FFCP PHASE1:Hg19::chr2:56412876..56412892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000432793,uc010fca.1_5end | |association_with_transcript=12bp_to_ENST00000432793,uc010fca.1_5end | ||
|cluster_id=chr2:56412876..56412892,- | |||
|coexpression_cluster_id=C1237 | |coexpression_cluster_id=C1237 | ||
|description=CAGE_peak_3_at_ENST00000432793_5end,CAGE_peak_3_at_uc010fca.1_5end | |description=CAGE_peak_3_at_ENST00000432793_5end,CAGE_peak_3_at_uc010fca.1_5end | ||
|id=chr2:56412876..56412892,- | |id=chr2:56412876..56412892,- | ||
|ontology_enrichment_celltype=CL:0002139!4.02e-20!24;CL:0000115!3.59e-17!35;CL:0000071!2.98e-14!18;CL:0002546!2.98e-14!18;CL:0002078!8.57e-12!44;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:1000413!1.65e-09!9;CL:0005020!1.52e-07!6;CL:0002138!1.52e-07!6;CL:0005022!1.52e-07!6;CL:0000222!7.81e-07!119 | |ontology_enrichment_celltype=CL:0002139!4.02e-20!24;CL:0000115!3.59e-17!35;CL:0000071!2.98e-14!18;CL:0002546!2.98e-14!18;CL:0002078!8.57e-12!44;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:1000413!1.65e-09!9;CL:0005020!1.52e-07!6;CL:0002138!1.52e-07!6;CL:0005022!1.52e-07!6;CL:0000222!7.81e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.93e-50;24!CL:0000071;2.22e-41;18!CL:0000115;7.18e-37;36!CL:1000413;1.71e-34;9!CL:0002078;2.79e-23;45!CL:0000213;1.34e-18;58!CL:0000215;1.34e-18;58!CL:0002544;1.15e-17;6!CL:0002543;1.90e-17;6!CL:0002138;1.27e-10;6!CL:0002618;1.16e-09;3!CL:1000306;5.21e-07;4!CL:0002547;5.21e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.36e-50,24;CL:0000115,1.24e-42,36;CL:0000071,2.55e-41,18;CL:0002546,2.55e-41,18;CL:1000413,1.63e-34,9;CL:0002078,1.90e-33,45;CL:0000213,3.30e-25,58;CL:0000215,3.30e-25,58;CL:0002544,9.89e-18,6;CL:0002543,2.31e-17,6;CL:0000222,1.75e-13,121;CL:0005020,1.27e-10,6;CL:0002138,1.27e-10,6;CL:0005022,1.27e-10,6;CL:0000076,2.39e-10,63;CL:0002618,1.40e-09,3;CL:1000306,4.47e-07,4;CL:0002547,4.47e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.22e-41;18!CL:0005022;1.27e-10;6!UBERON:0003124;9.74e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.22e-41;18!UBERON:0001986;2.22e-41;18!UBERON:0004852;2.22e-41;18!UBERON:0003915;1.71e-34;9!UBERON:0004700;1.71e-34;9!UBERON:0001917;1.71e-34;9!UBERON:0000487;1.72e-33;22!UBERON:0006914;3.14e-29;25!UBERON:0000490;2.96e-20;33!UBERON:0007500;6.86e-17;56!UBERON:0001981;6.86e-17;56!UBERON:0004537;6.86e-17;56!UBERON:0000055;1.44e-16;65!UBERON:0001637;6.58e-16;42!UBERON:0003509;6.58e-16;42!UBERON:0004572;6.58e-16;42!UBERON:0000947;5.99e-14;21!UBERON:0010191;5.99e-14;21!UBERON:0001638;1.10e-11;9!UBERON:0003920;1.10e-11;9!UBERON:0004582;1.10e-11;9!UBERON:0004573;3.66e-11;33!UBERON:0004571;3.66e-11;33!UBERON:0002049;3.83e-11;75!UBERON:0007798;3.83e-11;75!UBERON:0003914;3.63e-08;74!UBERON:0001473;4.48e-08;8!UBERON:0004536;4.48e-08;8!UBERON:0006558;4.48e-08;8!UBERON:0001009;1.19e-07;112!UBERON:0000996;2.04e-07;1!UBERON:0004797;5.21e-07;4!UBERON:0000415;5.21e-07;4!UBERON:0007240;5.21e-07;4!UBERON:0005742;5.21e-07;4!UBERON:0005734;5.21e-07;4!UBERON:0004664;5.21e-07;4!UBERON:0004663;5.21e-07;4 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0.522389211897802,0,0,0,0,3.57772333260069,0,4.85996702250632,2.82653970962005,3.35599548967925,2.20094433552054,2.50793959844173,6.97725249757188,4.62496141492723,5.69025041699939,0.402829317109147,0,0.976248230192678,3.67663080345869,0.81014194788176,2.05389375053383,4.04152870727106,0.450445921933289,0,2.84779697870439,2.19842092716489,0,0,0,0,1.13967460498122,0.264818361626438,1.43418310374407,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,0.257640540045629,0,0.168776332241266,0.292311015483596,0.252433774244115,0.0920498986422993,0.646584227275248,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.788512075169673,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.841980283299221,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0.261435451024901,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.331737779793674,0,0.87754158861589,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.316553979779393,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0.798716001995964,1.28767814440971,0.669514372325618,0.806201669840715,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,1.19271615249795,0,0,0,0.387848869084652,0.26446520348538,0,0,0.533937062838473,0.943225830597996,0.414239055347196,0,0,0,0,1.08803560673895,1.2534494701135,0.919036730290385,0.327872630709804,0,0,0,0.625954653532499,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0.537052785212442,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0.358177682162975,0,0,0,0,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.319267718114302,0,0,0.414943514785307,0.968853873791107,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0.620060389503552,0.19024743058172,0,0.548257766857182,0,0,0,0,0,0,0.455324382702595,2.83847584520444,0,0,0.271878931907327,0.526182188502793,0,0,0.627944742804112,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,0.509781344063451,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0,0.186224142887574,0,0.190941474834495,0.404234377916439,1.08858373948481,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0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,1.33151354837103,0.201273793591026,0 | ||
|short_description=p3@ENST00000432793,p3@uc010fca.1 | |short_description=p3@ENST00000432793,p3@uc010fca.1 | ||
}} | }} |
Latest revision as of 11:03, 29 July 2015
Short description: | p3@ENST00000432793, p3@uc010fca.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000432793_5end, CAGE_peak_3_at_uc010fca.1_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | 12bp_to_ENST00000432793, uc010fca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.36e-50 | 24 |
endothelial cell | 1.24e-42 | 36 |
blood vessel endothelial cell | 2.55e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.55e-41 | 18 |
endothelial cell of artery | 1.63e-34 | 9 |
meso-epithelial cell | 1.90e-33 | 45 |
lining cell | 3.30e-25 | 58 |
barrier cell | 3.30e-25 | 58 |
aortic endothelial cell | 9.89e-18 | 6 |
vein endothelial cell | 2.31e-17 | 6 |
mesodermal cell | 1.75e-13 | 121 |
lymphangioblast | 1.27e-10 | 6 |
endothelial cell of lymphatic vessel | 1.27e-10 | 6 |
vascular lymphangioblast | 1.27e-10 | 6 |
squamous epithelial cell | 2.39e-10 | 63 |
endothelial cell of umbilical vein | 1.40e-09 | 3 |
fibroblast of tunica adventitia of artery | 4.47e-07 | 4 |
fibroblast of the aortic adventitia | 4.47e-07 | 4 |