FFCP PHASE1:Hg19::chr4:120192715..120192730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:120192715..120192730,+ | |||
|description=CAGE_peak_at_chr4:120192715..120192730,+ | |description=CAGE_peak_at_chr4:120192715..120192730,+ | ||
|id=chr4:120192715..120192730,+ | |id=chr4:120192715..120192730,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002561;1.37e-31;2!CL:0002559;2.85e-13;5!CL:0000134;2.44e-10;55!CL:0000048;1.77e-08;58!CL:0000362;8.89e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.00e-31,2;CL:0002559,2.52e-13,5;CL:0000362,8.31e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.42e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-10,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.37e-31;2!UBERON:0005942;1.37e-31;2!UBERON:0005932;1.37e-31;2!UBERON:0001389;1.65e-16;1!UBERON:0000026;1.65e-16;1!UBERON:0008784;1.65e-16;1!UBERON:0006058;1.65e-16;1!UBERON:0003663;1.65e-16;1!UBERON:0004256;1.65e-16;1!UBERON:0004708;1.65e-16;1!UBERON:0002101;1.65e-16;1!UBERON:0004709;1.65e-16;1!UBERON:0002529;1.65e-16;1!UBERON:0010538;1.65e-16;1!UBERON:0003661;1.65e-16;1!UBERON:0010890;1.65e-16;1!UBERON:0002471;1.65e-16;1!UBERON:0001383;1.65e-16;1!UBERON:0010758;1.65e-16;1!UBERON:0010707;1.65e-16;1!UBERON:0000978;1.65e-16;1!UBERON:0002103;1.65e-16;1!UBERON:0001665;1.65e-16;1!UBERON:0003823;1.65e-16;1!UBERON:0000154;1.65e-16;1!UBERON:0010709;1.65e-16;1!UBERON:0002073;2.85e-13;5!UBERON:0005090;6.42e-09;2!UBERON:0001630;6.42e-09;2!UBERON:0005631;5.26e-07;10!UBERON:0000158;5.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.00e-31,2;UBERON:0005942,1.00e-31,2;UBERON:0005932,1.00e-31,2;UBERON:0005418,1.65e-16,1;UBERON:0001389,1.65e-16,1;UBERON:0000026,1.65e-16,1;UBERON:0008784,1.65e-16,1;UBERON:0006058,1.65e-16,1;UBERON:0003663,1.65e-16,1;UBERON:0004256,1.65e-16,1;UBERON:0004708,1.65e-16,1;UBERON:0002101,1.65e-16,1;UBERON:0004709,1.65e-16,1;UBERON:0002529,1.65e-16,1;UBERON:0010538,1.65e-16,1;UBERON:0003661,1.65e-16,1;UBERON:0010890,1.65e-16,1;UBERON:0002471,1.65e-16,1;UBERON:0001383,1.65e-16,1;UBERON:0004357,1.65e-16,1;UBERON:0004347,1.65e-16,1;UBERON:0005420,1.65e-16,1;UBERON:0005732,1.65e-16,1;UBERON:0010758,1.65e-16,1;UBERON:0010707,1.65e-16,1;UBERON:0000978,1.65e-16,1;UBERON:0002103,1.65e-16,1;UBERON:0001665,1.65e-16,1;UBERON:0003823,1.65e-16,1;UBERON:0000154,1.65e-16,1;UBERON:0010709,1.65e-16,1;UBERON:0005733,1.65e-16,1;UBERON:0005730,1.65e-16,1;UBERON:0002073,2.52e-13,5;UBERON:0005086,2.52e-13,5;UBERON:0005090,6.42e-09,2;UBERON:0001630,6.42e-09,2 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,1.5644487552606,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,1.94826728407911,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.926864265692532,0,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0.597794722207204,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.265059536642971,0,0.414644220061482,0.252320850875628,0,0,0,0,1.85747171212792,2.16563844500876,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,1.06375246633948,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0,2.7992437530976,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0.965123526861645,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0,0.182091168006717,0.524497659837696,0,0.385076685522074,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0.183195186803725,1.06606955203727,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0.149254802886874,0.233713309847224,1.10961172300523,0,0.251567901752575,0,0.228840068396924,1.20984739010591,0,0.147855149989634,0.318593534327405,0,0,0,0.53168342911599,1.5652351854352,0.300515217994437,3.80805212168795,0,0,0,0,2.78667122089031,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0.535701835878287,0.336283722218824,0.606965604236632,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0.236664001461131,0.255640214277473,0,0,0,0.955538938977433,0.335566295393377,0,0,1.29485767437579,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0.235676547101626,0.392616934229891,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0,0.924351257262837,0.865253124247578,0.126166424835079,0,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0.21323398190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| ||
|short_description=p@chr4:120192715..120192730,+ | |short_description=p@chr4:120192715..120192730,+ | ||
}} | }} |
Latest revision as of 01:17, 30 July 2015
Short description: | p@chr4:120192715..120192730, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:120192715..120192730, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.00e-31 | 2 |
hair follicle cell | 2.52e-13 | 5 |
epidermal cell | 8.31e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.00e-31 | 2 |
hair outer root sheath | 1.00e-31 | 2 |
bulb of hair follicle | 1.00e-31 | 2 |
hindlimb bud | 1.65e-16 | 1 |
soleus muscle | 1.65e-16 | 1 |
appendage | 1.65e-16 | 1 |
lower limb segment | 1.65e-16 | 1 |
multi-limb segment region | 1.65e-16 | 1 |
hindlimb muscle | 1.65e-16 | 1 |
hindlimb zeugopod muscle | 1.65e-16 | 1 |
paired limb/fin | 1.65e-16 | 1 |
limb | 1.65e-16 | 1 |
pelvic appendage | 1.65e-16 | 1 |
limb segment | 1.65e-16 | 1 |
paired limb/fin segment | 1.65e-16 | 1 |
limb muscle | 1.65e-16 | 1 |
pelvic complex muscle | 1.65e-16 | 1 |
zeugopod | 1.65e-16 | 1 |
muscle of leg | 1.65e-16 | 1 |
paired limb/fin bud | 1.65e-16 | 1 |
limb bud | 1.65e-16 | 1 |
pelvic appendage bud | 1.65e-16 | 1 |
limb/fin field | 1.65e-16 | 1 |
subdivision of organism along appendicular axis | 1.65e-16 | 1 |
appendage girdle complex | 1.65e-16 | 1 |
leg | 1.65e-16 | 1 |
hindlimb | 1.65e-16 | 1 |
triceps surae | 1.65e-16 | 1 |
hindlimb zeugopod | 1.65e-16 | 1 |
posterior region of body | 1.65e-16 | 1 |
pelvic complex | 1.65e-16 | 1 |
limb field | 1.65e-16 | 1 |
hindlimb/pelvic fin field | 1.65e-16 | 1 |
hair follicle | 2.52e-13 | 5 |
hair follicle placode | 2.52e-13 | 5 |
muscle structure | 6.42e-09 | 2 |
muscle organ | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-10 | 14 |