FFCP PHASE1:Hg19::chr4:56814087..56814098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:56814087..56814098,- | |||
|description=CAGE_peak_at_chr4:56814087..56814098,- | |description=CAGE_peak_at_chr4:56814087..56814098,- | ||
|id=chr4:56814087..56814098,- | |id=chr4:56814087..56814098,- | ||
|ontology_enrichment_celltype=CL:0002139!5.81e-25!24;CL:0000115!2.58e-22!35;CL:0000071!1.65e-18!18;CL:0002546!1.65e-18!18;CL:0002078!1.34e-16!44;CL:0000213!3.90e-12!57;CL:0000215!3.90e-12!57;CL:1000413!1.03e-11!9;CL:0002544!2.61e-08!6;CL:0005020!5.05e-08!6;CL:0002138!5.05e-08!6;CL:0005022!5.05e-08!6 | |ontology_enrichment_celltype=CL:0002139!5.81e-25!24;CL:0000115!2.58e-22!35;CL:0000071!1.65e-18!18;CL:0002546!1.65e-18!18;CL:0002078!1.34e-16!44;CL:0000213!3.90e-12!57;CL:0000215!3.90e-12!57;CL:1000413!1.03e-11!9;CL:0002544!2.61e-08!6;CL:0005020!5.05e-08!6;CL:0002138!5.05e-08!6;CL:0005022!5.05e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.89e-84;24!CL:0000115;7.17e-61;36!CL:0000071;2.89e-57;18!CL:1000413;7.16e-43;9!CL:0002078;4.04e-37;45!CL:0002544;5.72e-29;6!CL:0002138;2.01e-28;6!CL:0000213;5.14e-24;58!CL:0000215;5.14e-24;58!CL:0002618;1.05e-14;3!CL:0002543;9.80e-13;6!CL:0002545;8.92e-11;2!CL:0000076;1.31e-09;63!CL:0002144;1.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0002139;5.89e-84;24!CL:0000115;7.17e-61;36!CL:0000071;2.89e-57;18!CL:1000413;7.16e-43;9!CL:0002078;4.04e-37;45!CL:0002544;5.72e-29;6!CL:0002138;2.01e-28;6!CL:0000213;5.14e-24;58!CL:0000215;5.14e-24;58!CL:0002618;1.05e-14;3!CL:0002543;9.80e-13;6!CL:0002545;8.92e-11;2!CL:0000076;1.31e-09;63!CL:0002144;1.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.11e-83,24;CL:0000115,5.38e-72,36;CL:0000071,2.15e-57,18;CL:0002546,2.15e-57,18;CL:0002078,1.72e-56,45;CL:1000413,4.06e-43,9;CL:0000213,1.38e-42,58;CL:0000215,1.38e-42,58;CL:0002544,3.93e-29,6;CL:0005020,5.84e-28,6;CL:0002138,5.84e-28,6;CL:0005022,5.84e-28,6;CL:0000222,1.54e-17,121;CL:0002618,2.73e-14,3;CL:0000076,5.34e-14,63;CL:0002543,1.26e-12,6;CL:0002545,7.73e-11,2;CL:0002144,1.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.89e-57;18!CL:0005022;2.01e-28;6!CL:0000222;7.59e-08;121 | |ontology_enrichment_development_v019=CL:0002546;2.89e-57;18!CL:0005022;2.01e-28;6!CL:0000222;7.59e-08;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.89e-57;18!UBERON:0001986;2.89e-57;18!UBERON:0004852;2.89e-57;18!UBERON:0000487;3.06e-46;22!UBERON:0003915;7.16e-43;9!UBERON:0004700;7.16e-43;9!UBERON:0001917;7.16e-43;9!UBERON:0006914;2.75e-40;25!UBERON:0000490;2.10e-30;33!UBERON:0001473;3.45e-21;8!UBERON:0004536;3.45e-21;8!UBERON:0006558;3.45e-21;8!UBERON:0000055;6.99e-21;65!UBERON:0002465;7.70e-17;10!UBERON:0007500;1.21e-13;56!UBERON:0001981;1.21e-13;56!UBERON:0004537;1.21e-13;56!UBERON:0002049;9.00e-13;75!UBERON:0007798;9.00e-13;75!UBERON:0005800;8.92e-11;2!UBERON:0002133;8.92e-11;2!UBERON:0001515;8.92e-11;2!UBERON:0000947;1.76e-10;21!UBERON:0010191;1.76e-10;21!UBERON:0002405;3.16e-10;27!UBERON:0001637;4.74e-10;42!UBERON:0003509;4.74e-10;42!UBERON:0004572;4.74e-10;42!UBERON:0004535;4.10e-09;109!UBERON:0002066;5.08e-09;5!UBERON:0003914;8.97e-09;74!UBERON:0001638;1.58e-08;9!UBERON:0003920;1.58e-08;9!UBERON:0004582;1.58e-08;9!UBERON:0000025;2.13e-08;93!UBERON:0001009;2.37e-08;112!UBERON:0003978;1.86e-07;3!UBERON:0010523;1.86e-07;3!UBERON:0000946;1.86e-07;3!UBERON:0001915;1.86e-07;3!UBERON:0001982;1.86e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.89e-57;18!UBERON:0001986;2.89e-57;18!UBERON:0004852;2.89e-57;18!UBERON:0000487;3.06e-46;22!UBERON:0003915;7.16e-43;9!UBERON:0004700;7.16e-43;9!UBERON:0001917;7.16e-43;9!UBERON:0006914;2.75e-40;25!UBERON:0000490;2.10e-30;33!UBERON:0001473;3.45e-21;8!UBERON:0004536;3.45e-21;8!UBERON:0006558;3.45e-21;8!UBERON:0000055;6.99e-21;65!UBERON:0002465;7.70e-17;10!UBERON:0007500;1.21e-13;56!UBERON:0001981;1.21e-13;56!UBERON:0004537;1.21e-13;56!UBERON:0002049;9.00e-13;75!UBERON:0007798;9.00e-13;75!UBERON:0005800;8.92e-11;2!UBERON:0002133;8.92e-11;2!UBERON:0001515;8.92e-11;2!UBERON:0000947;1.76e-10;21!UBERON:0010191;1.76e-10;21!UBERON:0002405;3.16e-10;27!UBERON:0001637;4.74e-10;42!UBERON:0003509;4.74e-10;42!UBERON:0004572;4.74e-10;42!UBERON:0004535;4.10e-09;109!UBERON:0002066;5.08e-09;5!UBERON:0003914;8.97e-09;74!UBERON:0001638;1.58e-08;9!UBERON:0003920;1.58e-08;9!UBERON:0004582;1.58e-08;9!UBERON:0000025;2.13e-08;93!UBERON:0001009;2.37e-08;112!UBERON:0003978;1.86e-07;3!UBERON:0010523;1.86e-07;3!UBERON:0000946;1.86e-07;3!UBERON:0001915;1.86e-07;3!UBERON:0001982;1.86e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.15e-57,18;UBERON:0001986,2.15e-57,18;UBERON:0004852,2.15e-57,18;UBERON:0000487,2.41e-46,22;UBERON:0003915,4.06e-43,9;UBERON:0004700,4.06e-43,9;UBERON:0001917,4.06e-43,9;UBERON:0006914,2.23e-40,25;UBERON:0000055,1.25e-38,68;UBERON:0002049,6.10e-33,78;UBERON:0007798,6.10e-33,78;UBERON:0007500,2.68e-25,59;UBERON:0001981,2.68e-25,59;UBERON:0004537,2.68e-25,59;UBERON:0006965,2.68e-25,59;UBERON:0004535,6.04e-24,109;UBERON:0001009,3.80e-23,112;UBERON:0004872,7.25e-21,83;UBERON:0001473,7.62e-21,8;UBERON:0004536,7.62e-21,8;UBERON:0006558,7.62e-21,8;UBERON:0002465,1.44e-16,10;UBERON:0003914,5.91e-15,117;UBERON:0004111,1.49e-12,240;UBERON:0005800,7.73e-11,2;UBERON:0001515,7.73e-11,2;UBERON:0002133,1.14e-10,2;UBERON:0000947,1.71e-10,21;UBERON:0010191,1.71e-10,21;UBERON:0001637,8.04e-10,42;UBERON:0003509,8.04e-10,42;UBERON:0004572,8.04e-10,42;UBERON:0003081,3.57e-09,203;UBERON:0000025,4.98e-09,192;UBERON:0002066,8.89e-09,5;UBERON:0001638,1.87e-08,9;UBERON:0003920,1.87e-08,9;UBERON:0004582,1.87e-08,9;UBERON:0010523,1.64e-07,3;UBERON:0001915,1.64e-07,3;UBERON:0001982,1.64e-07,3;UBERON:0003978,2.19e-07,3;UBERON:0009751,2.19e-07,3;UBERON:0000946,2.19e-07,3;UBERON:0002523,2.19e-07,3;UBERON:0005983,2.19e-07,3;UBERON:0002165,2.19e-07,3;UBERON:0002062,2.19e-07,3;UBERON:0007280,2.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.410502947249729,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0.768482119587302,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,1.76171156811282,0.764546456250458,2.64342657158052,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,1.39133685156694,3.4409383804245,1.73570250803797,2.26123176769604,2.51699661725944,3.30141650328081,1.46296476575767,1.03366703667732,1.42306505074684,2.00832367658802,1.61131726843659,2.28081631715554,0.732186172644509,2.20597848207521,1.62028389576352,1.42879565254528,1.12264686313085,1.0135033243499,0,0.949265659568129,1.83201743930407,0,0,0,0,0.759783069987479,0.264818361626438,1.14734648299525,0,0,0,0,0,0.67355336034844,1.14423332179421,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,3.69077727312324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,1.01056513432752,2.31492756288305,1.71228737011138,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19065593693561,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0,0.632758849437452,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.522109747527277,0,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0.451961481561065,0.274083849293502,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0.136905378891993,0,0,0,1.39641200636127,0.687481272035051,2.15361907373044,0.399358000997982,0,0.446342914883745,0.940568614814168,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.314727528809989,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.58620893471233,0,0.775697738169303,0.26446520348538,0,0,0.213574825135389,1.72924735609633,2.48543433208317,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0.228840068396924,0.302461847526478,0,0.295710299979268,0.477890301491107,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0,0,0.727394636810238,0.537052785212442,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.532214220975833,0.230467975111559,0,0.203909198930495,0.0657727735628491,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.588925401344836,0,0,0.169927114687817,0.469919589899268,2.06265241515447,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.18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| ||
|short_description=p@chr4:56814087..56814098,- | |short_description=p@chr4:56814087..56814098,- | ||
}} | }} |
Latest revision as of 05:45, 30 July 2015
Short description: | p@chr4:56814087..56814098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:56814087..56814098, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.11e-83 | 24 |
endothelial cell | 5.38e-72 | 36 |
blood vessel endothelial cell | 2.15e-57 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-57 | 18 |
meso-epithelial cell | 1.72e-56 | 45 |
endothelial cell of artery | 4.06e-43 | 9 |
lining cell | 1.38e-42 | 58 |
barrier cell | 1.38e-42 | 58 |
aortic endothelial cell | 3.93e-29 | 6 |
lymphangioblast | 5.84e-28 | 6 |
endothelial cell of lymphatic vessel | 5.84e-28 | 6 |
vascular lymphangioblast | 5.84e-28 | 6 |
mesodermal cell | 1.54e-17 | 121 |
endothelial cell of umbilical vein | 2.73e-14 | 3 |
squamous epithelial cell | 5.34e-14 | 63 |
vein endothelial cell | 1.26e-12 | 6 |
thoracic aorta endothelial cell | 7.73e-11 | 2 |
capillary endothelial cell | 1.64e-07 | 3 |