FFCP PHASE1:Hg19::chr4:174926997..174927004,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:174926997..174927004,+ | |||
|coexpression_cluster_id=C389 | |coexpression_cluster_id=C389 | ||
|description=CAGE_peak_at_chr4:174926997..174927004,+ | |description=CAGE_peak_at_chr4:174926997..174927004,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002586!2.97e-13!3;CL:0000149!3.62e-10!4 | |ontology_enrichment_celltype=CL:0002586!2.97e-13!3;CL:0000149!3.62e-10!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.42e-50;1!UBERON:0004140;3.99e-50;1!UBERON:0003124;6.58e-50;1!UBERON:0004872;4.86e-29;7!UBERON:0005062;8.82e-14;4!UBERON:0007284;8.82e-14;4!UBERON:0006603;2.59e-07;65 | |ontology_enrichment_development_v019=UBERON:0010227;2.42e-50;1!UBERON:0004140;3.99e-50;1!UBERON:0003124;6.58e-50;1!UBERON:0004872;4.86e-29;7!UBERON:0005062;8.82e-14;4!UBERON:0007284;8.82e-14;4!UBERON:0006603;2.59e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.30e-28!3;UBERON:0009751!1.30e-28!3;UBERON:0000946!1.30e-28!3;UBERON:0002523!1.30e-28!3;UBERON:0005983!1.30e-28!3;UBERON:0002165!1.30e-28!3;UBERON:0002062!1.30e-28!3;UBERON:0007280!1.30e-28!3;UBERON:0002133!7.77e-20!2;UBERON:0002081!8.54e-20!2;UBERON:0007100!4.72e-16!27;UBERON:0004151!1.60e-13!3;UBERON:0000948!1.65e-13!24;UBERON:0005498!1.65e-13!24;UBERON:0004140!1.65e-13!24;UBERON:0009881!1.65e-13!24;UBERON:0004141!1.65e-13!24;UBERON:0003084!1.65e-13!24;UBERON:0007005!1.65e-13!24;UBERON:0004139!1.65e-13!24;UBERON:0004291!1.65e-13!24;UBERON:0001781!2.97e-13!3;UBERON:0001782!2.97e-13!3;UBERON:0005424!2.97e-13!3;UBERON:0002135!6.73e-11!1;UBERON:0002079!7.40e-11!1;UBERON:0002134!1.08e-10!1;UBERON:0005208!1.08e-10!1;UBERON:0005946!1.08e-10!1;UBERON:0005965!1.08e-10!1;UBERON:0002078!1.08e-10!1;UBERON:0002146!1.43e-10!1;UBERON:0005623!1.43e-10!1;UBERON:0001301!3.01e-10!1;UBERON:0003103!1.70e-09!69;UBERON:0000966!2.63e-08!5;UBERON:0005388!2.63e-08!5;UBERON:0001802!2.63e-08!5;UBERON:0004923!3.18e-07!57 | |ontology_enrichment_uberon=UBERON:0003978!1.30e-28!3;UBERON:0009751!1.30e-28!3;UBERON:0000946!1.30e-28!3;UBERON:0002523!1.30e-28!3;UBERON:0005983!1.30e-28!3;UBERON:0002165!1.30e-28!3;UBERON:0002062!1.30e-28!3;UBERON:0007280!1.30e-28!3;UBERON:0002133!7.77e-20!2;UBERON:0002081!8.54e-20!2;UBERON:0007100!4.72e-16!27;UBERON:0004151!1.60e-13!3;UBERON:0000948!1.65e-13!24;UBERON:0005498!1.65e-13!24;UBERON:0004140!1.65e-13!24;UBERON:0009881!1.65e-13!24;UBERON:0004141!1.65e-13!24;UBERON:0003084!1.65e-13!24;UBERON:0007005!1.65e-13!24;UBERON:0004139!1.65e-13!24;UBERON:0004291!1.65e-13!24;UBERON:0001781!2.97e-13!3;UBERON:0001782!2.97e-13!3;UBERON:0005424!2.97e-13!3;UBERON:0002135!6.73e-11!1;UBERON:0002079!7.40e-11!1;UBERON:0002134!1.08e-10!1;UBERON:0005208!1.08e-10!1;UBERON:0005946!1.08e-10!1;UBERON:0005965!1.08e-10!1;UBERON:0002078!1.08e-10!1;UBERON:0002146!1.43e-10!1;UBERON:0005623!1.43e-10!1;UBERON:0001301!3.01e-10!1;UBERON:0003103!1.70e-09!69;UBERON:0000966!2.63e-08!5;UBERON:0005388!2.63e-08!5;UBERON:0001802!2.63e-08!5;UBERON:0004923!3.18e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;1.46e-50;1!UBERON:0002079;2.42e-50;1!UBERON:0002133;4.32e-26;2!UBERON:0002081;5.56e-26;2!UBERON:0000948;3.99e-21;22!UBERON:0007100;1.02e-18;25!UBERON:0003978;6.76e-18;3!UBERON:0000946;6.76e-18;3!UBERON:0004151;8.00e-18;3!UBERON:0001987;1.29e-13;4!UBERON:0003103;2.42e-07;61 | |ontology_enrichment_uberon_v019=UBERON:0002135;1.46e-50;1!UBERON:0002079;2.42e-50;1!UBERON:0002133;4.32e-26;2!UBERON:0002081;5.56e-26;2!UBERON:0000948;3.99e-21;22!UBERON:0007100;1.02e-18;25!UBERON:0003978;6.76e-18;3!UBERON:0000946;6.76e-18;3!UBERON:0004151;8.00e-18;3!UBERON:0001987;1.29e-13;4!UBERON:0003103;2.42e-07;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,1.46e-50,1;UBERON:0002079,2.42e-50,1;UBERON:0002133,4.32e-26,2;UBERON:0002081,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0000948,1.88e-19,24;UBERON:0005498,1.88e-19,24;UBERON:0004140,1.88e-19,24;UBERON:0009881,1.88e-19,24;UBERON:0004141,1.88e-19,24;UBERON:0003084,1.88e-19,24;UBERON:0007005,1.88e-19,24;UBERON:0004139,1.88e-19,24;UBERON:0004291,1.88e-19,24;UBERON:0003978,6.76e-18,3;UBERON:0009751,6.76e-18,3;UBERON:0000946,6.76e-18,3;UBERON:0002523,6.76e-18,3;UBERON:0005983,6.76e-18,3;UBERON:0002165,6.76e-18,3;UBERON:0002062,6.76e-18,3;UBERON:0007280,6.76e-18,3;UBERON:0004151,8.00e-18,3;UBERON:0007100,2.09e-17,27;UBERON:0001987,1.29e-13,4;UBERON:0004340,1.29e-13,4;UBERON:0004872,2.17e-10,83;UBERON:0004797,1.89e-08,7;UBERON:0003124,2.35e-08,7;UBERON:0003103,1.88e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0545129870214,0.458320848023367,0.717873024576814,0,0,0.223171457441873,4.97157696401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5763439164804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28198769601764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0545129870214,0.458320848023367,0.717873024576814,0,0,0.223171457441873,4.97157696401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5763439164804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28198769601764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:174926997..174927004,+ | |short_description=p@chr4:174926997..174927004,+ | ||
}} | }} |
Latest revision as of 03:26, 30 July 2015
Short description: | p@chr4:174926997..174927004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:174926997..174927004, + |
Coexpression cluster: | C389_heart_left_umbilical_skin_skeletal_trachea_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 1.46e-50 | 1 |
left cardiac atrium | 2.42e-50 | 1 |
atrioventricular valve | 4.32e-26 | 2 |
cardiac atrium | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
heart | 1.88e-19 | 24 |
primitive heart tube | 1.88e-19 | 24 |
primary heart field | 1.88e-19 | 24 |
anterior lateral plate mesoderm | 1.88e-19 | 24 |
heart tube | 1.88e-19 | 24 |
heart primordium | 1.88e-19 | 24 |
cardiac mesoderm | 1.88e-19 | 24 |
cardiogenic plate | 1.88e-19 | 24 |
heart rudiment | 1.88e-19 | 24 |
valve | 6.76e-18 | 3 |
cardiac mesenchyme | 6.76e-18 | 3 |
cardial valve | 6.76e-18 | 3 |
tunica intima | 6.76e-18 | 3 |
heart layer | 6.76e-18 | 3 |
endocardium | 6.76e-18 | 3 |
endocardial cushion | 6.76e-18 | 3 |
presumptive endocardium | 6.76e-18 | 3 |
cardiac chamber | 8.00e-18 | 3 |
primary circulatory organ | 2.09e-17 | 27 |
placenta | 1.29e-13 | 4 |
allantois | 1.29e-13 | 4 |
splanchnic layer of lateral plate mesoderm | 2.17e-10 | 83 |
blood vessel layer | 1.89e-08 | 7 |
chorion | 2.35e-08 | 7 |
compound organ | 1.88e-07 | 68 |