FFCP PHASE1:Hg19::chr4:56814087..56814098,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:56814087..56814098,-
|short_description=p@chr4:56814087..56814098,-
|description=CAGE_peak_at_chr4:56814087..56814098,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:56814087..56814098,- | |||
|description=CAGE_peak_at_chr4:56814087..56814098,- | |||
|id=chr4:56814087..56814098,- | |||
|ontology_enrichment_celltype=CL:0002139!5.81e-25!24;CL:0000115!2.58e-22!35;CL:0000071!1.65e-18!18;CL:0002546!1.65e-18!18;CL:0002078!1.34e-16!44;CL:0000213!3.90e-12!57;CL:0000215!3.90e-12!57;CL:1000413!1.03e-11!9;CL:0002544!2.61e-08!6;CL:0005020!5.05e-08!6;CL:0002138!5.05e-08!6;CL:0005022!5.05e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.89e-84;24!CL:0000115;7.17e-61;36!CL:0000071;2.89e-57;18!CL:1000413;7.16e-43;9!CL:0002078;4.04e-37;45!CL:0002544;5.72e-29;6!CL:0002138;2.01e-28;6!CL:0000213;5.14e-24;58!CL:0000215;5.14e-24;58!CL:0002618;1.05e-14;3!CL:0002543;9.80e-13;6!CL:0002545;8.92e-11;2!CL:0000076;1.31e-09;63!CL:0002144;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.11e-83,24;CL:0000115,5.38e-72,36;CL:0000071,2.15e-57,18;CL:0002546,2.15e-57,18;CL:0002078,1.72e-56,45;CL:1000413,4.06e-43,9;CL:0000213,1.38e-42,58;CL:0000215,1.38e-42,58;CL:0002544,3.93e-29,6;CL:0005020,5.84e-28,6;CL:0002138,5.84e-28,6;CL:0005022,5.84e-28,6;CL:0000222,1.54e-17,121;CL:0002618,2.73e-14,3;CL:0000076,5.34e-14,63;CL:0002543,1.26e-12,6;CL:0002545,7.73e-11,2;CL:0002144,1.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.89e-57;18!CL:0005022;2.01e-28;6!CL:0000222;7.59e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.64e-20!69;UBERON:0001986!1.65e-18!18;UBERON:0004638!1.65e-18!18;UBERON:0004852!1.65e-18!18;UBERON:0002049!8.74e-18!79;UBERON:0007798!8.74e-18!79;UBERON:0004872!3.92e-17!84;UBERON:0001981!4.87e-17!60;UBERON:0007500!4.87e-17!60;UBERON:0004537!4.87e-17!60;UBERON:0006965!4.87e-17!60;UBERON:0001009!1.41e-16!113;UBERON:0004535!8.47e-16!110;UBERON:0000487!6.53e-14!22;UBERON:0003915!1.03e-11!9;UBERON:0004700!1.03e-11!9;UBERON:0001917!1.03e-11!9;UBERON:0006914!1.81e-11!25;UBERON:0000025!3.06e-11!194;UBERON:0003914!6.99e-11!118;UBERON:0000477!8.31e-10!286;UBERON:0004111!1.21e-09!241;UBERON:0001637!1.76e-09!42;UBERON:0003509!1.76e-09!42;UBERON:0004572!1.76e-09!42;UBERON:0003081!9.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.89e-57;18!UBERON:0001986;2.89e-57;18!UBERON:0004852;2.89e-57;18!UBERON:0000487;3.06e-46;22!UBERON:0003915;7.16e-43;9!UBERON:0004700;7.16e-43;9!UBERON:0001917;7.16e-43;9!UBERON:0006914;2.75e-40;25!UBERON:0000490;2.10e-30;33!UBERON:0001473;3.45e-21;8!UBERON:0004536;3.45e-21;8!UBERON:0006558;3.45e-21;8!UBERON:0000055;6.99e-21;65!UBERON:0002465;7.70e-17;10!UBERON:0007500;1.21e-13;56!UBERON:0001981;1.21e-13;56!UBERON:0004537;1.21e-13;56!UBERON:0002049;9.00e-13;75!UBERON:0007798;9.00e-13;75!UBERON:0005800;8.92e-11;2!UBERON:0002133;8.92e-11;2!UBERON:0001515;8.92e-11;2!UBERON:0000947;1.76e-10;21!UBERON:0010191;1.76e-10;21!UBERON:0002405;3.16e-10;27!UBERON:0001637;4.74e-10;42!UBERON:0003509;4.74e-10;42!UBERON:0004572;4.74e-10;42!UBERON:0004535;4.10e-09;109!UBERON:0002066;5.08e-09;5!UBERON:0003914;8.97e-09;74!UBERON:0001638;1.58e-08;9!UBERON:0003920;1.58e-08;9!UBERON:0004582;1.58e-08;9!UBERON:0000025;2.13e-08;93!UBERON:0001009;2.37e-08;112!UBERON:0003978;1.86e-07;3!UBERON:0010523;1.86e-07;3!UBERON:0000946;1.86e-07;3!UBERON:0001915;1.86e-07;3!UBERON:0001982;1.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.15e-57,18;UBERON:0001986,2.15e-57,18;UBERON:0004852,2.15e-57,18;UBERON:0000487,2.41e-46,22;UBERON:0003915,4.06e-43,9;UBERON:0004700,4.06e-43,9;UBERON:0001917,4.06e-43,9;UBERON:0006914,2.23e-40,25;UBERON:0000055,1.25e-38,68;UBERON:0002049,6.10e-33,78;UBERON:0007798,6.10e-33,78;UBERON:0007500,2.68e-25,59;UBERON:0001981,2.68e-25,59;UBERON:0004537,2.68e-25,59;UBERON:0006965,2.68e-25,59;UBERON:0004535,6.04e-24,109;UBERON:0001009,3.80e-23,112;UBERON:0004872,7.25e-21,83;UBERON:0001473,7.62e-21,8;UBERON:0004536,7.62e-21,8;UBERON:0006558,7.62e-21,8;UBERON:0002465,1.44e-16,10;UBERON:0003914,5.91e-15,117;UBERON:0004111,1.49e-12,240;UBERON:0005800,7.73e-11,2;UBERON:0001515,7.73e-11,2;UBERON:0002133,1.14e-10,2;UBERON:0000947,1.71e-10,21;UBERON:0010191,1.71e-10,21;UBERON:0001637,8.04e-10,42;UBERON:0003509,8.04e-10,42;UBERON:0004572,8.04e-10,42;UBERON:0003081,3.57e-09,203;UBERON:0000025,4.98e-09,192;UBERON:0002066,8.89e-09,5;UBERON:0001638,1.87e-08,9;UBERON:0003920,1.87e-08,9;UBERON:0004582,1.87e-08,9;UBERON:0010523,1.64e-07,3;UBERON:0001915,1.64e-07,3;UBERON:0001982,1.64e-07,3;UBERON:0003978,2.19e-07,3;UBERON:0009751,2.19e-07,3;UBERON:0000946,2.19e-07,3;UBERON:0002523,2.19e-07,3;UBERON:0005983,2.19e-07,3;UBERON:0002165,2.19e-07,3;UBERON:0002062,2.19e-07,3;UBERON:0007280,2.19e-07,3 | |||
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| ||
|short_description=p@chr4:56814087..56814098,- | |||
}} | }} |
Latest revision as of 05:45, 30 July 2015
Short description: | p@chr4:56814087..56814098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:56814087..56814098, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.11e-83 | 24 |
endothelial cell | 5.38e-72 | 36 |
blood vessel endothelial cell | 2.15e-57 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.15e-57 | 18 |
meso-epithelial cell | 1.72e-56 | 45 |
endothelial cell of artery | 4.06e-43 | 9 |
lining cell | 1.38e-42 | 58 |
barrier cell | 1.38e-42 | 58 |
aortic endothelial cell | 3.93e-29 | 6 |
lymphangioblast | 5.84e-28 | 6 |
endothelial cell of lymphatic vessel | 5.84e-28 | 6 |
vascular lymphangioblast | 5.84e-28 | 6 |
mesodermal cell | 1.54e-17 | 121 |
endothelial cell of umbilical vein | 2.73e-14 | 3 |
squamous epithelial cell | 5.34e-14 | 63 |
vein endothelial cell | 1.26e-12 | 6 |
thoracic aorta endothelial cell | 7.73e-11 | 2 |
capillary endothelial cell | 1.64e-07 | 3 |