FFCP PHASE1:Hg19::chr3:111499068..111499077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:111499068..111499077,+ | |||
|description=CAGE_peak_at_chr3:111499068..111499077,+ | |description=CAGE_peak_at_chr3:111499068..111499077,+ | ||
|id=chr3:111499068..111499077,+ | |id=chr3:111499068..111499077,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.22e-11!59;CL:0000066!1.20e-08!254;CL:0000181!1.49e-08!12;CL:0000417!1.49e-08!12;CL:0000668!1.49e-08!12;CL:0000414!1.49e-08!12;CL:0000412!1.49e-08!12;CL:0000182!1.49e-08!12 | |ontology_enrichment_celltype=CL:0000223!1.22e-11!59;CL:0000066!1.20e-08!254;CL:0000181!1.49e-08!12;CL:0000417!1.49e-08!12;CL:0000668!1.49e-08!12;CL:0000414!1.49e-08!12;CL:0000412!1.49e-08!12;CL:0000182!1.49e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.91e-17,12;CL:0000223,9.70e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2!UBERON:0004161;4.90e-09;11!UBERON:0009497;8.74e-08;13!CL:0000223;1.59e-07;58!UBERON:0001041;2.84e-07;30 | |||
|ontology_enrichment_disease=DOID:1749!6.39e-13!14;DOID:305!1.19e-11!106;DOID:0050687!3.15e-10!143;DOID:7!8.82e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.51e-15;14!DOID:4556;1.26e-08;3!DOID:7;3.38e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.69e-15,14;DOID:7,1.90e-09,39;DOID:4556,1.04e-08,3;DOID:305,1.82e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003929!2.05e-09!54;UBERON:0008835!3.47e-09!22;UBERON:0003894!3.47e-09!22;UBERON:0004119!6.95e-09!169;UBERON:0000925!6.95e-09!169;UBERON:0006595!6.95e-09!169;UBERON:0009854!1.04e-08!23;UBERON:0005911!1.23e-08!82;UBERON:0007499!7.15e-08!25;UBERON:0009497!7.15e-08!25;UBERON:0000015!7.15e-08!25;UBERON:0002423!7.15e-08!25;UBERON:0006235!7.15e-08!25;UBERON:0004161!7.15e-08!25;UBERON:0003343!8.64e-08!4;UBERON:0004785!8.64e-08!4;UBERON:0009856!1.67e-07!26;UBERON:0004921!3.26e-07!129;UBERON:0004185!3.26e-07!129;UBERON:0001007!4.14e-07!155;UBERON:0001555!4.14e-07!155;UBERON:0007026!4.14e-07!155;UBERON:0002107!8.23e-07!19;UBERON:0006925!8.23e-07!19;UBERON:0008836!8.23e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;8.02e-23;4!UBERON:0004785;8.02e-23;4!UBERON:0000974;1.41e-15;6!UBERON:0002107;3.42e-11;19!UBERON:0006925;3.42e-11;19!UBERON:0002423;1.17e-08;25!UBERON:0001723;1.26e-08;3!UBERON:0002114;1.26e-08;2!UBERON:0001033;1.26e-08;3!UBERON:0003729;1.05e-07;13!UBERON:0002365;2.60e-07;31!UBERON:0002330;2.60e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.42e-23,4;UBERON:0004785,6.42e-23,4;UBERON:0002107,3.67e-11,19;UBERON:0006925,3.67e-11,19;UBERON:0008836,3.67e-11,19;UBERON:0000974,8.84e-10,10;UBERON:0008835,9.98e-10,22;UBERON:0003894,9.98e-10,22;UBERON:0009854,2.48e-09,23;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0007499,1.24e-08,25;UBERON:0009497,1.24e-08,25;UBERON:0000015,1.24e-08,25;UBERON:0002423,1.24e-08,25;UBERON:0006235,1.24e-08,25;UBERON:0004161,1.24e-08,25;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160;UBERON:0002114,1.51e-08,2;UBERON:0009856,2.52e-08,26;UBERON:0003729,9.84e-08,13;UBERON:0001007,3.06e-07,145;UBERON:0001555,3.06e-07,145;UBERON:0007026,3.06e-07,145;UBERON:0002365,4.48e-07,31;UBERON:0002330,4.48e-07,31 | |||
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| ||
|short_description=p@chr3:111499068..111499077,+ | |short_description=p@chr3:111499068..111499077,+ | ||
}} | }} |
Latest revision as of 14:11, 29 July 2015
Short description: | p@chr3:111499068..111499077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:111499068..111499077, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.91e-17 | 12 |
endodermal cell | 9.70e-14 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.42e-23 | 4 |
respiratory system mucosa | 6.42e-23 | 4 |
liver | 3.67e-11 | 19 |
digestive gland | 3.67e-11 | 19 |
liver bud | 3.67e-11 | 19 |
neck | 8.84e-10 | 10 |
hepatic diverticulum | 9.98e-10 | 22 |
liver primordium | 9.98e-10 | 22 |
digestive tract diverticulum | 2.48e-09 | 23 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |
epithelial sac | 1.24e-08 | 25 |
epithelium of foregut-midgut junction | 1.24e-08 | 25 |
anatomical boundary | 1.24e-08 | 25 |
hepatobiliary system | 1.24e-08 | 25 |
foregut-midgut junction | 1.24e-08 | 25 |
septum transversum | 1.24e-08 | 25 |
endoderm-derived structure | 1.50e-08 | 160 |
endoderm | 1.50e-08 | 160 |
presumptive endoderm | 1.50e-08 | 160 |
duodenum | 1.51e-08 | 2 |
sac | 2.52e-08 | 26 |
mouth mucosa | 9.84e-08 | 13 |
digestive system | 3.06e-07 | 145 |
digestive tract | 3.06e-07 | 145 |
primitive gut | 3.06e-07 | 145 |
exocrine gland | 4.48e-07 | 31 |
exocrine system | 4.48e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.69e-15 | 14 |
disease of anatomical entity | 1.90e-09 | 39 |
lung large cell carcinoma | 1.04e-08 | 3 |
carcinoma | 1.82e-07 | 106 |