FFCP PHASE1:Hg19::chr3:187968293..187968303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:187968293..187968303,+ | |||
|description=CAGE_peak_at_chr3:187968293..187968303,+ | |||
|id=chr3:187968293..187968303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.11e-08;3!CL:0000064;5.68e-08;3!CL:0000067;5.68e-08;3!CL:0005012;5.68e-08;3!CL:0002304;5.68e-08;3!CL:0002619;1.00e-07;3!CL:0000594;1.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.16e-08,3;CL:0000064,4.54e-08,3;CL:0000067,4.54e-08,3;CL:0005012,4.54e-08,3;CL:0002304,4.54e-08,3;CL:0000594,9.72e-08,3;CL:0002619,1.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.64e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.68e-08;3!UBERON:0001775;5.68e-08;3!UBERON:0002146;6.21e-07;1!UBERON:0001389;6.21e-07;1!UBERON:0000026;6.21e-07;1!UBERON:0008784;6.21e-07;1!UBERON:0006058;6.21e-07;1!UBERON:0003663;6.21e-07;1!UBERON:0004256;6.21e-07;1!UBERON:0004708;6.21e-07;1!UBERON:0002101;6.21e-07;1!UBERON:0004709;6.21e-07;1!UBERON:0005623;6.21e-07;1!UBERON:0002529;6.21e-07;1!UBERON:0010538;6.21e-07;1!UBERON:0003661;6.21e-07;1!UBERON:0010890;6.21e-07;1!UBERON:0002471;6.21e-07;1!UBERON:0001383;6.21e-07;1!UBERON:0010758;6.21e-07;1!UBERON:0010707;6.21e-07;1!UBERON:0000978;6.21e-07;1!UBERON:0002103;6.21e-07;1!UBERON:0001665;6.21e-07;1!UBERON:0003823;6.21e-07;1!UBERON:0000154;6.21e-07;1!UBERON:0010709;6.21e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.54e-08,3;UBERON:0001775,4.54e-08,3;UBERON:0005418,6.23e-07,1;UBERON:0001389,6.23e-07,1;UBERON:0000026,6.23e-07,1;UBERON:0008784,6.23e-07,1;UBERON:0006058,6.23e-07,1;UBERON:0003663,6.23e-07,1;UBERON:0004256,6.23e-07,1;UBERON:0004708,6.23e-07,1;UBERON:0002101,6.23e-07,1;UBERON:0004709,6.23e-07,1;UBERON:0002529,6.23e-07,1;UBERON:0010538,6.23e-07,1;UBERON:0003661,6.23e-07,1;UBERON:0010890,6.23e-07,1;UBERON:0002471,6.23e-07,1;UBERON:0001383,6.23e-07,1;UBERON:0004357,6.23e-07,1;UBERON:0004347,6.23e-07,1;UBERON:0005420,6.23e-07,1;UBERON:0005732,6.23e-07,1;UBERON:0010758,6.23e-07,1;UBERON:0010707,6.23e-07,1;UBERON:0000978,6.23e-07,1;UBERON:0002103,6.23e-07,1;UBERON:0001665,6.23e-07,1;UBERON:0003823,6.23e-07,1;UBERON:0000154,6.23e-07,1;UBERON:0010709,6.23e-07,1;UBERON:0005733,6.23e-07,1;UBERON:0005730,6.23e-07,1;UBERON:0002146,6.59e-07,1;UBERON:0005623,6.59e-07,1 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.958120975510189,1.38096903554283,0,0,0,0,0,0,0,0,0,0.774672005803016,0.142169232487422,0,0,0.401088894940283,0.434021741431704,1.11957737119962,1.29557466407592,0,0.436194716338694,0,0,0,0,0,0.575384784644301,1.0246428261164,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0,0,0.622822248995575,1.25624332628372,0,0.434377689410233,0.605399502633369,0,0,0,0.425208599930087,0,0,0.750884464207532,0,0.570025487482497,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0,0.334372990781356,0,0,0,0.334231370655521,0,0.221533894583621,0,1.40900451698243,0.910415432919148,1.64437904603676,1.10540007114339,0.289803085735052,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.802320587350522,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,2.88248216701333,1.31752178539689,0.589405839739707,0,0,0.324547393654683,1.0447784237956,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.535798369704479,0.44905874525234,0.563057402416611,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0.352303495931295,0.809364721840658,0.280901613404497,0,0.61417158655884,0.413303124703062,0,0.494533858557114,0,0,0.673344455816265,0.625592599359821,0.277064115484183,0.438977620880838,0,0,0,0.89694817844431,0,0,0,0,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0.504867548488229,0,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,0.197030760201927,0.431255149719035,0.641715181398742,0.254094624222463,0,0.773288812777695,0.167516265334349,1.27587750330633,3.74503511973591,5.9832291840805,0,0.12269149171914,0,0,0.831883446123229,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.206768026122887,0.862856803274467,0.533637789017222,0,0,0,0.496215615637554,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0.770243085573222,0.15350367472613,0.137836572484531,1.18162269355101,1.30515024522806,0.340906509664404,0.0890320356467374,0,0,1.91419068741876,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.762520775695299,0,0,0,0,0.359744915166629,1.37268514868027,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,1.92495971052672,0.490080431962063,0,0,0.284567373393656,0,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.842391534340376,0,0,0,0.50787533340481,0,0,0,0.687010689511529,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0.33307196799782,0,0.561421621224659,0.586032717087576,0,0,0,0,0,0,0,0.422008249231538,0.333926115068718,0,0.211125408127993,2.78947183551498,1.10513566212459,0.251932747854276,0.409074730008619,0,0.311039587661807,0.359473404589307,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0.482385754501632,0,0.110579259931225,0.295547618953547,0,0.21787692703798,0.278847488557207,0.692552326534174,0.341826167541004,0.23056390438806,0.0897576444097721,0.325942115766024,0.638002319463839,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0.489698424477443,0,0.649165919226273,1.99052386215701,0.176915129006678,0,0.296521128680622,0.247127877893006,0.626531697032732,0.134802265961354,0.802577647298789,0.234264445725339,0,0.19566461893209,0.242780379534093,0.789168805698781,2.41981432097328,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0.0979923974143777,0.0870592065804026,1.22308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| |||
|short_description=p@chr3:187968293..187968303,+ | |||
}} |
Latest revision as of 19:17, 29 July 2015
Short description: | p@chr3:187968293..187968303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:187968293..187968303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.16e-08 | 3 |
ciliated cell | 4.54e-08 | 3 |
ciliated epithelial cell | 4.54e-08 | 3 |
multi-ciliated epithelial cell | 4.54e-08 | 3 |
non-pigmented ciliary epithelial cell | 4.54e-08 | 3 |
skeletal muscle satellite cell | 9.72e-08 | 3 |
adult endothelial progenitor cell | 1.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.54e-08 | 3 |
ciliary body | 4.54e-08 | 3 |
hindlimb bud | 6.23e-07 | 1 |
soleus muscle | 6.23e-07 | 1 |
appendage | 6.23e-07 | 1 |
lower limb segment | 6.23e-07 | 1 |
multi-limb segment region | 6.23e-07 | 1 |
hindlimb muscle | 6.23e-07 | 1 |
hindlimb zeugopod muscle | 6.23e-07 | 1 |
paired limb/fin | 6.23e-07 | 1 |
limb | 6.23e-07 | 1 |
pelvic appendage | 6.23e-07 | 1 |
limb segment | 6.23e-07 | 1 |
paired limb/fin segment | 6.23e-07 | 1 |
limb muscle | 6.23e-07 | 1 |
pelvic complex muscle | 6.23e-07 | 1 |
zeugopod | 6.23e-07 | 1 |
muscle of leg | 6.23e-07 | 1 |
paired limb/fin bud | 6.23e-07 | 1 |
limb bud | 6.23e-07 | 1 |
pelvic appendage bud | 6.23e-07 | 1 |
limb/fin field | 6.23e-07 | 1 |
subdivision of organism along appendicular axis | 6.23e-07 | 1 |
appendage girdle complex | 6.23e-07 | 1 |
leg | 6.23e-07 | 1 |
hindlimb | 6.23e-07 | 1 |
triceps surae | 6.23e-07 | 1 |
hindlimb zeugopod | 6.23e-07 | 1 |
posterior region of body | 6.23e-07 | 1 |
pelvic complex | 6.23e-07 | 1 |
limb field | 6.23e-07 | 1 |
hindlimb/pelvic fin field | 6.23e-07 | 1 |
pulmonary valve | 6.59e-07 | 1 |
semi-lunar valve | 6.59e-07 | 1 |