FFCP PHASE1:Hg19::chr2:227517160..227517177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:227517160..227517177,- | |||
|description=CAGE_peak_at_chr2:227517160..227517177,- | |description=CAGE_peak_at_chr2:227517160..227517177,- | ||
|id=chr2:227517160..227517177,- | |id=chr2:227517160..227517177,- | ||
|ontology_enrichment_celltype=CL:0000223!8.54e-13!59;CL:0002076!1.08e-12!43;CL:0000066!1.33e-11!254;CL:0000548!7.00e-09!679;CL:0000004!7.00e-09!679;CL:0000255!7.00e-09!679;CL:0000012!1.17e-08!682;CL:0002368!4.32e-08!13;CL:0000220!1.42e-07!246;CL:0002321!2.23e-07!248 | |ontology_enrichment_celltype=CL:0000223!8.54e-13!59;CL:0002076!1.08e-12!43;CL:0000066!1.33e-11!254;CL:0000548!7.00e-09!679;CL:0000004!7.00e-09!679;CL:0000255!7.00e-09!679;CL:0000012!1.17e-08!682;CL:0002368!4.32e-08!13;CL:0000220!1.42e-07!246;CL:0002321!2.23e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002202;3.35e-21;9!CL:0002632;3.35e-21;9!CL:0002368;5.25e-21;13!CL:0002195;2.46e-16;2!CL:0002571;2.46e-16;2!CL:0000322;2.38e-11;3!CL:0000307;3.33e-11;3!CL:0002076;9.78e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.34e-21,9;CL:0002632,2.34e-21,9;CL:0002368,3.89e-21,13;CL:0002195,1.60e-16,2;CL:0002571,1.60e-16,2;CL:0002076,1.52e-13,42;CL:0000322,1.84e-11,3;CL:0000068,3.42e-11,3;CL:0000069,3.42e-11,3;CL:0000307,3.42e-11,3;CL:0000377,3.42e-11,3;CL:0000223,1.95e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000377;3.33e-11;3!CL:0000223;8.85e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!8.91e-11!14;DOID:305!1.43e-08!106;DOID:3908!6.48e-07!5 | |ontology_enrichment_disease=DOID:1749!8.91e-11!14;DOID:305!1.43e-08!106;DOID:3908!6.48e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.48e-16;2!DOID:3347;7.26e-09;1!DOID:3908;3.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.00e-16,2;DOID:3347,6.22e-09,1;DOID:3908,3.25e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.78e-09!169;UBERON:0000925!5.78e-09!169;UBERON:0006595!5.78e-09!169;UBERON:0005911!6.15e-08!82;UBERON:0001007!1.43e-07!155;UBERON:0001555!1.43e-07!155;UBERON:0007026!1.43e-07!155;UBERON:0002100!2.78e-07!216;UBERON:0005256!6.72e-07!143;UBERON:0000490!7.28e-07!138 | |ontology_enrichment_uberon=UBERON:0004119!5.78e-09!169;UBERON:0000925!5.78e-09!169;UBERON:0006595!5.78e-09!169;UBERON:0005911!6.15e-08!82;UBERON:0001007!1.43e-07!155;UBERON:0001555!1.43e-07!155;UBERON:0007026!1.43e-07!155;UBERON:0002100!2.78e-07!216;UBERON:0005256!6.72e-07!143;UBERON:0000490!7.28e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-16;2!UBERON:0002173;1.48e-16;2!UBERON:0002186;1.48e-16;2!UBERON:0007196;1.12e-12;15!UBERON:0001558;1.12e-12;15!UBERON:0004821;2.38e-11;3!UBERON:0007499;2.38e-11;3!UBERON:0003215;2.38e-11;3!UBERON:0010368;2.38e-11;3!UBERON:0009911;2.38e-11;3!UBERON:0002299;2.38e-11;3!UBERON:0006524;2.38e-11;3!UBERON:0008874;2.38e-11;3!UBERON:0002169;2.38e-11;3!UBERON:0004894;2.38e-11;3!UBERON:0009856;9.93e-09;4!UBERON:0001264;1.68e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.00e-16,2;UBERON:0002173,1.00e-16,2;UBERON:0002186,1.00e-16,2;UBERON:0007196,9.09e-13,15;UBERON:0001558,9.09e-13,15;UBERON:0004821,1.84e-11,3;UBERON:0003215,1.84e-11,3;UBERON:0010368,1.84e-11,3;UBERON:0009911,1.84e-11,3;UBERON:0002299,1.84e-11,3;UBERON:0006524,1.84e-11,3;UBERON:0008874,1.84e-11,3;UBERON:0002169,1.84e-11,3;UBERON:0004894,1.84e-11,3;UBERON:0001264,1.75e-07,10;UBERON:0005177,2.14e-07,101 | |||
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| ||
|short_description=p@chr2:227517160..227517177,- | |short_description=p@chr2:227517160..227517177,- | ||
}} | }} |
Latest revision as of 07:18, 29 July 2015
Short description: | p@chr2:227517160..227517177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:227517160..227517177, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.34e-21 | 9 |
epithelial cell of lower respiratory tract | 2.34e-21 | 9 |
respiratory epithelial cell | 3.89e-21 | 13 |
hepatic stem cell | 1.60e-16 | 2 |
hepatic mesenchymal stem cell | 1.60e-16 | 2 |
endo-epithelial cell | 1.52e-13 | 42 |
pneumocyte | 1.84e-11 | 3 |
duct epithelial cell | 3.42e-11 | 3 |
branched duct epithelial cell | 3.42e-11 | 3 |
tracheal epithelial cell | 3.42e-11 | 3 |
tracheoblast | 3.42e-11 | 3 |
endodermal cell | 1.95e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.00e-16 | 2 |
alveolar duct | 1.00e-16 | 2 |
bronchiole | 1.00e-16 | 2 |
tracheobronchial tree | 9.09e-13 | 15 |
lower respiratory tract | 9.09e-13 | 15 |
pulmonary alveolus epithelium | 1.84e-11 | 3 |
alveolus | 1.84e-11 | 3 |
pulmonary lobule | 1.84e-11 | 3 |
lobule | 1.84e-11 | 3 |
alveolus of lung | 1.84e-11 | 3 |
alveolar system | 1.84e-11 | 3 |
pulmonary acinus | 1.84e-11 | 3 |
alveolar sac | 1.84e-11 | 3 |
alveolar wall | 1.84e-11 | 3 |
pancreas | 1.75e-07 | 10 |
trunk region element | 2.14e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.00e-16 | 2 |
osteosarcoma | 6.22e-09 | 1 |
non-small cell lung carcinoma | 3.25e-07 | 5 |