FFCP PHASE1:Hg19::chr4:151749450..151749479,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:151749450..151749479,- | |||
|coexpression_cluster_id=C662 | |||
|description=CAGE_peak_at_chr4:151749450..151749479,- | |description=CAGE_peak_at_chr4:151749450..151749479,- | ||
|id=chr4:151749450..151749479,- | |id=chr4:151749450..151749479,- | ||
|ontology_enrichment_celltype=CL:0000838!4.31e-33!52;CL:0000738!1.85e-32!140;CL:0000542!3.55e-32!53;CL:0000051!3.55e-32!53;CL:0002087!4.63e-30!119;CL:0000037!2.61e-29!172;CL:0000566!2.61e-29!172;CL:0002031!7.42e-29!124;CL:0002032!4.26e-27!165;CL:0000837!4.26e-27!165;CL:0000988!3.15e-26!182;CL:0000791!3.86e-20!18;CL:0000789!3.86e-20!18;CL:0002420!3.86e-20!18;CL:0002419!3.86e-20!18;CL:0000790!3.86e-20!18;CL:0000084!6.03e-16!25;CL:0000827!6.03e-16!25;CL:0000625!1.51e-15!11;CL:0000945!1.62e-14!24;CL:0000826!1.62e-14!24;CL:0000236!4.97e-14!14 | |ontology_enrichment_celltype=CL:0000838!4.31e-33!52;CL:0000738!1.85e-32!140;CL:0000542!3.55e-32!53;CL:0000051!3.55e-32!53;CL:0002087!4.63e-30!119;CL:0000037!2.61e-29!172;CL:0000566!2.61e-29!172;CL:0002031!7.42e-29!124;CL:0002032!4.26e-27!165;CL:0000837!4.26e-27!165;CL:0000988!3.15e-26!182;CL:0000791!3.86e-20!18;CL:0000789!3.86e-20!18;CL:0002420!3.86e-20!18;CL:0002419!3.86e-20!18;CL:0000790!3.86e-20!18;CL:0000084!6.03e-16!25;CL:0000827!6.03e-16!25;CL:0000625!1.51e-15!11;CL:0000945!1.62e-14!24;CL:0000826!1.62e-14!24;CL:0000236!4.97e-14!14 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.52e-39;11!CL:0000791;6.77e-37;18!CL:0000789;6.77e-37;18!CL:0002419;6.77e-37;18!CL:0000084;1.33e-25;25!CL:0000542;4.55e-24;53!CL:0000236;3.84e-20;13!CL:0000623;1.12e-12;3!CL:0000945;1.21e-12;24!CL:0002087;6.00e-12;104!CL:0000226;1.25e-11;3!CL:0000842;1.25e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.92e-44,52;CL:0000542,1.81e-43,53;CL:0000051,1.81e-43,53;CL:0000625,2.38e-39,11;CL:0000791,8.10e-37,18;CL:0000789,8.10e-37,18;CL:0002420,8.10e-37,18;CL:0002419,8.10e-37,18;CL:0000790,8.10e-37,18;CL:0000738,2.36e-29,136;CL:0002087,1.25e-27,115;CL:0000084,1.51e-25,25;CL:0000827,1.51e-25,25;CL:0002031,1.67e-24,120;CL:0000037,1.74e-23,168;CL:0000988,8.04e-22,177;CL:0002032,2.41e-20,161;CL:0000837,2.41e-20,161;CL:0000236,5.67e-19,14;CL:0000945,7.37e-13,24;CL:0000826,7.37e-13,24;CL:0000623,1.15e-12,3;CL:0000825,1.15e-12,3;CL:0000226,1.19e-11,3;CL:0000842,1.19e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.77e-37;18!CL:0000051;4.55e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.29e-10!102;UBERON:0003061!7.29e-10!102;UBERON:0002193!2.42e-09!112;UBERON:0000178!1.53e-07!15;UBERON:0000179!1.53e-07!15;UBERON:0000463!1.53e-07!15;UBERON:0007023!7.05e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.87e-11;15!UBERON:0000179;7.87e-11;15!UBERON:0000463;7.87e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.23e-11,15;UBERON:0000179,9.23e-11,15;UBERON:0000463,9.23e-11,15 | |||
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|short_description=p@chr4:151749450..151749479,- | |short_description=p@chr4:151749450..151749479,- | ||
}} | }} |
Latest revision as of 02:14, 30 July 2015
Short description: | p@chr4:151749450..151749479, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151749450..151749479, - |
Coexpression cluster: | C662_Mast_CD8_Natural_Basophils_CD4_Peripheral_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.92e-44 | 52 |
lymphocyte | 1.81e-43 | 53 |
common lymphoid progenitor | 1.81e-43 | 53 |
CD8-positive, alpha-beta T cell | 2.38e-39 | 11 |
mature alpha-beta T cell | 8.10e-37 | 18 |
alpha-beta T cell | 8.10e-37 | 18 |
immature T cell | 8.10e-37 | 18 |
mature T cell | 8.10e-37 | 18 |
immature alpha-beta T cell | 8.10e-37 | 18 |
leukocyte | 2.36e-29 | 136 |
nongranular leukocyte | 1.25e-27 | 115 |
T cell | 1.51e-25 | 25 |
pro-T cell | 1.51e-25 | 25 |
hematopoietic lineage restricted progenitor cell | 1.67e-24 | 120 |
hematopoietic stem cell | 1.74e-23 | 168 |
hematopoietic cell | 8.04e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.41e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-20 | 161 |
B cell | 5.67e-19 | 14 |
lymphocyte of B lineage | 7.37e-13 | 24 |
pro-B cell | 7.37e-13 | 24 |
natural killer cell | 1.15e-12 | 3 |
pro-NK cell | 1.15e-12 | 3 |
single nucleate cell | 1.19e-11 | 3 |
mononuclear cell | 1.19e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.23e-11 | 15 |
haemolymphatic fluid | 9.23e-11 | 15 |
organism substance | 9.23e-11 | 15 |