FFCP PHASE1:Hg19::chr2:239050817..239050828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:239050817..239050828,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr2:239050817..239050828,+ | |description=CAGE_peak_at_chr2:239050817..239050828,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000515!4.62e-09!4;CL:1000507!5.45e-08!12;CL:1000494!5.45e-08!12;CL:0002368!5.04e-07!13;CL:0002076!6.67e-07!43 | |ontology_enrichment_celltype=CL:0000515!4.62e-09!4;CL:1000507!5.45e-08!12;CL:1000494!5.45e-08!12;CL:0002368!5.04e-07!13;CL:0002076!6.67e-07!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.43e-12;31 | |ontology_enrichment_development_v019=UBERON:0003104;4.43e-12;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!5.45e-08!12;UBERON:0001231!5.45e-08!12;UBERON:0004810!5.45e-08!12 | |ontology_enrichment_uberon=UBERON:0009773!5.45e-08!12;UBERON:0001231!5.45e-08!12;UBERON:0004810!5.45e-08!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0001134;4.67e-23;16!UBERON:0002036;4.67e-23;16!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0002385;1.01e-12;31!UBERON:0001015;1.01e-12;31!UBERON:0000383;1.01e-12;31!UBERON:0003343;3.60e-11;4!UBERON:0004785;3.60e-11;4!UBERON:0000974;7.01e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0001134;4.67e-23;16!UBERON:0002036;4.67e-23;16!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0002385;1.01e-12;31!UBERON:0001015;1.01e-12;31!UBERON:0000383;1.01e-12;31!UBERON:0003343;3.60e-11;4!UBERON:0004785;3.60e-11;4!UBERON:0000974;7.01e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.62e-41,1;UBERON:0001389,6.62e-41,1;UBERON:0000026,6.62e-41,1;UBERON:0008784,6.62e-41,1;UBERON:0006058,6.62e-41,1;UBERON:0003663,6.62e-41,1;UBERON:0004256,6.62e-41,1;UBERON:0004708,6.62e-41,1;UBERON:0002101,6.62e-41,1;UBERON:0004709,6.62e-41,1;UBERON:0002529,6.62e-41,1;UBERON:0010538,6.62e-41,1;UBERON:0003661,6.62e-41,1;UBERON:0010890,6.62e-41,1;UBERON:0002471,6.62e-41,1;UBERON:0001383,6.62e-41,1;UBERON:0004357,6.62e-41,1;UBERON:0004347,6.62e-41,1;UBERON:0005420,6.62e-41,1;UBERON:0005732,6.62e-41,1;UBERON:0010758,6.62e-41,1;UBERON:0010707,6.62e-41,1;UBERON:0000978,6.62e-41,1;UBERON:0002103,6.62e-41,1;UBERON:0001665,6.62e-41,1;UBERON:0003823,6.62e-41,1;UBERON:0000154,6.62e-41,1;UBERON:0010709,6.62e-41,1;UBERON:0005733,6.62e-41,1;UBERON:0005730,6.62e-41,1;UBERON:0005090,3.11e-21,2;UBERON:0001630,3.11e-21,2;UBERON:0003343,3.79e-11,4;UBERON:0004785,3.79e-11,4 | |||
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| ||
|short_description=p@chr2:239050817..239050828,+ | |short_description=p@chr2:239050817..239050828,+ | ||
}} | }} |
Latest revision as of 08:18, 29 July 2015
Short description: | p@chr2:239050817..239050828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:239050817..239050828, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.62e-41 | 1 |
soleus muscle | 6.62e-41 | 1 |
appendage | 6.62e-41 | 1 |
lower limb segment | 6.62e-41 | 1 |
multi-limb segment region | 6.62e-41 | 1 |
hindlimb muscle | 6.62e-41 | 1 |
hindlimb zeugopod muscle | 6.62e-41 | 1 |
paired limb/fin | 6.62e-41 | 1 |
limb | 6.62e-41 | 1 |
pelvic appendage | 6.62e-41 | 1 |
limb segment | 6.62e-41 | 1 |
paired limb/fin segment | 6.62e-41 | 1 |
limb muscle | 6.62e-41 | 1 |
pelvic complex muscle | 6.62e-41 | 1 |
zeugopod | 6.62e-41 | 1 |
muscle of leg | 6.62e-41 | 1 |
paired limb/fin bud | 6.62e-41 | 1 |
limb bud | 6.62e-41 | 1 |
pelvic appendage bud | 6.62e-41 | 1 |
limb/fin field | 6.62e-41 | 1 |
subdivision of organism along appendicular axis | 6.62e-41 | 1 |
appendage girdle complex | 6.62e-41 | 1 |
leg | 6.62e-41 | 1 |
hindlimb | 6.62e-41 | 1 |
triceps surae | 6.62e-41 | 1 |
hindlimb zeugopod | 6.62e-41 | 1 |
posterior region of body | 6.62e-41 | 1 |
pelvic complex | 6.62e-41 | 1 |
limb field | 6.62e-41 | 1 |
hindlimb/pelvic fin field | 6.62e-41 | 1 |
muscle structure | 3.11e-21 | 2 |
muscle organ | 3.11e-21 | 2 |
mucosa of oral region | 3.79e-11 | 4 |
respiratory system mucosa | 3.79e-11 | 4 |