FFCP PHASE1:Hg19::chr2:97626140..97626165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:97626140..97626165,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:97626140..97626165,- | |description=CAGE_peak_at_chr2:97626140..97626165,- | ||
|id=chr2:97626140..97626165,- | |id=chr2:97626140..97626165,- | ||
|ontology_enrichment_celltype=CL:0000148!6.74e-28!10;CL:0000541!6.74e-28!10;CL:0000147!8.26e-20!14;CL:0000710!9.96e-14!20;CL:0002567!1.34e-11!3;CL:0000075!4.87e-10!27;CL:0002566!3.88e-09!1;CL:0002077!4.05e-08!33;CL:0000325!8.69e-07!39 | |ontology_enrichment_celltype=CL:0000148!6.74e-28!10;CL:0000541!6.74e-28!10;CL:0000147!8.26e-20!14;CL:0000710!9.96e-14!20;CL:0002567!1.34e-11!3;CL:0000075!4.87e-10!27;CL:0002566!3.88e-09!1;CL:0002077!4.05e-08!33;CL:0000325!8.69e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.19e-23;10!CL:0000147;1.44e-16;14!CL:0000710;8.12e-12;20!CL:0002567;1.24e-09;3!CL:0000075;6.31e-09;27!CL:0000149;1.92e-07;4!CL:0002077;2.59e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.46e-23,10;CL:0000541,7.46e-23,10;CL:0000147,1.48e-16,14;CL:0000710,8.27e-12,20;CL:0002567,1.19e-09,3;CL:0000075,6.40e-09,27;CL:0000149,2.04e-07,4;CL:0002077,3.29e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.43e-74;3 | |||
|ontology_enrichment_disease=DOID:1325!1.30e-10!7;DOID:3904!1.30e-10!7;DOID:0050619!2.60e-09!1;DOID:1357!2.60e-09!1;DOID:0050615!5.00e-08!16 | |ontology_enrichment_disease=DOID:1325!1.30e-10!7;DOID:3904!1.30e-10!7;DOID:0050619!2.60e-09!1;DOID:1357!2.60e-09!1;DOID:0050615!5.00e-08!16 | ||
|ontology_enrichment_disease_v019=DOID:0050619;9.79e-26;1!DOID:1357;9.79e-26;1!DOID:5409;1.31e-07;4!DOID:0050615;3.55e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.79e-26,1;DOID:1357,9.79e-26,1;DOID:5409,1.31e-07,4;DOID:0050615,3.55e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0009663!2.10e-17!7;UBERON:0001049!8.86e-17!57;UBERON:0005068!8.86e-17!57;UBERON:0006241!8.86e-17!57;UBERON:0007135!8.86e-17!57;UBERON:0001875!2.99e-16!2;UBERON:0006514!2.99e-16!2;UBERON:0002616!3.77e-16!59;UBERON:0004733!4.47e-16!12;UBERON:0002028!4.47e-16!12;UBERON:0007277!4.47e-16!12;UBERON:0004732!7.88e-15!13;UBERON:0002680!3.01e-14!9;UBERON:0001895!3.01e-14!9;UBERON:0010092!3.01e-14!9;UBERON:0002308!1.37e-13!9;UBERON:0002420!1.37e-13!9;UBERON:0000125!1.37e-13!9;UBERON:0007245!1.37e-13!9;UBERON:0010009!1.37e-13!9;UBERON:0010011!1.37e-13!9;UBERON:0000454!1.37e-13!9;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0003076!7.82e-13!15;UBERON:0003057!7.82e-13!15;UBERON:0002037!1.15e-12!6;UBERON:0006215!1.15e-12!6;UBERON:0001017!6.10e-11!82;UBERON:0003075!1.72e-10!86;UBERON:0007284!1.72e-10!86;UBERON:0005743!2.38e-10!86;UBERON:0002791!4.38e-10!33;UBERON:0002346!6.12e-10!90;UBERON:0001893!8.94e-10!34;UBERON:0000033!2.12e-09!123;UBERON:0001764!2.60e-09!1;UBERON:0001825!2.60e-09!1;UBERON:0000073!3.39e-09!94;UBERON:0001016!3.39e-09!94;UBERON:0002298!6.40e-09!8;UBERON:0002336!6.72e-09!1;UBERON:0001018!6.72e-09!1;UBERON:0002473!6.72e-09!1;UBERON:0005340!6.72e-09!1;UBERON:0002316!6.72e-09!1;UBERON:0003544!6.72e-09!1;UBERON:0001020!6.72e-09!1;UBERON:0005970!6.72e-09!1;UBERON:0002437!6.72e-09!1;UBERON:0003112!7.27e-09!1;UBERON:0000032!7.27e-09!1;UBERON:0005253!7.27e-09!1;UBERON:0003128!7.27e-09!1;UBERON:0002241!7.27e-09!1;UBERON:0001703!7.27e-09!1;UBERON:0004761!7.27e-09!1;UBERON:0009617!7.27e-09!1;UBERON:0000153!7.45e-09!129;UBERON:0007811!7.45e-09!129;UBERON:0007023!7.70e-09!115;UBERON:0002038!7.85e-09!1;UBERON:0009661!7.85e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0002780!5.12e-08!41;UBERON:0001890!5.12e-08!41;UBERON:0006240!5.12e-08!41;UBERON:0003080!8.19e-08!42;UBERON:0002020!2.78e-07!34;UBERON:0003528!2.78e-07!34 | |ontology_enrichment_uberon=UBERON:0009663!2.10e-17!7;UBERON:0001049!8.86e-17!57;UBERON:0005068!8.86e-17!57;UBERON:0006241!8.86e-17!57;UBERON:0007135!8.86e-17!57;UBERON:0001875!2.99e-16!2;UBERON:0006514!2.99e-16!2;UBERON:0002616!3.77e-16!59;UBERON:0004733!4.47e-16!12;UBERON:0002028!4.47e-16!12;UBERON:0007277!4.47e-16!12;UBERON:0004732!7.88e-15!13;UBERON:0002680!3.01e-14!9;UBERON:0001895!3.01e-14!9;UBERON:0010092!3.01e-14!9;UBERON:0002308!1.37e-13!9;UBERON:0002420!1.37e-13!9;UBERON:0000125!1.37e-13!9;UBERON:0007245!1.37e-13!9;UBERON:0010009!1.37e-13!9;UBERON:0010011!1.37e-13!9;UBERON:0000454!1.37e-13!9;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0003076!7.82e-13!15;UBERON:0003057!7.82e-13!15;UBERON:0002037!1.15e-12!6;UBERON:0006215!1.15e-12!6;UBERON:0001017!6.10e-11!82;UBERON:0003075!1.72e-10!86;UBERON:0007284!1.72e-10!86;UBERON:0005743!2.38e-10!86;UBERON:0002791!4.38e-10!33;UBERON:0002346!6.12e-10!90;UBERON:0001893!8.94e-10!34;UBERON:0000033!2.12e-09!123;UBERON:0001764!2.60e-09!1;UBERON:0001825!2.60e-09!1;UBERON:0000073!3.39e-09!94;UBERON:0001016!3.39e-09!94;UBERON:0002298!6.40e-09!8;UBERON:0002336!6.72e-09!1;UBERON:0001018!6.72e-09!1;UBERON:0002473!6.72e-09!1;UBERON:0005340!6.72e-09!1;UBERON:0002316!6.72e-09!1;UBERON:0003544!6.72e-09!1;UBERON:0001020!6.72e-09!1;UBERON:0005970!6.72e-09!1;UBERON:0002437!6.72e-09!1;UBERON:0003112!7.27e-09!1;UBERON:0000032!7.27e-09!1;UBERON:0005253!7.27e-09!1;UBERON:0003128!7.27e-09!1;UBERON:0002241!7.27e-09!1;UBERON:0001703!7.27e-09!1;UBERON:0004761!7.27e-09!1;UBERON:0009617!7.27e-09!1;UBERON:0000153!7.45e-09!129;UBERON:0007811!7.45e-09!129;UBERON:0007023!7.70e-09!115;UBERON:0002038!7.85e-09!1;UBERON:0009661!7.85e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0002780!5.12e-08!41;UBERON:0001890!5.12e-08!41;UBERON:0006240!5.12e-08!41;UBERON:0003080!8.19e-08!42;UBERON:0002020!2.78e-07!34;UBERON:0003528!2.78e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.11e-37;6!UBERON:0001764;9.79e-26;1!UBERON:0001825;9.79e-26;1!UBERON:0002680;2.01e-25;9!UBERON:0001895;2.01e-25;9!UBERON:0004733;2.81e-19;12!UBERON:0002028;2.81e-19;12!UBERON:0004732;7.43e-18;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.04e-37,6;UBERON:0006215,1.04e-37,6;UBERON:0001764,9.79e-26,1;UBERON:0001825,9.79e-26,1;UBERON:0002680,1.92e-25,9;UBERON:0001895,1.92e-25,9;UBERON:0010092,1.92e-25,9;UBERON:0004733,2.73e-19,12;UBERON:0002028,2.73e-19,12;UBERON:0007277,2.73e-19,12;UBERON:0004732,7.22e-18,13;UBERON:0003076,1.37e-15,15;UBERON:0003057,1.37e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0.763976851116555,3.51652341630141,0,0.308482478109971,1.20137223137567,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0.236387681767936,0,0,0,0,0,3.05163472634166,5.08664595683633,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.0159425184931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0.763976851116555,3.51652341630141,0,0.308482478109971,1.20137223137567,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0.236387681767936,0,0,0,0,0,3.05163472634166,5.08664595683633,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.0159425184931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:97626140..97626165,- | |short_description=p@chr2:97626140..97626165,- | ||
}} | }} |
Latest revision as of 13:25, 29 July 2015
Short description: | p@chr2:97626140..97626165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:97626140..97626165, - |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.46e-23 | 10 |
melanoblast | 7.46e-23 | 10 |
pigment cell | 1.48e-16 | 14 |
neurecto-epithelial cell | 8.27e-12 | 20 |
light melanocyte | 1.19e-09 | 3 |
columnar/cuboidal epithelial cell | 6.40e-09 | 27 |
visual pigment cell | 2.04e-07 | 4 |
ecto-epithelial cell | 3.29e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.04e-37 | 6 |
rhombic lip | 1.04e-37 | 6 |
maxillary sinus | 9.79e-26 | 1 |
paranasal sinus | 9.79e-26 | 1 |
regional part of metencephalon | 1.92e-25 | 9 |
metencephalon | 1.92e-25 | 9 |
future metencephalon | 1.92e-25 | 9 |
segmental subdivision of hindbrain | 2.73e-19 | 12 |
hindbrain | 2.73e-19 | 12 |
presumptive hindbrain | 2.73e-19 | 12 |
segmental subdivision of nervous system | 7.22e-18 | 13 |
posterior neural tube | 1.37e-15 | 15 |
chordal neural plate | 1.37e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.79e-26 | 1 |
maxillary sinus cancer | 9.79e-26 | 1 |
lung small cell carcinoma | 1.31e-07 | 4 |
respiratory system cancer | 3.55e-07 | 16 |