FFCP PHASE1:Hg19::chr22:37475107..37475111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37475107..37475111,- | |||
|coexpression_cluster_id=C783 | |coexpression_cluster_id=C783 | ||
|description=CAGE_peak_at_chr22:37475107..37475111,- | |description=CAGE_peak_at_chr22:37475107..37475111,- | ||
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|ontology_enrichment_celltype=CL:0000080!2.92e-23!6;CL:0000623!2.64e-08!3;CL:0000825!2.64e-08!3;CL:0000842!5.07e-08!3;CL:0000838!4.28e-07!52;CL:0000542!6.21e-07!53;CL:0000051!6.21e-07!53 | |ontology_enrichment_celltype=CL:0000080!2.92e-23!6;CL:0000623!2.64e-08!3;CL:0000825!2.64e-08!3;CL:0000842!5.07e-08!3;CL:0000838!4.28e-07!52;CL:0000542!6.21e-07!53;CL:0000051!6.21e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.33e-15;2 | |ontology_enrichment_celltype_v019=CL:0002535;1.33e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.33e-15,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!4.97e-07!1;DOID:0060061!4.97e-07!1;DOID:8691!4.97e-07!1;DOID:630!6.60e-07!1;DOID:0050177!6.60e-07!1;DOID:0050427!6.60e-07!1 | |ontology_enrichment_disease=DOID:0060060!4.97e-07!1;DOID:0060061!4.97e-07!1;DOID:8691!4.97e-07!1;DOID:630!6.60e-07!1;DOID:0050177!6.60e-07!1;DOID:0050427!6.60e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;5.08e-07;5 | |ontology_enrichment_disease_v019=DOID:4362;5.08e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.65e-09!15;UBERON:0000179!3.65e-09!15;UBERON:0000463!3.65e-09!15;UBERON:0002171!5.89e-07!1;UBERON:0006518!5.89e-07!1;UBERON:0008949!5.89e-07!1;UBERON:0000101!5.89e-07!1;UBERON:0002167!5.89e-07!1;UBERON:0002135!6.99e-07!1 | |ontology_enrichment_uberon=UBERON:0000178!3.65e-09!15;UBERON:0000179!3.65e-09!15;UBERON:0000463!3.65e-09!15;UBERON:0002171!5.89e-07!1;UBERON:0006518!5.89e-07!1;UBERON:0008949!5.89e-07!1;UBERON:0000101!5.89e-07!1;UBERON:0002167!5.89e-07!1;UBERON:0002135!6.99e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.07e-26;10!UBERON:0000178;1.23e-17;15!UBERON:0000179;1.23e-17;15!UBERON:0000463;1.23e-17;15!UBERON:0006955;1.33e-15;2!UBERON:0004801;1.33e-15;2!UBERON:0000478;2.61e-11;24!UBERON:0002390;9.75e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;5.07e-26;10!UBERON:0000178;1.23e-17;15!UBERON:0000179;1.23e-17;15!UBERON:0000463;1.23e-17;15!UBERON:0006955;1.33e-15;2!UBERON:0004801;1.33e-15;2!UBERON:0000478;2.61e-11;24!UBERON:0002390;9.75e-09;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.66e-26,10;UBERON:0000358,4.66e-26,10;UBERON:0000307,4.66e-26,10;UBERON:0000091,4.66e-26,10;UBERON:0000087,4.66e-26,10;UBERON:0007010,4.66e-26,10;UBERON:0007806,4.66e-26,10;UBERON:0008780,4.66e-26,10;UBERON:0005728,4.66e-26,10;UBERON:0000178,1.17e-17,15;UBERON:0000179,1.17e-17,15;UBERON:0000463,1.17e-17,15;UBERON:0006955,1.33e-15,2;UBERON:0004801,1.33e-15,2;UBERON:0000478,2.52e-11,24 | |||
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|short_description=p@chr22:37475107..37475111,- | |short_description=p@chr22:37475107..37475111,- | ||
}} | }} |
Latest revision as of 20:53, 28 July 2015
Short description: | p@chr22:37475107..37475111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37475107..37475111, - |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.33e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.66e-26 | 10 |
blastocyst | 4.66e-26 | 10 |
blastula | 4.66e-26 | 10 |
bilaminar disc | 4.66e-26 | 10 |
inner cell mass | 4.66e-26 | 10 |
cleaving embryo | 4.66e-26 | 10 |
connecting stalk | 4.66e-26 | 10 |
inner cell mass derived epiblast | 4.66e-26 | 10 |
extraembryonic mesoderm | 4.66e-26 | 10 |
blood | 1.17e-17 | 15 |
haemolymphatic fluid | 1.17e-17 | 15 |
organism substance | 1.17e-17 | 15 |
uterine epithelium | 1.33e-15 | 2 |
cervix epithelium | 1.33e-15 | 2 |
extraembryonic structure | 2.52e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.08e-07 | 5 |