FFCP PHASE1:Hg19::chr3:183208298..183208302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:183208298..183208302,- | |||
|coexpression_cluster_id=C4307 | |||
|description=CAGE_peak_at_chr3:183208298..183208302,- | |||
|id=chr3:183208298..183208302,- | |||
|ontology_enrichment_celltype=CL:0002087!2.81e-51!119;CL:0002031!2.68e-48!124;CL:0000988!1.51e-43!182;CL:0000738!2.33e-43!140;CL:0000037!1.01e-42!172;CL:0000566!1.01e-42!172;CL:0002032!1.01e-42!165;CL:0000837!1.01e-42!165;CL:0002194!9.83e-28!63;CL:0000576!9.83e-28!63;CL:0000040!9.83e-28!63;CL:0000559!9.83e-28!63;CL:0000839!6.30e-27!70;CL:0002057!1.34e-26!42;CL:0002009!1.63e-26!65;CL:0000557!2.27e-26!71;CL:0000860!3.53e-24!45;CL:0000766!8.14e-24!76;CL:0000542!2.58e-22!53;CL:0000051!2.58e-22!53;CL:0000838!4.66e-21!52;CL:0000763!4.02e-20!112;CL:0000049!4.02e-20!112;CL:0000945!6.08e-12!24;CL:0000826!6.08e-12!24;CL:0000134!2.23e-10!358;CL:0002320!8.83e-10!365;CL:0000084!2.92e-09!25;CL:0000827!2.92e-09!25;CL:0000219!1.23e-08!390;CL:0000624!7.97e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.00e-36;33!CL:0002057;7.00e-36;33!CL:0000473;2.87e-33;39!CL:0000234;2.87e-33;39!CL:0000576;2.04e-18;48!CL:0000766;1.30e-12;69!CL:0002087;2.03e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.92e-31,48;CL:0000234,1.92e-31,48;CL:0000860,7.07e-31,42;CL:0002057,7.07e-31,42;CL:0002194,8.01e-29,59;CL:0000576,8.01e-29,59;CL:0000040,8.01e-29,59;CL:0000559,8.01e-29,59;CL:0002009,7.99e-28,61;CL:0000839,1.38e-25,66;CL:0000557,3.53e-25,67;CL:0002087,7.80e-24,115;CL:0000766,2.64e-23,72;CL:0002031,4.47e-20,120;CL:0000738,9.08e-20,136;CL:0000988,1.62e-16,177;CL:0002032,2.70e-16,161;CL:0000837,2.70e-16,161;CL:0000037,1.66e-15,168;CL:0000763,7.10e-15,108;CL:0000049,7.10e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.41e-27;42!CL:0000049;3.99e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.15e-09!51;DOID:0060083!2.15e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.61e-11;1!DOID:0070004;8.61e-11;1!DOID:12603;8.61e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,6.77e-11,1;DOID:4960,7.46e-11,1;DOID:0070004,7.46e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-30!102;UBERON:0003061!1.17e-30!102;UBERON:0002193!1.32e-30!112;UBERON:0002371!4.45e-25!80;UBERON:0002405!1.39e-22!115;UBERON:0001474!2.03e-22!86;UBERON:0004765!3.31e-17!101;UBERON:0001434!3.31e-17!101;UBERON:0003081!6.47e-11!216;UBERON:0002384!2.08e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;8.61e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-25,76;UBERON:0001474,2.14e-23,82;UBERON:0002405,2.14e-23,93;UBERON:0002193,1.25e-22,108;UBERON:0002390,4.15e-22,98;UBERON:0003061,4.15e-22,98;UBERON:0004765,3.92e-21,90;UBERON:0001434,8.31e-19,100;UBERON:0000029,6.14e-11,1;UBERON:0003081,7.96e-11,203;UBERON:0002204,2.43e-10,167 | |||
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| ||
|short_description=p@chr3:183208298..183208302,- | |||
}} | }} |
Latest revision as of 18:45, 29 July 2015
Short description: | p@chr3:183208298..183208302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:183208298..183208302, - |
Coexpression cluster: | C4307_CD14_lymphoma_splenic_appendix_b_myeloma_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.92e-31 | 48 |
phagocyte | 1.92e-31 | 48 |
classical monocyte | 7.07e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.07e-31 | 42 |
monopoietic cell | 8.01e-29 | 59 |
monocyte | 8.01e-29 | 59 |
monoblast | 8.01e-29 | 59 |
promonocyte | 8.01e-29 | 59 |
macrophage dendritic cell progenitor | 7.99e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.38e-25 | 66 |
granulocyte monocyte progenitor cell | 3.53e-25 | 67 |
nongranular leukocyte | 7.80e-24 | 115 |
myeloid leukocyte | 2.64e-23 | 72 |
hematopoietic lineage restricted progenitor cell | 4.47e-20 | 120 |
leukocyte | 9.08e-20 | 136 |
hematopoietic cell | 1.62e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.70e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-16 | 161 |
hematopoietic stem cell | 1.66e-15 | 168 |
myeloid cell | 7.10e-15 | 108 |
common myeloid progenitor | 7.10e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.12e-25 | 76 |
bone element | 2.14e-23 | 82 |
immune system | 2.14e-23 | 93 |
hemolymphoid system | 1.25e-22 | 108 |
hematopoietic system | 4.15e-22 | 98 |
blood island | 4.15e-22 | 98 |
skeletal element | 3.92e-21 | 90 |
skeletal system | 8.31e-19 | 100 |
lymph node | 6.14e-11 | 1 |
lateral plate mesoderm | 7.96e-11 | 203 |
musculoskeletal system | 2.43e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 6.77e-11 | 1 |
bone marrow cancer | 7.46e-11 | 1 |
myeloma | 7.46e-11 | 1 |