FFCP PHASE1:Hg19::chr2:165701544..165701556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:165701544..165701556,+ | |||
|coexpression_cluster_id=C1882 | |coexpression_cluster_id=C1882 | ||
|description=CAGE_peak_at_chr2:165701544..165701556,+ | |description=CAGE_peak_at_chr2:165701544..165701556,+ | ||
|id=chr2:165701544..165701556,+ | |id=chr2:165701544..165701556,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.77e-11;10!UBERON:0007687;6.77e-11;10!UBERON:0003104;4.32e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;5.36e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002298!3.23e-30!8;UBERON:0001049!2.40e-24!57;UBERON:0005068!2.40e-24!57;UBERON:0006241!2.40e-24!57;UBERON:0007135!2.40e-24!57;UBERON:0003076!9.99e-21!15;UBERON:0003057!9.99e-21!15;UBERON:0007023!2.76e-18!115;UBERON:0002616!4.76e-18!59;UBERON:0003075!7.93e-17!86;UBERON:0007284!7.93e-17!86;UBERON:0005743!1.37e-16!86;UBERON:0001896!2.19e-16!3;UBERON:0005290!2.19e-16!3;UBERON:0010096!2.19e-16!3;UBERON:0002346!6.64e-16!90;UBERON:0006331!1.34e-15!3;UBERON:0001017!1.39e-15!82;UBERON:0000988!2.11e-15!3;UBERON:0004733!9.51e-15!12;UBERON:0002028!9.51e-15!12;UBERON:0007277!9.51e-15!12;UBERON:0000955!1.02e-14!69;UBERON:0006238!1.02e-14!69;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0004732!1.43e-13!13;UBERON:0002148!6.10e-11!2;UBERON:0009662!6.10e-11!2;UBERON:0002780!3.16e-10!41;UBERON:0001890!3.16e-10!41;UBERON:0006240!3.16e-10!41;UBERON:0002020!5.02e-10!34;UBERON:0003528!5.02e-10!34;UBERON:0003080!6.00e-10!42;UBERON:0000033!3.77e-09!123;UBERON:0002308!5.40e-09!9;UBERON:0000125!5.40e-09!9;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0000002!1.97e-08!6;UBERON:0001560!1.97e-08!6;UBERON:0002240!4.87e-08!3;UBERON:0003056!8.89e-08!61;UBERON:0002771!1.08e-07!3;UBERON:0001894!2.69e-07!7;UBERON:0006222!2.69e-07!7 | |ontology_enrichment_uberon=UBERON:0002298!3.23e-30!8;UBERON:0001049!2.40e-24!57;UBERON:0005068!2.40e-24!57;UBERON:0006241!2.40e-24!57;UBERON:0007135!2.40e-24!57;UBERON:0003076!9.99e-21!15;UBERON:0003057!9.99e-21!15;UBERON:0007023!2.76e-18!115;UBERON:0002616!4.76e-18!59;UBERON:0003075!7.93e-17!86;UBERON:0007284!7.93e-17!86;UBERON:0005743!1.37e-16!86;UBERON:0001896!2.19e-16!3;UBERON:0005290!2.19e-16!3;UBERON:0010096!2.19e-16!3;UBERON:0002346!6.64e-16!90;UBERON:0006331!1.34e-15!3;UBERON:0001017!1.39e-15!82;UBERON:0000988!2.11e-15!3;UBERON:0004733!9.51e-15!12;UBERON:0002028!9.51e-15!12;UBERON:0007277!9.51e-15!12;UBERON:0000955!1.02e-14!69;UBERON:0006238!1.02e-14!69;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0004732!1.43e-13!13;UBERON:0002148!6.10e-11!2;UBERON:0009662!6.10e-11!2;UBERON:0002780!3.16e-10!41;UBERON:0001890!3.16e-10!41;UBERON:0006240!3.16e-10!41;UBERON:0002020!5.02e-10!34;UBERON:0003528!5.02e-10!34;UBERON:0003080!6.00e-10!42;UBERON:0000033!3.77e-09!123;UBERON:0002308!5.40e-09!9;UBERON:0000125!5.40e-09!9;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0000002!1.97e-08!6;UBERON:0001560!1.97e-08!6;UBERON:0002240!4.87e-08!3;UBERON:0003056!8.89e-08!61;UBERON:0002771!1.08e-07!3;UBERON:0001894!2.69e-07!7;UBERON:0006222!2.69e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.40e-14;2!UBERON:0002757;9.40e-14;2!UBERON:0010134;9.40e-14;2!UBERON:0005408;9.40e-14;2!UBERON:0001899;9.40e-14;2!UBERON:0003296;1.59e-07;4!UBERON:0010133;1.59e-07;4!UBERON:0002784;1.59e-07;4!UBERON:0001052;1.86e-07;4!UBERON:0000995;7.21e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.40e-14,2;UBERON:0002757,9.40e-14,2;UBERON:0010134,9.40e-14,2;UBERON:0005408,9.40e-14,2;UBERON:0001899,9.40e-14,2;UBERON:0003296,1.59e-07,4;UBERON:0010133,1.59e-07,4;UBERON:0002784,1.59e-07,4;UBERON:0001052,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,1.74962768029953,0,0,0,0,0,0,0,0.10893846351899,10.8750520537311,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2382104792811,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,7.88057072991982,1.62609223218494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35398605553177,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,1.96190514319652,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.329821550236287,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,1.74962768029953,0,0,0,0,0,0,0,0.10893846351899,10.8750520537311,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2382104792811,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,7.88057072991982,1.62609223218494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35398605553177,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,1.96190514319652,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.329821550236287,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:165701544..165701556,+ | |short_description=p@chr2:165701544..165701556,+ | ||
}} | }} |
Latest revision as of 02:04, 29 July 2015
Short description: | p@chr2:165701544..165701556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:165701544..165701556, + |
Coexpression cluster: | C1882_endometrial_cervical_kidney_pineal_carcinoid_rectal_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 9.40e-14 | 2 |
regional part of epithalamus | 9.40e-14 | 2 |
secretory circumventricular organ | 9.40e-14 | 2 |
circumventricular organ | 9.40e-14 | 2 |
epithalamus | 9.40e-14 | 2 |
gland of diencephalon | 1.59e-07 | 4 |
neuroendocrine gland | 1.59e-07 | 4 |
regional part of diencephalon | 1.59e-07 | 4 |
rectum | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.00e-08 | 14 |