FFCP PHASE1:Hg19::chr22:48027586..48027597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=134bp_to_uc003bij.2,uc003bik.1_5end | |association_with_transcript=134bp_to_uc003bij.2,uc003bik.1_5end | ||
|cluster_id=chr22:48027586..48027597,+ | |||
|description=CAGE_peak_5_at_uc003bij.2_5end,CAGE_peak_5_at_uc003bik.1_5end | |description=CAGE_peak_5_at_uc003bij.2_5end,CAGE_peak_5_at_uc003bik.1_5end | ||
|id=chr22:48027586..48027597,+ | |id=chr22:48027586..48027597,+ | ||
|ontology_enrichment_celltype=CL:1000415!9.55e-11!2 | |ontology_enrichment_celltype=CL:1000415!9.55e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.32e-26;2!CL:0001016;4.32e-26;2!CL:0002327;1.00e-13;4!CL:0000453;2.66e-11;5!CL:0000840;1.22e-09;5!CL:0000990;7.48e-07;8 | |ontology_enrichment_celltype_v019=CL:0001014;4.32e-26;2!CL:0001016;4.32e-26;2!CL:0002327;1.00e-13;4!CL:0000453;2.66e-11;5!CL:0000840;1.22e-09;5!CL:0000990;7.48e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.32e-26,2;CL:0001016,4.32e-26,2;CL:0002327,1.00e-13,4;CL:0000453,2.66e-11,5;CL:0000840,1.22e-09,5;CL:0001029,1.22e-09,5;CL:0000990,7.48e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.42e-50;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.42e-50;1 | ||
|ontology_enrichment_disease=DOID:0050687!2.52e-19!143;DOID:162!6.35e-16!235;DOID:14566!1.90e-15!239;DOID:1749!2.24e-12!14;DOID:305!8.97e-10!106;DOID:7!8.63e-09!39 | |ontology_enrichment_disease=DOID:0050687!2.52e-19!143;DOID:162!6.35e-16!235;DOID:14566!1.90e-15!239;DOID:1749!2.24e-12!14;DOID:305!8.97e-10!106;DOID:7!8.63e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:1909;8.10e-26;2!DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4 | |ontology_enrichment_disease_v019=DOID:1909;8.10e-26;2!DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,9.18e-26,2;DOID:5093,1.00e-13,4;DOID:1612,1.00e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0003343!8.88e-12!4;UBERON:0004785!8.88e-12!4;UBERON:0003729!1.62e-09!5;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3 | |ontology_enrichment_uberon=UBERON:0003343!8.88e-12!4;UBERON:0004785!8.88e-12!4;UBERON:0003729!1.62e-09!5;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.00e-13;4 | |ontology_enrichment_uberon_v019=UBERON:0001911;1.00e-13;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.00e-13,4;UBERON:0005333,1.00e-13,4;UBERON:0008425,1.00e-13,4;UBERON:0005311,1.00e-13,4;UBERON:0000076,1.59e-07,8 | |||
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|short_description=p5@uc003bij.2,p5@uc003bik.1 | |short_description=p5@uc003bij.2,p5@uc003bik.1 | ||
}} | }} |
Latest revision as of 22:13, 28 July 2015
Short description: | p5@uc003bij.2, p5@uc003bik.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_uc003bij.2_5end, CAGE_peak_5_at_uc003bik.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 134bp_to_uc003bij.2, uc003bik.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.32e-26 | 2 |
immature CD1a-positive Langerhans cell | 4.32e-26 | 2 |
mammary gland epithelial cell | 1.00e-13 | 4 |
Langerhans cell | 2.66e-11 | 5 |
immature conventional dendritic cell | 1.22e-09 | 5 |
common dendritic progenitor | 1.22e-09 | 5 |
conventional dendritic cell | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.00e-13 | 4 |
mammary bud | 1.00e-13 | 4 |
mammary ridge | 1.00e-13 | 4 |
mammary placode | 1.00e-13 | 4 |
external ectoderm | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.18e-26 | 2 |
thoracic cancer | 1.00e-13 | 4 |
breast cancer | 1.00e-13 | 4 |