FFCP PHASE1:Hg19::chr4:115286093..115286110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:115286093..115286110,- | |||
|coexpression_cluster_id=C2773 | |||
|description=CAGE_peak_at_chr4:115286093..115286110,- | |description=CAGE_peak_at_chr4:115286093..115286110,- | ||
|id=chr4:115286093..115286110,- | |id=chr4:115286093..115286110,- | ||
|ontology_enrichment_celltype=CL:0000055!8.12e-27!180;CL:0000680!5.11e-17!57;CL:0000056!5.11e-17!57;CL:0000355!5.11e-17!57;CL:0000183!6.20e-16!59;CL:0000187!2.33e-15!54;CL:0000192!8.27e-15!42;CL:0000514!8.27e-15!42;CL:0000359!8.97e-14!32;CL:0000057!1.14e-13!75;CL:0000393!2.27e-13!60;CL:0000211!2.27e-13!60;CL:0002620!2.48e-11!23;CL:0000222!5.74e-10!119;CL:0000144!1.27e-09!625;CL:0002539!9.88e-09!10;CL:0002371!1.37e-08!591;CL:0000548!5.15e-07!679;CL:0000004!5.15e-07!679;CL:0000255!5.15e-07!679;CL:0000012!9.05e-07!682 | |ontology_enrichment_celltype=CL:0000055!8.12e-27!180;CL:0000680!5.11e-17!57;CL:0000056!5.11e-17!57;CL:0000355!5.11e-17!57;CL:0000183!6.20e-16!59;CL:0000187!2.33e-15!54;CL:0000192!8.27e-15!42;CL:0000514!8.27e-15!42;CL:0000359!8.97e-14!32;CL:0000057!1.14e-13!75;CL:0000393!2.27e-13!60;CL:0000211!2.27e-13!60;CL:0002620!2.48e-11!23;CL:0000222!5.74e-10!119;CL:0000144!1.27e-09!625;CL:0002539!9.88e-09!10;CL:0002371!1.37e-08!591;CL:0000548!5.15e-07!679;CL:0000004!5.15e-07!679;CL:0000255!5.15e-07!679;CL:0000012!9.05e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.46e-16;23!CL:0000359;1.17e-13;32!CL:0002539;4.43e-12;10!CL:0000192;2.16e-10;43!CL:0000197;5.28e-08;6!CL:0000098;5.28e-08;6!CL:0002167;5.28e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.58e-16,23;CL:0000359,2.45e-14,32;CL:0000192,6.65e-13,43;CL:0000514,6.65e-13,43;CL:0002539,2.94e-12,10;CL:0000680,9.33e-10,58;CL:0000056,9.33e-10,58;CL:0000355,9.33e-10,58;CL:0000057,2.64e-09,76;CL:0000187,3.58e-09,55;CL:0000197,5.39e-08,6;CL:0000098,5.39e-08,6;CL:0002167,5.39e-08,6;CL:0000393,7.06e-08,61;CL:0000211,7.06e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.16e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.16e-13;5!DOID:450;7.16e-13;5!DOID:66;7.16e-13;5!DOID:423;7.16e-13;5!DOID:0080000;7.16e-13;5!DOID:11722;7.16e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.05e-13,5;DOID:450,6.05e-13,5;DOID:66,6.05e-13,5;DOID:423,6.05e-13,5;DOID:0080000,6.05e-13,5;DOID:11722,6.05e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.42e-18!83;UBERON:0002329!4.42e-18!83;UBERON:0003077!4.42e-18!83;UBERON:0003059!4.42e-18!83;UBERON:0007282!4.42e-18!83;UBERON:0009618!4.42e-18!83;UBERON:0007285!4.42e-18!83;UBERON:0001134!7.97e-16!61;UBERON:0002036!7.97e-16!61;UBERON:0003082!7.97e-16!61;UBERON:0002385!6.73e-15!63;UBERON:0001015!6.73e-15!63;UBERON:0000383!6.73e-15!63;UBERON:0004290!1.48e-14!70;UBERON:0000486!3.50e-13!82;UBERON:0005256!9.24e-13!143;UBERON:0004872!5.31e-11!84;UBERON:0004237!9.88e-09!10;UBERON:0004695!9.88e-09!10;UBERON:0002111!9.88e-09!10;UBERON:0004178!9.88e-09!10;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0001981!1.20e-08!60;UBERON:0007500!1.20e-08!60;UBERON:0004537!1.20e-08!60;UBERON:0006965!1.20e-08!60;UBERON:0000475!3.76e-08!365;UBERON:0004573!4.03e-08!33;UBERON:0004571!4.03e-08!33;UBERON:0002100!8.51e-08!216;UBERON:0007100!8.59e-08!27;UBERON:0002049!1.10e-07!79;UBERON:0007798!1.10e-07!79;UBERON:0001135!1.30e-07!15;UBERON:0000490!1.37e-07!138;UBERON:0001009!2.35e-07!113;UBERON:0003102!4.86e-07!95;UBERON:0000055!6.42e-07!69;UBERON:0003914!7.70e-07!118 | |ontology_enrichment_uberon=UBERON:0000914!4.42e-18!83;UBERON:0002329!4.42e-18!83;UBERON:0003077!4.42e-18!83;UBERON:0003059!4.42e-18!83;UBERON:0007282!4.42e-18!83;UBERON:0009618!4.42e-18!83;UBERON:0007285!4.42e-18!83;UBERON:0001134!7.97e-16!61;UBERON:0002036!7.97e-16!61;UBERON:0003082!7.97e-16!61;UBERON:0002385!6.73e-15!63;UBERON:0001015!6.73e-15!63;UBERON:0000383!6.73e-15!63;UBERON:0004290!1.48e-14!70;UBERON:0000486!3.50e-13!82;UBERON:0005256!9.24e-13!143;UBERON:0004872!5.31e-11!84;UBERON:0004237!9.88e-09!10;UBERON:0004695!9.88e-09!10;UBERON:0002111!9.88e-09!10;UBERON:0004178!9.88e-09!10;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0001981!1.20e-08!60;UBERON:0007500!1.20e-08!60;UBERON:0004537!1.20e-08!60;UBERON:0006965!1.20e-08!60;UBERON:0000475!3.76e-08!365;UBERON:0004573!4.03e-08!33;UBERON:0004571!4.03e-08!33;UBERON:0002100!8.51e-08!216;UBERON:0007100!8.59e-08!27;UBERON:0002049!1.10e-07!79;UBERON:0007798!1.10e-07!79;UBERON:0001135!1.30e-07!15;UBERON:0000490!1.37e-07!138;UBERON:0001009!2.35e-07!113;UBERON:0003102!4.86e-07!95;UBERON:0000055!6.42e-07!69;UBERON:0003914!7.70e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.43e-12;10!UBERON:0004695;4.43e-12;10!UBERON:0002111;4.43e-12;10!UBERON:0004178;4.43e-12;10!UBERON:0001135;5.84e-10;15!UBERON:0002097;1.28e-09;41!UBERON:0000947;1.84e-08;21!UBERON:0010191;1.84e-08;21!UBERON:0002199;6.96e-08;46!UBERON:0002416;6.96e-08;46!UBERON:0001637;9.24e-08;42!UBERON:0003509;9.24e-08;42!UBERON:0004572;9.24e-08;42!UBERON:0004573;2.78e-07;33!UBERON:0004571;2.78e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.94e-12,10;UBERON:0004695,2.94e-12,10;UBERON:0002111,2.94e-12,10;UBERON:0004178,2.94e-12,10;UBERON:0002097,6.06e-12,41;UBERON:0001637,1.04e-11,42;UBERON:0003509,1.04e-11,42;UBERON:0004572,1.04e-11,42;UBERON:0007500,1.38e-10,59;UBERON:0001981,1.38e-10,59;UBERON:0004537,1.38e-10,59;UBERON:0006965,1.38e-10,59;UBERON:0002199,3.21e-10,46;UBERON:0002416,3.21e-10,46;UBERON:0001135,4.31e-10,15;UBERON:0004872,6.35e-09,83;UBERON:0007524,7.07e-09,73;UBERON:0001134,7.58e-09,62;UBERON:0002036,7.58e-09,62;UBERON:0003082,7.58e-09,62;UBERON:0002049,8.89e-09,78;UBERON:0007798,8.89e-09,78;UBERON:0004573,1.09e-08,33;UBERON:0004571,1.09e-08,33;UBERON:0000947,1.30e-08,21;UBERON:0010191,1.30e-08,21;UBERON:0000055,1.41e-08,68;UBERON:0002385,1.95e-08,64;UBERON:0001015,1.95e-08,64;UBERON:0000383,1.95e-08,64;UBERON:0002329,4.00e-08,71;UBERON:0003059,4.00e-08,71;UBERON:0007282,4.00e-08,71;UBERON:0004290,4.00e-08,71;UBERON:0009618,4.00e-08,71;UBERON:0003077,5.98e-08,72;UBERON:0007285,5.98e-08,72;UBERON:0007503,7.42e-08,78;UBERON:0003104,4.60e-07,160;UBERON:0009142,4.60e-07,160;UBERON:0003102,8.16e-07,99 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.982935746006035,0.697801167972428,0.436882744260345,0.791300934685361,1.11389717664042,0,6.05092631806598,5.42425075221579,5.84248072309899,3.41552959153355,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.64619665163954,5.03154887090231,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0,3.56400857184616,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,1.31693286264251,10.1140972613676,0.901428353439581,1.47461838108027,3.22901344239952,5.76604949810132,3.17897851739343,1.50045548042201,1.54578793857658,0.257640540045629,1.67505170698431,1.0126579934476,0.389748020644795,1.26216887122057,4.05019554026117,0.969876340912871,1.42003837006646,3.92933183087797,3.05209066158878,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.939269553886573,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,0.517086863031111,0,0,1.59562869950922,1.04007436911366,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0.904318131178758,2.61460037580088,0.799783929456456,0,0,0,14.6171161849865,8.04033550838797,0,4.63300181336253,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,14.3499894456257,15.1664640477587,9.93525214713788,7.26276772954822,1.20378439891088,0,0,1.99267679560631,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0.744323423456331,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,1.44768529029247,0,0.154209693802656,0,0.328508624055237,0,0.232420756919918,0,0,0,0.229628896329213,0.364182336013434,1.57349297951309,0,0.231046011313244,0,1.46139224653261,0.633309773357254,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0,0.0915694648183434,0,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.413509717453592,0,0.145016693914229,0.255679882248303,0.712256285173899,0,0,0,0,2.78907329578371,1.5740617341532,0,0.616067160352178,1.59691809095107,0.869932992075073,0.74129687641568,1.14499909393593,0.744316738719335,2.21465597303108,1.14378116354295,2.55897791311334,0,0,0,2.51821440616641,0.823611089208164,0,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,3.5076070820301,0,0,2.63783490051515,1.239293992399,0,0.143411352204052,0.785992328104969,4.280052617775,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,10.3937638291424,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,28.9266816525481,0,0,0,0,0,30.006987339052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0.429765441419957,0,0.558564802544508,1.3749625440701,1.43574604915363,0.199679000498991,0.858452096273142,2.23171457441873,0.268733889946905,3.96329871896644,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,2.17199840701485,4.32110745600634,0.979762080328227,1.19730191562487,0,3.9189245010647,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.50313580350515,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,0.150257608997218,0,0.406870733204662,0.909243296012797,0.107410557042488,0.928067519756987,0.796191777397232,11.2007774105683,0.686791410365586,0,79.4964858840501,0.192619830407303,0,1.04397716786085,0.226705925512272,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0,2.07258205038719,0,0,0,0,0,0.327609848846413,0,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,6.70084293012299,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,15.2552838186867,0,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.1707184770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| ||
|short_description=p@chr4:115286093..115286110,- | |short_description=p@chr4:115286093..115286110,- | ||
}} | }} |
Latest revision as of 01:07, 30 July 2015
Short description: | p@chr4:115286093..115286110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:115286093..115286110, - |
Coexpression cluster: | C2773_mesodermal_basal_bone_Multipotent_osteoclastoma_Fibroblast_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.58e-16 | 23 |
vascular associated smooth muscle cell | 2.45e-14 | 32 |
smooth muscle cell | 6.65e-13 | 43 |
smooth muscle myoblast | 6.65e-13 | 43 |
aortic smooth muscle cell | 2.94e-12 | 10 |
muscle precursor cell | 9.33e-10 | 58 |
myoblast | 9.33e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.33e-10 | 58 |
fibroblast | 2.64e-09 | 76 |
muscle cell | 3.58e-09 | 55 |
receptor cell | 5.39e-08 | 6 |
sensory epithelial cell | 5.39e-08 | 6 |
olfactory epithelial cell | 5.39e-08 | 6 |
electrically responsive cell | 7.06e-08 | 61 |
electrically active cell | 7.06e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.05e-13 | 5 |
myotonic disease | 6.05e-13 | 5 |
muscle tissue disease | 6.05e-13 | 5 |
myopathy | 6.05e-13 | 5 |
muscular disease | 6.05e-13 | 5 |
myotonic dystrophy | 6.05e-13 | 5 |