FFCP PHASE1:Hg19::chr2:25326312..25326322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:25326312..25326322,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr2:25326312..25326322,+ | |description=CAGE_peak_at_chr2:25326312..25326322,+ | ||
|id=chr2:25326312..25326322,+ | |id=chr2:25326312..25326322,+ | ||
|ontology_enrichment_celltype=CL:0000077!2.06e-12!19;CL:0000569!6.64e-08!4;CL:0000011!6.64e-08!4;CL:0000174!1.35e-07!3;CL:0002621!9.69e-07!3 | |ontology_enrichment_celltype=CL:0000077!2.06e-12!19;CL:0000569!6.64e-08!4;CL:0000011!6.64e-08!4;CL:0000174!1.35e-07!3;CL:0002621!9.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.72e-44;19!CL:0002097;4.08e-27;2!CL:0000174;1.94e-18;3!CL:0000511;1.84e-14;1!CL:0002625;1.84e-14;1!CL:0000228;1.84e-14;1!CL:0000216;1.84e-14;1!CL:0002372;1.84e-14;1!CL:0000213;6.35e-09;58!CL:0000215;6.35e-09;58!CL:0000076;4.37e-08;63!CL:0000150;9.37e-07;9!CL:0000163;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.57e-44,19;CL:0002097,3.58e-27,2;CL:0000174,1.77e-18,3;CL:0000511,1.23e-14,1;CL:0002625,1.23e-14,1;CL:0000216,1.23e-14,1;CL:0000228,1.61e-14,1;CL:0002372,1.61e-14,1;CL:0000213,5.37e-14,58;CL:0000215,5.37e-14,58;CL:0000076,7.95e-13,63;CL:0000222,5.77e-08,121;CL:0000150,9.10e-07,9;CL:0000163,9.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.94e-18;3!UBERON:0003353;1.94e-18;3 | |||
|ontology_enrichment_disease=DOID:2394!2.54e-13!14;DOID:193!4.23e-09!29;DOID:120!2.14e-08!27 | |ontology_enrichment_disease=DOID:2394!2.54e-13!14;DOID:193!4.23e-09!29;DOID:120!2.14e-08!27 | ||
|ontology_enrichment_disease_v019=DOID:6193;8.74e-15;1!DOID:170;1.06e-09;6!DOID:3350;4.85e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.17e-15,1;DOID:170,1.01e-09,6;DOID:3350,4.69e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002119!2.07e-08!4;UBERON:0004531!2.07e-08!4;UBERON:0000992!5.34e-07!13;UBERON:0001949!9.69e-07!3 | |ontology_enrichment_uberon=UBERON:0002119!2.07e-08!4;UBERON:0004531!2.07e-08!4;UBERON:0000992!5.34e-07!13;UBERON:0001949!9.69e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.94e-18;3!UBERON:0001235;1.94e-18;3!UBERON:0006858;1.94e-18;3!UBERON:0001136;1.84e-14;1!UBERON:0001343;1.84e-14;1!UBERON:0004910;1.84e-14;1!UBERON:0004813;1.84e-14;1!UBERON:0001905;7.03e-08;2!UBERON:0002757;7.03e-08;2!UBERON:0010134;7.03e-08;2!UBERON:0004909;7.03e-08;2!UBERON:0005408;7.03e-08;2!UBERON:0001899;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.77e-18,3;UBERON:0001235,1.77e-18,3;UBERON:0006858,1.77e-18,3;UBERON:0001136,1.23e-14,1;UBERON:0001343,1.23e-14,1;UBERON:0004910,1.23e-14,1;UBERON:0005154,1.23e-14,1;UBERON:0005295,1.23e-14,1;UBERON:0004813,1.23e-14,1;UBERON:0005297,1.23e-14,1;UBERON:0005294,1.23e-14,1;UBERON:0010141,1.23e-14,1;UBERON:0005891,1.23e-14,1;UBERON:0003064,1.11e-11,28;UBERON:0004122,1.92e-08,15;UBERON:0001905,5.37e-08,2;UBERON:0002757,5.37e-08,2;UBERON:0010134,5.37e-08,2;UBERON:0005408,5.37e-08,2;UBERON:0001899,5.37e-08,2;UBERON:0004909,5.74e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,8.13886318060882,4.35766729300147,4.59875759437462,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,2.57979048707425,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.951329442515298,0.732219924186332,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,2.28483127301277,0.813741466409323,0,0.537052785212442,0.464033759878494,0,0,0,0,0,1.54095864325843,1.28664954824955,0,0,0,0,0,3.70561736593167,0.657852148736121,1.41351316756705,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0.982631505060581,0,0.0675375846183947,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0.0679697329768317,0,1.06374456795571,1.22354542081276,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0.766920642832419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,8.13886318060882,4.35766729300147,4.59875759437462,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,2.57979048707425,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.951329442515298,0.732219924186332,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,2.28483127301277,0.813741466409323,0,0.537052785212442,0.464033759878494,0,0,0,0,0,1.54095864325843,1.28664954824955,0,0,0,0,0,3.70561736593167,0.657852148736121,1.41351316756705,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0.982631505060581,0,0.0675375846183947,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0.0679697329768317,0,1.06374456795571,1.22354542081276,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0.766920642832419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr2:25326312..25326322,+ | |short_description=p@chr2:25326312..25326322,+ | ||
}} | }} |
Latest revision as of 08:53, 29 July 2015
Short description: | p@chr2:25326312..25326322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:25326312..25326322, + |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.57e-44 | 19 |
cortical cell of adrenal gland | 3.58e-27 | 2 |
steroid hormone secreting cell | 1.77e-18 | 3 |
androgen binding protein secreting cell | 1.23e-14 | 1 |
seminiferous tubule epithelial cell | 1.23e-14 | 1 |
Sertoli cell | 1.23e-14 | 1 |
multinucleate cell | 1.61e-14 | 1 |
myotube | 1.61e-14 | 1 |
lining cell | 5.37e-14 | 58 |
barrier cell | 5.37e-14 | 58 |
squamous epithelial cell | 7.95e-13 | 63 |
mesodermal cell | 5.77e-08 | 121 |
glandular epithelial cell | 9.10e-07 | 9 |
endocrine cell | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.77e-18 | 3 |
adrenal cortex | 1.77e-18 | 3 |
adrenal/interrenal gland | 1.77e-18 | 3 |
mesothelium | 1.23e-14 | 1 |
seminiferous tubule of testis | 1.23e-14 | 1 |
epithelium of male gonad | 1.23e-14 | 1 |
epithelial cord | 1.23e-14 | 1 |
sex cord | 1.23e-14 | 1 |
seminiferous tubule epithelium | 1.23e-14 | 1 |
testis sex cord | 1.23e-14 | 1 |
genital ridge | 1.23e-14 | 1 |
primitive sex cord of indifferent gonad | 1.23e-14 | 1 |
coelomic epithelium | 1.23e-14 | 1 |
intermediate mesoderm | 1.11e-11 | 28 |
genitourinary system | 1.92e-08 | 15 |
pineal body | 5.37e-08 | 2 |
regional part of epithalamus | 5.37e-08 | 2 |
secretory circumventricular organ | 5.37e-08 | 2 |
circumventricular organ | 5.37e-08 | 2 |
epithalamus | 5.37e-08 | 2 |
epithelium of gonad | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.17e-15 | 1 |
endocrine gland cancer | 1.01e-09 | 6 |
mesenchymal cell neoplasm | 4.69e-08 | 2 |