FFCP PHASE1:Hg19::chr4:114880636..114880650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:114880636..114880650,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr4:114880636..114880650,+ | |description=CAGE_peak_at_chr4:114880636..114880650,+ | ||
|id=chr4:114880636..114880650,+ | |id=chr4:114880636..114880650,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-16!254;CL:0000220!3.77e-13!246;CL:0002321!8.31e-13!248;CL:0002139!6.30e-11!24;CL:0000548!9.78e-11!679;CL:0000004!9.78e-11!679;CL:0000255!9.78e-11!679;CL:0000012!2.04e-10!682;CL:0000076!1.10e-09!62;CL:0000222!1.74e-09!119;CL:0000213!7.31e-09!57;CL:0000215!7.31e-09!57;CL:0000071!6.40e-08!18;CL:0002546!6.40e-08!18;CL:0000115!1.82e-07!35 | |ontology_enrichment_celltype=CL:0000066!1.94e-16!254;CL:0000220!3.77e-13!246;CL:0002321!8.31e-13!248;CL:0002139!6.30e-11!24;CL:0000548!9.78e-11!679;CL:0000004!9.78e-11!679;CL:0000255!9.78e-11!679;CL:0000012!2.04e-10!682;CL:0000076!1.10e-09!62;CL:0000222!1.74e-09!119;CL:0000213!7.31e-09!57;CL:0000215!7.31e-09!57;CL:0000071!6.40e-08!18;CL:0002546!6.40e-08!18;CL:0000115!1.82e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.13e-11;3!CL:0002139;5.23e-08;24!CL:0000115;1.14e-07;36!CL:1000746;1.35e-07;7!CL:1000612;1.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.00e-11,3;CL:0000115,4.39e-09,36;CL:0002139,5.76e-08,24;CL:1000746,2.44e-07,7;CL:1000612,2.44e-07,7;CL:0002078,7.82e-07,45;CL:0000066,9.89e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;4.76e-08;2!DOID:0050615;3.16e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.03e-08,2;DOID:0050615,2.60e-07,16;DOID:3908,8.71e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000487!9.95e-10!22;UBERON:0002049!8.94e-09!79;UBERON:0007798!8.94e-09!79;UBERON:0000490!1.68e-08!138;UBERON:0001986!6.40e-08!18;UBERON:0004638!6.40e-08!18;UBERON:0004852!6.40e-08!18;UBERON:0006914!7.04e-08!25;UBERON:0000055!5.40e-07!69 | |ontology_enrichment_uberon=UBERON:0000487!9.95e-10!22;UBERON:0002049!8.94e-09!79;UBERON:0007798!8.94e-09!79;UBERON:0000490!1.68e-08!138;UBERON:0001986!6.40e-08!18;UBERON:0004638!6.40e-08!18;UBERON:0004852!6.40e-08!18;UBERON:0006914!7.04e-08!25;UBERON:0000055!5.40e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004821;6.13e-11;3!UBERON:0007499;6.13e-11;3!UBERON:0003215;6.13e-11;3!UBERON:0010368;6.13e-11;3!UBERON:0009911;6.13e-11;3!UBERON:0002299;6.13e-11;3!UBERON:0006524;6.13e-11;3!UBERON:0008874;6.13e-11;3!UBERON:0002169;6.13e-11;3!UBERON:0004894;6.13e-11;3!UBERON:0000487;8.06e-09;22!UBERON:0000488;1.62e-08;4!UBERON:0009856;2.63e-08;4!UBERON:0004903;4.76e-08;2!UBERON:0002173;4.76e-08;2!UBERON:0002186;4.76e-08;2!UBERON:0006914;1.34e-07;25!UBERON:0000074;1.35e-07;7!UBERON:0001229;1.35e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004821,3.00e-11,3;UBERON:0003215,3.00e-11,3;UBERON:0010368,3.00e-11,3;UBERON:0009911,3.00e-11,3;UBERON:0002299,3.00e-11,3;UBERON:0006524,3.00e-11,3;UBERON:0008874,3.00e-11,3;UBERON:0002169,3.00e-11,3;UBERON:0004894,3.00e-11,3;UBERON:0000487,7.00e-09,22;UBERON:0000488,1.76e-08,4;UBERON:0004903,3.03e-08,2;UBERON:0002173,3.03e-08,2;UBERON:0002186,3.03e-08,2;UBERON:0006914,1.18e-07,25;UBERON:0010532,2.44e-07,7;UBERON:0000074,2.44e-07,7;UBERON:0001229,2.44e-07,7;UBERON:0001230,2.44e-07,7;UBERON:0003220,2.44e-07,7;UBERON:0005749,2.44e-07,7;UBERON:0004199,2.44e-07,7;UBERON:0004209,2.44e-07,7;UBERON:0004198,2.44e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,1.47440361900905,1.39560233594486,0,0,0.495065411840187,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,1.5905718941022,0,2.26883561193763,0.886917589850256,1.22968699970376,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0,0,0,1.04497483268405,1.29208379584664,2.84613010149368,2.00832367658802,0.402829317109147,3.80136052859256,0.24406205754817,0.735326160691737,0,2.94689103337463,0.44905874525234,0.337834441449967,3.06633274931766,0.949265659568129,0.366403487860815,0,0,0,0,0.633152558322899,10.7251436458707,0,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0.70296429550139,0,0,0,0.117434498643765,0.647491777472526,0.280901613404497,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0.505008341862199,0.375355559615893,1.38532057742091,0,0.30648779579902,0,0.453728732640084,1.4351170855109,0.213557388818567,0,0,0.206105058476878,0.772921620136887,0,2.53164498361899,0.0974370051611986,0.757301322732344,0.460249493211497,0,0.710019185033229,0.302256294682921,0.339121184620975,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,3.60292401626904,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.821860859650752,0.433099343283221,0,0.761016608938393,0,0.858486162094873,0,0,0,0.93733833986777,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.51336800074665,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,1.0656887160644,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,1.42636905040718,2.17171960001369,0,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.613457458595699,0,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0,1.45031339509947,0.200506470303285,0.184161977871793,0.34444334449382,0,0,0,0.15403067420883,0,0,0.527758144464379,0,1.02056223165909,1.0795795805107,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,1.19040304263846,1.65018999841176,1.72279661398852,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,1.15699440752685,0.192190067365106,8.29482631214797,0.6069466851333,0,1.5740617341532,0,0.308033580176089,0,0,0,0.286249773483982,0,3.48017367190598,0,0.511795582622668,0,0,0,0,0,0,0.404364963146632,3.17020642346017,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,1.06428319221179,0,0,0,0,0.673554789078584,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0.95497793895076,5.64232893582013,0,0,0,0.556543525114529,0,0,0,0,0,1.1249555075237,0,0.622079175323615,0.359473404589307,0,0,0,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0.227586896570999,7.11910220819746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0.284609546029793,0.693373365065693,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.514784993585894,0.432164393964449,0.745515213392595,0,0,0.104602846312333,1.83596791745379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,1.16160370171347,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.747511887973863,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0,0.465788870628778,0,0,1.04349012362347,0.300515217994437,2.28483127301277,0,0.181848659202559,0.107410557042488,0.928067519756987,0,2.40016658797892,0.343395705182793,0,2.52369796457302,0.192619830407303,0.643324774124777,2.60994291965212,0,0.231522474323834,0.489473409012935,0.179088841081487,0,0.877136198314828,0.706756583783524,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,2.94927490504463,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0.3180043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| ||
|short_description=p@chr4:114880636..114880650,+ | |short_description=p@chr4:114880636..114880650,+ | ||
}} | }} |
Latest revision as of 01:06, 30 July 2015
Short description: | p@chr4:114880636..114880650, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:114880636..114880650, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.00e-11 | 3 |
endothelial cell | 4.39e-09 | 36 |
endothelial cell of vascular tree | 5.76e-08 | 24 |
glomerular cell | 2.44e-07 | 7 |
kidney corpuscule cell | 2.44e-07 | 7 |
meso-epithelial cell | 7.82e-07 | 45 |
epithelial cell | 9.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
pulmonary alveolus epithelium | 3.00e-11 | 3 |
alveolus | 3.00e-11 | 3 |
pulmonary lobule | 3.00e-11 | 3 |
lobule | 3.00e-11 | 3 |
alveolus of lung | 3.00e-11 | 3 |
alveolar system | 3.00e-11 | 3 |
pulmonary acinus | 3.00e-11 | 3 |
alveolar sac | 3.00e-11 | 3 |
alveolar wall | 3.00e-11 | 3 |
simple squamous epithelium | 7.00e-09 | 22 |
atypical epithelium | 1.76e-08 | 4 |
bronchoalveolar duct junction | 3.03e-08 | 2 |
alveolar duct | 3.03e-08 | 2 |
bronchiole | 3.03e-08 | 2 |
squamous epithelium | 1.18e-07 | 25 |
primitive nephron | 2.44e-07 | 7 |
renal glomerulus | 2.44e-07 | 7 |
renal corpuscle | 2.44e-07 | 7 |
glomerular capsule | 2.44e-07 | 7 |
metanephric mesenchyme | 2.44e-07 | 7 |
glomerular tuft | 2.44e-07 | 7 |
S-shaped body | 2.44e-07 | 7 |
renal vesicle | 2.44e-07 | 7 |
comma-shaped body | 2.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.03e-08 | 2 |
respiratory system cancer | 2.60e-07 | 16 |
non-small cell lung carcinoma | 8.71e-07 | 5 |