FFCP PHASE1:Hg19::chr3:6221525..6221536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:6221525..6221536,- | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr3:6221525..6221536,- | |description=CAGE_peak_at_chr3:6221525..6221536,- | ||
Latest revision as of 23:04, 29 July 2015
| Short description: | p@chr3:6221525..6221536, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:6221525..6221536, - |
| Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr3:6221525..6221536- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Schwann cell | 1.28e-53 | 2 |
| glial cell (sensu Vertebrata) | 8.97e-22 | 15 |
| glial cell | 8.97e-22 | 15 |
| glioblast | 8.97e-22 | 15 |
| glioblast (sensu Vertebrata) | 8.97e-22 | 15 |
| neuron associated cell | 1.39e-19 | 17 |
| neuron associated cell (sensu Vertebrata) | 1.39e-19 | 17 |
| neural cell | 4.74e-14 | 25 |
| crystallin accumulating cell | 3.79e-11 | 4 |
| vertebrate lens cell | 3.79e-11 | 4 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 1.03e-18 | 8 |
| cuboidal epithelium | 3.79e-11 | 4 |
| transparent eye structure | 3.79e-11 | 4 |
| simple cuboidal epithelium | 3.79e-11 | 4 |
| cranial placode | 3.79e-11 | 4 |
| lens of camera-type eye | 3.79e-11 | 4 |
| epithelium of lens | 3.79e-11 | 4 |
| lens placode | 3.79e-11 | 4 |
| lens vesicle | 3.79e-11 | 4 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| osteosarcoma | 1.48e-40 | 1 |
| connective tissue cancer | 6.34e-08 | 6 |
| musculoskeletal system cancer | 6.34e-08 | 6 |
Showing 1 to 3 of 3 entries
