FFCP PHASE1:Hg19::chr3:124420828..124420842,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:124420828..124420842,+ | |||
|description=CAGE_peak_at_chr3:124420828..124420842,+ | |description=CAGE_peak_at_chr3:124420828..124420842,+ | ||
|id=chr3:124420828..124420842,+ | |id=chr3:124420828..124420842,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.81e-08!7;CL:0000126!1.81e-08!7;CL:0000127!1.81e-08!7;CL:0002453!1.81e-08!7;CL:0000055!2.69e-08!180;CL:0000183!8.26e-08!59;CL:0002556!5.01e-07!6 | |ontology_enrichment_celltype=CL:0000128!1.81e-08!7;CL:0000126!1.81e-08!7;CL:0000127!1.81e-08!7;CL:0002453!1.81e-08!7;CL:0000055!2.69e-08!180;CL:0000183!8.26e-08!59;CL:0002556!5.01e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000708;9.63e-20;3!CL:0000064;4.66e-19;3!CL:0000067;4.66e-19;3!CL:0005012;4.66e-19;3!CL:0002304;4.66e-19;3!CL:0000306;8.69e-15;4!CL:0002222;8.69e-15;4!CL:0002224;8.69e-15;4!CL:0000075;1.59e-10;27!CL:0002603;1.92e-09;3!CL:0000222;4.56e-08;1!CL:0000342;5.76e-08;1!CL:0002565;5.76e-08;1!CL:0000228;1.74e-07;1!CL:0002372;1.74e-07;1!CL:0002594;4.47e-07;4!CL:0000327;5.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,5.99e-20,3;CL:0000064,2.58e-19,3;CL:0000067,2.58e-19,3;CL:0005012,2.58e-19,3;CL:0002304,2.58e-19,3;CL:0000306,4.18e-15,4;CL:0002222,4.18e-15,4;CL:0002224,4.18e-15,4;CL:0000075,1.11e-10,27;CL:0002603,1.34e-09,3;CL:0000342,5.58e-08,1;CL:0002565,5.58e-08,1;CL:0000228,1.69e-07,1;CL:0002372,1.69e-07,1;CL:0000327,5.01e-07,15;CL:0002594,5.72e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!5.89e-10!11;UBERON:0003056!7.12e-09!61;UBERON:0000481!1.24e-08!347;UBERON:0000914!1.28e-08!83;UBERON:0002329!1.28e-08!83;UBERON:0003077!1.28e-08!83;UBERON:0003059!1.28e-08!83;UBERON:0007282!1.28e-08!83;UBERON:0009618!1.28e-08!83;UBERON:0007285!1.28e-08!83;UBERON:0000033!1.36e-08!123;UBERON:0000153!2.65e-08!129;UBERON:0007811!2.65e-08!129;UBERON:0000488!3.05e-08!4;UBERON:0003075!5.68e-08!86;UBERON:0007284!5.68e-08!86;UBERON:0002346!2.65e-07!90;UBERON:0001758!5.01e-07!6;UBERON:0003672!5.01e-07!6;UBERON:0000970!6.60e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.23e-27;11!UBERON:0000488;2.84e-25;4!UBERON:0001801;3.99e-21;14!UBERON:0003210;9.63e-20;3!UBERON:0001778;4.66e-19;3!UBERON:0001775;4.66e-19;3!UBERON:0002203;6.26e-17;6!UBERON:0001768;6.26e-17;6!UBERON:0002200;6.26e-17;6!UBERON:0000019;2.37e-15;19!UBERON:0000047;2.37e-15;19!UBERON:0004088;2.37e-15;19!UBERON:0010230;2.37e-15;19!UBERON:0010077;8.69e-15;4!UBERON:0005389;8.69e-15;4!UBERON:0000484;8.69e-15;4!UBERON:0000965;8.69e-15;4!UBERON:0001803;8.69e-15;4!UBERON:0000970;1.53e-14;20!UBERON:0006876;2.92e-14;11!UBERON:0002104;8.24e-14;21!UBERON:0001456;8.24e-14;21!UBERON:0000020;1.55e-12;23!UBERON:0001032;5.59e-12;24!UBERON:0004456;5.59e-12;24!UBERON:0010371;6.26e-09;31!UBERON:0002506;5.76e-08;1!UBERON:0001769;5.76e-08;1!UBERON:0007195;1.74e-07;1!UBERON:0001444;1.97e-07;48!UBERON:0001310;4.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.55e-27,11;UBERON:0000488,1.52e-25,4;UBERON:0001801,1.82e-21,14;UBERON:0003210,5.99e-20,3;UBERON:0001778,2.58e-19,3;UBERON:0001775,2.58e-19,3;UBERON:0002203,4.15e-17,6;UBERON:0001768,4.15e-17,6;UBERON:0002200,4.15e-17,6;UBERON:0010077,4.18e-15,4;UBERON:0005389,4.18e-15,4;UBERON:0000484,4.18e-15,4;UBERON:0002546,4.18e-15,4;UBERON:0000965,4.18e-15,4;UBERON:0001803,4.18e-15,4;UBERON:0003073,4.18e-15,4;UBERON:0005426,4.18e-15,4;UBERON:0000019,8.93e-15,20;UBERON:0000047,8.93e-15,20;UBERON:0010312,8.93e-15,20;UBERON:0004088,8.93e-15,20;UBERON:0010230,8.93e-15,20;UBERON:0003072,8.93e-15,20;UBERON:0004128,8.93e-15,20;UBERON:0003071,8.93e-15,20;UBERON:0006876,2.22e-14,11;UBERON:0000970,4.95e-14,21;UBERON:0002104,4.95e-14,21;UBERON:0001456,2.35e-13,22;UBERON:0000020,3.60e-12,24;UBERON:0001032,3.60e-12,24;UBERON:0004456,3.60e-12,24;UBERON:0001444,3.68e-11,49;UBERON:0000033,1.50e-09,56;UBERON:0005085,3.16e-09,31;UBERON:0000153,1.84e-08,62;UBERON:0007811,1.84e-08,62;UBERON:0002506,5.58e-08,1;UBERON:0001769,5.58e-08,1;UBERON:0000076,8.63e-08,8;UBERON:0007195,2.80e-07,1;UBERON:0001310,5.72e-07,4 | |||
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| ||
|short_description=p@chr3:124420828..124420842,+ | |short_description=p@chr3:124420828..124420842,+ | ||
}} | }} |
Latest revision as of 15:14, 29 July 2015
Short description: | p@chr3:124420828..124420842, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:124420828..124420842, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 5.99e-20 | 3 |
ciliated cell | 2.58e-19 | 3 |
ciliated epithelial cell | 2.58e-19 | 3 |
multi-ciliated epithelial cell | 2.58e-19 | 3 |
non-pigmented ciliary epithelial cell | 2.58e-19 | 3 |
crystallin accumulating cell | 4.18e-15 | 4 |
vertebrate lens cell | 4.18e-15 | 4 |
lens epithelial cell | 4.18e-15 | 4 |
columnar/cuboidal epithelial cell | 1.11e-10 | 27 |
astrocyte of the cerebellum | 1.34e-09 | 3 |
pigment cell (sensu Vertebrata) | 5.58e-08 | 1 |
iris pigment epithelial cell | 5.58e-08 | 1 |
multinucleate cell | 1.69e-07 | 1 |
myotube | 1.69e-07 | 1 |
extracellular matrix secreting cell | 5.01e-07 | 15 |
smooth muscle cell of the umbilical artery | 5.72e-07 | 4 |