FFCP PHASE1:Hg19::chr2:179560814..179560877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:179560814..179560877,- | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr2:179560814..179560877,- | |description=CAGE_peak_at_chr2:179560814..179560877,- | ||
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|ontology_enrichment_celltype=CL:0000542!4.52e-10!53;CL:0000051!4.52e-10!53;CL:0000838!2.53e-09!52;CL:0000945!8.38e-09!24;CL:0000826!8.38e-09!24;CL:0000236!6.96e-07!14 | |ontology_enrichment_celltype=CL:0000542!4.52e-10!53;CL:0000051!4.52e-10!53;CL:0000838!2.53e-09!52;CL:0000945!8.38e-09!24;CL:0000826!8.38e-09!24;CL:0000236!6.96e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.39e-08;13 | |ontology_enrichment_celltype_v019=CL:0000236;1.39e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.83e-08,14;CL:0000817,6.20e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.71e-12;4!UBERON:0007284;5.71e-12;4!UBERON:0006603;3.71e-07;65!UBERON:0003056;5.31e-07;3 | |ontology_enrichment_development_v019=UBERON:0005062;5.71e-12;4!UBERON:0007284;5.71e-12;4!UBERON:0006603;3.71e-07;65!UBERON:0003056;5.31e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;4.96e-11;2 | |ontology_enrichment_disease_v019=DOID:114;4.96e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,4.72e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-16!115;UBERON:0004151!7.19e-07!3;UBERON:0003978!8.33e-07!3;UBERON:0009751!8.33e-07!3;UBERON:0000946!8.33e-07!3;UBERON:0002523!8.33e-07!3;UBERON:0005983!8.33e-07!3;UBERON:0002165!8.33e-07!3;UBERON:0002062!8.33e-07!3;UBERON:0007280!8.33e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.97e-16!115;UBERON:0004151!7.19e-07!3;UBERON:0003978!8.33e-07!3;UBERON:0009751!8.33e-07!3;UBERON:0000946!8.33e-07!3;UBERON:0002523!8.33e-07!3;UBERON:0005983!8.33e-07!3;UBERON:0002165!8.33e-07!3;UBERON:0002062!8.33e-07!3;UBERON:0007280!8.33e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.99e-16;3!UBERON:0003978;8.49e-16;3!UBERON:0000946;8.49e-16;3!UBERON:0007100;1.09e-14;25!UBERON:0005090;1.86e-11;2!UBERON:0001630;1.86e-11;2!UBERON:0002081;3.16e-11;2!UBERON:0002133;4.72e-11;2!UBERON:0000341;5.08e-11;2!UBERON:0001723;6.75e-08;3!UBERON:0001033;6.75e-08;3!UBERON:0001134;1.08e-07;16!UBERON:0002036;1.08e-07;16!UBERON:0000948;1.10e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004151;5.99e-16;3!UBERON:0003978;8.49e-16;3!UBERON:0000946;8.49e-16;3!UBERON:0007100;1.09e-14;25!UBERON:0005090;1.86e-11;2!UBERON:0001630;1.86e-11;2!UBERON:0002081;3.16e-11;2!UBERON:0002133;4.72e-11;2!UBERON:0000341;5.08e-11;2!UBERON:0001723;6.75e-08;3!UBERON:0001033;6.75e-08;3!UBERON:0001134;1.08e-07;16!UBERON:0002036;1.08e-07;16!UBERON:0000948;1.10e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,6.00e-16,3;UBERON:0003978,8.92e-16,3;UBERON:0009751,8.92e-16,3;UBERON:0000946,8.92e-16,3;UBERON:0002523,8.92e-16,3;UBERON:0005983,8.92e-16,3;UBERON:0002165,8.92e-16,3;UBERON:0002062,8.92e-16,3;UBERON:0007280,8.92e-16,3;UBERON:0007100,1.79e-13,27;UBERON:0005090,1.91e-11,2;UBERON:0001630,1.91e-11,2;UBERON:0007023,2.99e-11,114;UBERON:0002081,3.17e-11,2;UBERON:0010227,3.17e-11,2;UBERON:0002133,4.96e-11,2;UBERON:0000341,5.21e-11,2;UBERON:0003103,1.16e-09,68;UBERON:0001723,6.75e-08,3;UBERON:0001033,6.75e-08,3;UBERON:0010056,6.75e-08,3;UBERON:0004797,5.25e-07,7;UBERON:0000948,5.52e-07,24;UBERON:0005498,5.52e-07,24;UBERON:0004140,5.52e-07,24;UBERON:0009881,5.52e-07,24;UBERON:0004141,5.52e-07,24;UBERON:0003084,5.52e-07,24;UBERON:0007005,5.52e-07,24;UBERON:0004139,5.52e-07,24;UBERON:0004291,5.52e-07,24 | |||
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| ||
|short_description=p@chr2:179560814..179560877,- | |short_description=p@chr2:179560814..179560877,- | ||
}} | }} |
Latest revision as of 03:36, 29 July 2015
Short description: | p@chr2:179560814..179560877, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:179560814..179560877, - |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.83e-08 | 14 |
precursor B cell | 6.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 6.00e-16 | 3 |
valve | 8.92e-16 | 3 |
cardiac mesenchyme | 8.92e-16 | 3 |
cardial valve | 8.92e-16 | 3 |
tunica intima | 8.92e-16 | 3 |
heart layer | 8.92e-16 | 3 |
endocardium | 8.92e-16 | 3 |
endocardial cushion | 8.92e-16 | 3 |
presumptive endocardium | 8.92e-16 | 3 |
primary circulatory organ | 1.79e-13 | 27 |
muscle structure | 1.91e-11 | 2 |
muscle organ | 1.91e-11 | 2 |
adult organism | 2.99e-11 | 114 |
cardiac atrium | 3.17e-11 | 2 |
future cardiac atrium | 3.17e-11 | 2 |
atrioventricular valve | 4.96e-11 | 2 |
throat | 5.21e-11 | 2 |
compound organ | 1.16e-09 | 68 |
tongue | 6.75e-08 | 3 |
gustatory system | 6.75e-08 | 3 |
future tongue | 6.75e-08 | 3 |
blood vessel layer | 5.25e-07 | 7 |
heart | 5.52e-07 | 24 |
primitive heart tube | 5.52e-07 | 24 |
primary heart field | 5.52e-07 | 24 |
anterior lateral plate mesoderm | 5.52e-07 | 24 |
heart tube | 5.52e-07 | 24 |
heart primordium | 5.52e-07 | 24 |
cardiac mesoderm | 5.52e-07 | 24 |
cardiogenic plate | 5.52e-07 | 24 |
heart rudiment | 5.52e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.72e-11 | 2 |