FFCP PHASE1:Hg19::chr3:101682961..101682974,+: Difference between revisions
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|id=chr3:101682961..101682974,+
|short_description=p@chr3:101682961..101682974,+
|description=CAGE_peak_at_chr3:101682961..101682974,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:101682961..101682974,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr3:101682961..101682974,+ | |||
|id=chr3:101682961..101682974,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.58e-61!42;CL:0000860!2.64e-56!45;CL:0002009!8.67e-41!65;CL:0002194!1.64e-39!63;CL:0000576!1.64e-39!63;CL:0000040!1.64e-39!63;CL:0000559!1.64e-39!63;CL:0000557!1.34e-36!71;CL:0000766!8.12e-36!76;CL:0000839!1.04e-34!70;CL:0002087!1.23e-25!119;CL:0000738!1.45e-24!140;CL:0000763!5.64e-23!112;CL:0000049!5.64e-23!112;CL:0002031!3.86e-21!124;CL:0000037!5.25e-18!172;CL:0000566!5.25e-18!172;CL:0000988!1.94e-16!182;CL:0002032!1.18e-15!165;CL:0000837!1.18e-15!165;CL:0002393!1.23e-15!9;CL:0002397!1.23e-15!9;CL:0000842!1.31e-09!3;CL:0000224!2.73e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.44e-41;6!CL:0002397;1.44e-41;6!CL:0000860;4.25e-36;33!CL:0002057;4.25e-36;33!CL:0000576;9.57e-36;48!CL:0000473;3.68e-26;39!CL:0000234;3.68e-26;39!CL:0000766;1.02e-20;69!CL:0002087;1.79e-14;104!CL:0000226;4.72e-14;3!CL:0000842;4.72e-14;3!CL:0002581;3.63e-11;1!CL:0000763;2.05e-09;100!CL:0000738;1.13e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.00e-66,42;CL:0002057,5.00e-66,42;CL:0000473,1.70e-57,48;CL:0000234,1.70e-57,48;CL:0002194,1.51e-45,59;CL:0000576,1.51e-45,59;CL:0000040,1.51e-45,59;CL:0000559,1.51e-45,59;CL:0002009,5.29e-44,61;CL:0000839,1.51e-40,66;CL:0000557,6.44e-40,67;CL:0000766,5.03e-37,72;CL:0002087,1.92e-28,115;CL:0002393,1.44e-27,9;CL:0002397,1.44e-27,9;CL:0000763,5.22e-24,108;CL:0000049,5.22e-24,108;CL:0000738,1.07e-23,136;CL:0002031,2.20e-21,120;CL:0000037,1.02e-18,168;CL:0000988,1.22e-17,177;CL:0002032,2.44e-15,161;CL:0000837,2.44e-15,161;CL:0000226,4.14e-14,3;CL:0000842,4.14e-14,3;CL:0002581,2.68e-11,1;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-44;42!CL:0000049;6.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-31!80;UBERON:0001474!1.14e-28!86;UBERON:0002390!4.27e-28!102;UBERON:0003061!4.27e-28!102;UBERON:0004765!2.61e-26!101;UBERON:0001434!2.61e-26!101;UBERON:0002193!2.62e-26!112;UBERON:0002405!1.40e-20!115;UBERON:0002204!1.22e-18!167;UBERON:0003081!5.64e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.58e-35,76;UBERON:0002390,9.40e-34,98;UBERON:0003061,9.40e-34,98;UBERON:0001474,2.79e-32,82;UBERON:0002193,1.98e-30,108;UBERON:0004765,3.11e-29,90;UBERON:0002405,3.17e-28,93;UBERON:0001434,4.21e-26,100;UBERON:0003081,4.70e-15,203;UBERON:0002204,1.06e-14,167;UBERON:0000926,9.78e-09,315;UBERON:0004120,9.78e-09,315;UBERON:0006603,9.78e-09,315;UBERON:0002384,4.95e-08,371 | |||
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| ||
|short_description=p@chr3:101682961..101682974,+ | |||
}} | }} |
Latest revision as of 13:49, 29 July 2015
Short description: | p@chr3:101682961..101682974, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:101682961..101682974, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.00e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.00e-66 | 42 |
defensive cell | 1.70e-57 | 48 |
phagocyte | 1.70e-57 | 48 |
monopoietic cell | 1.51e-45 | 59 |
monocyte | 1.51e-45 | 59 |
monoblast | 1.51e-45 | 59 |
promonocyte | 1.51e-45 | 59 |
macrophage dendritic cell progenitor | 5.29e-44 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-40 | 66 |
granulocyte monocyte progenitor cell | 6.44e-40 | 67 |
myeloid leukocyte | 5.03e-37 | 72 |
nongranular leukocyte | 1.92e-28 | 115 |
intermediate monocyte | 1.44e-27 | 9 |
CD14-positive, CD16-positive monocyte | 1.44e-27 | 9 |
myeloid cell | 5.22e-24 | 108 |
common myeloid progenitor | 5.22e-24 | 108 |
leukocyte | 1.07e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 2.20e-21 | 120 |
hematopoietic stem cell | 1.02e-18 | 168 |
hematopoietic cell | 1.22e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.44e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-15 | 161 |
single nucleate cell | 4.14e-14 | 3 |
mononuclear cell | 4.14e-14 | 3 |
perirenal preadipocyte | 2.68e-11 | 1 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.58e-35 | 76 |
hematopoietic system | 9.40e-34 | 98 |
blood island | 9.40e-34 | 98 |
bone element | 2.79e-32 | 82 |
hemolymphoid system | 1.98e-30 | 108 |
skeletal element | 3.11e-29 | 90 |
immune system | 3.17e-28 | 93 |
skeletal system | 4.21e-26 | 100 |
lateral plate mesoderm | 4.70e-15 | 203 |
musculoskeletal system | 1.06e-14 | 167 |
mesoderm | 9.78e-09 | 315 |
mesoderm-derived structure | 9.78e-09 | 315 |
presumptive mesoderm | 9.78e-09 | 315 |
connective tissue | 4.95e-08 | 371 |