666338176536,5.3624182042863,5.44454924306613,1.97701981631236,4.3050537267123,1.68471475667626,7.09488245658681,2.06751060186264,3.55213326462519,0.764637207142375,7.40541343326411,2.1440859791201,2.05681136543097,3.8908398671563,2.70015718619057,6.34500141035416,0,0,2.45040215981032,0,0,2.70339004723974,2.55082036366116,0,0,0,0,0,0,0,10.0253790836027,0,0,0,5.11015485228392,0,1.53620382154229,0.894704431569664,1.83534055883099,0,1.67043704337145,0,0,0,0,0,1.02555725490326,0.242721043499027,0,0,0,0,0,0,0.562677665642051,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,2.3948309234694,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.6029821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| ||
|short_description=p@chr22:17082235..17082275,+ | |short_description=p@chr22:17082235..17082275,+ | ||
}} | }} |
Latest revision as of 18:55, 28 July 2015
Short description: | p@chr22:17082235..17082275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:17082235..17082275, + |
Coexpression cluster: | C4085_chronic_acute_optic_medulloblastoma_Whole_mesothelioma_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.30e-29 | 66 |
myeloid leukocyte | 1.59e-29 | 72 |
granulocyte monocyte progenitor cell | 1.44e-28 | 67 |
myeloid cell | 4.63e-25 | 108 |
common myeloid progenitor | 4.63e-25 | 108 |
defensive cell | 2.21e-24 | 48 |
phagocyte | 2.21e-24 | 48 |
monopoietic cell | 1.17e-23 | 59 |
monocyte | 1.17e-23 | 59 |
monoblast | 1.17e-23 | 59 |
promonocyte | 1.17e-23 | 59 |
macrophage dendritic cell progenitor | 1.33e-23 | 61 |
classical monocyte | 6.66e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.66e-22 | 42 |
hematopoietic oligopotent progenitor cell | 1.21e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-11 | 161 |
hematopoietic stem cell | 2.07e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 4.05e-11 | 120 |
leukocyte | 3.61e-10 | 136 |
hematopoietic cell | 6.69e-10 | 177 |
nongranular leukocyte | 4.70e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.66e-24 | 76 |
hematopoietic system | 9.34e-24 | 98 |
blood island | 9.34e-24 | 98 |
hemolymphoid system | 1.22e-21 | 108 |
bone element | 2.89e-21 | 82 |
skeletal element | 7.86e-20 | 90 |
immune system | 1.21e-18 | 93 |
skeletal system | 3.72e-16 | 100 |
adult organism | 4.52e-12 | 114 |
musculoskeletal system | 3.53e-11 | 167 |
lateral plate mesoderm | 7.99e-10 | 203 |