FFCP PHASE1:Hg19::chr3:2144877..2144881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:2144877..2144881,+ | |||
|description=CAGE_peak_at_chr3:2144877..2144881,+ | |description=CAGE_peak_at_chr3:2144877..2144881,+ | ||
|id=chr3:2144877..2144881,+ | |id=chr3:2144877..2144881,+ | ||
|ontology_enrichment_celltype=CL:0000138;8.72e-07;6 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;8.72e-07;6 | ||
|ontology_enrichment_disease=DOID:3371;5.97e-34;1!DOID:4549;5.97e-34;1!DOID:5861;5.97e-34;1!DOID:6496;5.97e-34;1!DOID:5409;1.50e-09;4!DOID:4362;6.78e-08;5!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000058,8.02e-07,6;CL:0000138,8.02e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0002418;2.74e-12;3!UBERON:0004755;2.74e-12;3!UBERON:0001872;5.35e-08;5!UBERON:0002021;5.73e-08;5!UBERON:0001950;2.44e-07;20!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6!UBERON:0002619;8.87e-07;22 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.97e-34;1!DOID:4549;5.97e-34;1!DOID:5861;5.97e-34;1!DOID:6496;5.97e-34;1!DOID:5409;1.50e-09;4!DOID:4362;6.78e-08;5!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.61e-34,1;DOID:4549,3.61e-34,1;DOID:5861,3.61e-34,1;DOID:6496,3.61e-34,1;DOID:5409,1.44e-09,4;DOID:4362,7.01e-08,5;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.96e-22!22;UBERON:0001950!8.38e-22!20;UBERON:0007023!1.14e-20!115;UBERON:0001049!1.18e-20!57;UBERON:0005068!1.18e-20!57;UBERON:0006241!1.18e-20!57;UBERON:0007135!1.18e-20!57;UBERON:0002346!1.27e-19!90;UBERON:0000956!3.97e-19!25;UBERON:0000203!3.97e-19!25;UBERON:0002020!8.24e-19!34;UBERON:0003528!8.24e-19!34;UBERON:0002616!6.36e-18!59;UBERON:0001869!7.91e-18!32;UBERON:0003075!7.11e-17!86;UBERON:0007284!7.11e-17!86;UBERON:0000955!8.94e-17!69;UBERON:0006238!8.94e-17!69;UBERON:0001893!1.67e-16!34;UBERON:0002780!2.33e-16!41;UBERON:0001890!2.33e-16!41;UBERON:0006240!2.33e-16!41;UBERON:0003080!7.69e-16!42;UBERON:0002791!2.17e-15!33;UBERON:0005743!2.63e-14!86;UBERON:0001017!3.35e-14!82;UBERON:0000073!3.45e-13!94;UBERON:0001016!3.45e-13!94;UBERON:0003056!9.40e-13!61;UBERON:0000153!1.51e-11!129;UBERON:0007811!1.51e-11!129;UBERON:0000924!3.42e-10!173;UBERON:0006601!3.42e-10!173;UBERON:0000033!7.07e-10!123;UBERON:0001871!3.07e-09!7;UBERON:0004121!1.49e-08!169;UBERON:0000200!2.37e-08!6;UBERON:0002680!6.35e-08!9;UBERON:0001895!6.35e-08!9;UBERON:0010092!6.35e-08!9;UBERON:0002771!3.82e-07!3;UBERON:0002021!4.70e-07!5;UBERON:0001872!5.01e-07!5;UBERON:0000481!6.18e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.74e-12;3!UBERON:0004755;2.74e-12;3!UBERON:0001872;5.35e-08;5!UBERON:0002021;5.73e-08;5!UBERON:0001950;2.44e-07;20!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6!UBERON:0002619;8.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.31e-12,3;UBERON:0004755,2.31e-12,3;UBERON:0001872,5.35e-08,5;UBERON:0002021,5.73e-08,5;UBERON:0001950,2.44e-07,20;UBERON:0002619,8.87e-07,22;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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| ||
|short_description=p@chr3:2144877..2144881,+ | |short_description=p@chr3:2144877..2144881,+ | ||
}} | }} |
Latest revision as of 20:05, 29 July 2015
Short description: | p@chr3:2144877..2144881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:2144877..2144881, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.02e-07 | 6 |
chondrocyte | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.31e-12 | 3 |
skeletal tissue | 2.31e-12 | 3 |
parietal lobe | 5.35e-08 | 5 |
occipital lobe | 5.73e-08 | 5 |
neocortex | 2.44e-07 | 20 |
regional part of cerebral cortex | 8.87e-07 | 22 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.61e-34 | 1 |
extraosseous chondrosarcoma | 3.61e-34 | 1 |
myxoid chondrosarcoma | 3.61e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 3.61e-34 | 1 |
lung small cell carcinoma | 1.44e-09 | 4 |
cervical cancer | 7.01e-08 | 5 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |