FFCP PHASE1:Hg19::chr4:88903841..88903876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=170bp_to_CU675498_5end | |association_with_transcript=170bp_to_CU675498_5end | ||
|cluster_id=chr4:88903841..88903876,- | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_1_at_CU675498_5end | |description=CAGE_peak_1_at_CU675498_5end | ||
|id=chr4:88903841..88903876,- | |id=chr4:88903841..88903876,- | ||
|ontology_enrichment_celltype=CL:0000235!1.48e-07!10 | |ontology_enrichment_celltype=CL:0000235!1.48e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.32e-38;6!CL:0000319;8.00e-08;1!CL:0000342;1.79e-07;1!CL:0002565;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.58e-38,6;CL:0000319,8.28e-08,1;CL:0000342,2.98e-07,1;CL:0002565,2.98e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.84e-09;3!UBERON:0003057;3.84e-09;3!UBERON:0006222;1.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;5.68e-14;2!DOID:3030;8.00e-08;1!DOID:4960;1.79e-07;1!DOID:0070004;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.17e-14,2;DOID:3030,8.28e-08,1;DOID:4960,2.80e-07,1;DOID:0070004,2.80e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;3.84e-09;3!UBERON:0005174;3.84e-09;3!UBERON:0001137;3.84e-09;3!UBERON:0002038;6.79e-08;1!UBERON:0009661;6.79e-08;1!UBERON:0002950;6.79e-08;1!UBERON:0001891;6.79e-08;1!UBERON:0002506;1.79e-07;1!UBERON:0001769;1.79e-07;1!UBERON:0000125;8.37e-07;9!UBERON:0002308;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.54e-09,3;UBERON:0005174,3.54e-09,3;UBERON:0001137,3.54e-09,3;UBERON:0002038,7.26e-08,1;UBERON:0009661,7.26e-08,1;UBERON:0002950,7.26e-08,1;UBERON:0001891,7.26e-08,1;UBERON:0009616,7.26e-08,1;UBERON:0010286,7.26e-08,1;UBERON:0002506,2.98e-07,1;UBERON:0001769,2.98e-07,1;UBERON:0000125,8.21e-07,9;UBERON:0002308,8.21e-07,9;UBERON:0003076,8.85e-07,15;UBERON:0003057,8.85e-07,15 | |||
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| ||
|short_description=p1@CU675498 | |short_description=p1@CU675498 | ||
}} | }} |
Latest revision as of 07:53, 30 July 2015
Short description: | p1@CU675498 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675498_5end |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | 170bp_to_CU675498_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.58e-38 | 6 |
mucus secreting cell | 8.28e-08 | 1 |
pigment cell (sensu Vertebrata) | 2.98e-07 | 1 |
iris pigment epithelial cell | 2.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 3.54e-09 | 3 |
dorsal region element | 3.54e-09 | 3 |
dorsum | 3.54e-09 | 3 |
substantia nigra | 7.26e-08 | 1 |
midbrain nucleus | 7.26e-08 | 1 |
regional part of midbrain | 7.26e-08 | 1 |
midbrain | 7.26e-08 | 1 |
presumptive midbrain | 7.26e-08 | 1 |
midbrain neural tube | 7.26e-08 | 1 |
iris epithelium | 2.98e-07 | 1 |
iris | 2.98e-07 | 1 |
neural nucleus | 8.21e-07 | 9 |
nucleus of brain | 8.21e-07 | 9 |
posterior neural tube | 8.85e-07 | 15 |
chordal neural plate | 8.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.17e-14 | 2 |
mucinous adenocarcinoma | 8.28e-08 | 1 |
bone marrow cancer | 2.80e-07 | 1 |
myeloma | 2.80e-07 | 1 |