FFCP PHASE1:Hg19::chr5:178686301..178686315,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:178686301..178686315,- | |||
|description=CAGE_peak_at_chr5:178686301..178686315,- | |||
|id=chr5:178686301..178686315,- | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-22!180;CL:0000057!3.10e-17!75;CL:0000048!1.61e-14!430;CL:0000723!4.74e-14!436;CL:0000034!1.91e-13!444;CL:0002334!1.62e-11!12;CL:0000680!2.51e-11!57;CL:0000056!2.51e-11!57;CL:0000355!2.51e-11!57;CL:0000187!1.46e-09!54;CL:0000144!5.40e-09!625;CL:0000359!6.00e-09!32;CL:0000183!2.33e-08!59;CL:0000192!2.76e-08!42;CL:0000514!2.76e-08!42;CL:0002580!2.77e-08!3;CL:0000393!3.83e-08!60;CL:0000211!3.83e-08!60;CL:0000135!5.20e-08!3;CL:0000386!5.20e-08!3;CL:0000388!5.20e-08!3;CL:0002371!8.03e-08!591;CL:0000222!1.13e-07!119;CL:0002620!1.43e-07!23;CL:0000548!3.42e-07!679;CL:0000004!3.42e-07!679;CL:0000255!3.42e-07!679;CL:0000012!4.58e-07!682;CL:0000134!7.80e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.28e-18;12!CL:0002580;6.69e-15;3!CL:0000135;2.90e-14;3!CL:0000388;2.90e-14;3!CL:0002539;1.09e-11;10!CL:0000197;1.20e-07;6!CL:0000098;1.20e-07;6!CL:0002167;1.20e-07;6!CL:0000214;5.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-18,76;CL:0002334,7.64e-18,12;CL:0002580,8.65e-15,3;CL:0000135,2.98e-14,3;CL:0000388,2.98e-14,3;CL:0002539,1.16e-11,10;CL:0000048,6.52e-08,427;CL:0000197,1.05e-07,6;CL:0000098,1.05e-07,6;CL:0002167,1.05e-07,6;CL:0000723,1.09e-07,433;CL:0000034,2.12e-07,441;CL:0000214,4.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.40e-07!5;DOID:450!1.40e-07!5;DOID:66!1.40e-07!5;DOID:423!1.40e-07!5;DOID:0080000!1.40e-07!5;DOID:11722!1.40e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.14e-10!61;UBERON:0002036!3.14e-10!61;UBERON:0003082!3.14e-10!61;UBERON:0004290!3.29e-10!70;UBERON:0000486!6.49e-10!82;UBERON:0002385!9.77e-10!63;UBERON:0001015!9.77e-10!63;UBERON:0000383!9.77e-10!63;UBERON:0000914!1.42e-08!83;UBERON:0002329!1.42e-08!83;UBERON:0003077!1.42e-08!83;UBERON:0003059!1.42e-08!83;UBERON:0007282!1.42e-08!83;UBERON:0009618!1.42e-08!83;UBERON:0007285!1.42e-08!83;UBERON:0001637!2.05e-08!42;UBERON:0003509!2.05e-08!42;UBERON:0004572!2.05e-08!42;UBERON:0000043!5.20e-08!3;UBERON:0004573!1.89e-07!33;UBERON:0004571!1.89e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.90e-14;3!UBERON:0000043;2.90e-14;3!UBERON:0007845;2.90e-14;3!UBERON:0004237;1.09e-11;10!UBERON:0004695;1.09e-11;10!UBERON:0002111;1.09e-11;10!UBERON:0004178;1.09e-11;10!UBERON:0000947;7.72e-10;21!UBERON:0010191;7.72e-10;21!UBERON:0005406;1.55e-09;2!UBERON:0004457;2.73e-08;9!UBERON:0000042;2.73e-08;9!UBERON:0004573;6.57e-08;33!UBERON:0004571;6.57e-08;33!UBERON:0001135;1.10e-07;15!UBERON:0000310;1.11e-07;10!UBERON:0006915;5.23e-07;3!UBERON:0007616;5.23e-07;3!UBERON:0002217;5.23e-07;3!UBERON:0002018;5.23e-07;3!UBERON:0001443;5.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.98e-14,3;UBERON:0000043,2.98e-14,3;UBERON:0007845,2.98e-14,3;UBERON:0004237,1.16e-11,10;UBERON:0004695,1.16e-11,10;UBERON:0002111,1.16e-11,10;UBERON:0004178,1.16e-11,10;UBERON:0000947,9.40e-10,21;UBERON:0010191,9.40e-10,21;UBERON:0005406,9.97e-10,2;UBERON:0004573,1.51e-09,33;UBERON:0004571,1.51e-09,33;UBERON:0000310,1.11e-07,10;UBERON:0001135,1.15e-07,15;UBERON:0001637,3.60e-07,42;UBERON:0003509,3.60e-07,42;UBERON:0004572,3.60e-07,42;UBERON:0006915,4.17e-07,3;UBERON:0007616,4.17e-07,3;UBERON:0002217,4.17e-07,3;UBERON:0002018,4.17e-07,3;UBERON:0001443,5.55e-07,11 | |||
|phase1_expression=2.90685406832891,0.642301571672949,2.96004248601539,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,1.06400514659507,0,2.1349799145941,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.89694817844431,0.427114777637135,0,3.60109315301283,1.54578793857658,2.57640540045629,1.48893485065272,0,0,0,0.0920498986422993,0,1.42003837006646,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.49959486773086,0,0,0,0,0,0,10.8585980000684,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92543775353756,5.83498935625558,2.6942525448324,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0,0,0,0,0,0,6.69891081110698,2.14846762603287,3.08726103876381,2.43464383585832,0,0,1.48418066444991,2.15893571323718,0.177561725313127,2.21743321237285,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0.712256285173899,0,0,0,0,6.97268323945929,8.18512101759664,3.485186350803,0,2.12922412126809,2.60979897622522,0,2.71937284809783,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0,0,0.243713489631284,0,0.136499911407986,0.989838023675989,0,1.10273068709225,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,4.43326034125095,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,17.1071773213994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,1.16856654923612,0,0.757612021100357,1.0062716070103,0,0,0,0,0,0,0,0.465788870628778,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,2.00033525122815,0,0,0.796191777397232,0.800055529326307,0.343395705182793,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0.358177682162975,0,0.657852148736121,1.06013487567529,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,3.81382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,2.31087814315709,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:178686301..178686315,- | |||
}} |
Latest revision as of 13:46, 30 July 2015
Short description: | p@chr5:178686301..178686315, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:178686301..178686315, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-18 | 76 |
preadipocyte | 7.64e-18 | 12 |
preadipocyte of the breast | 8.65e-15 | 3 |
fibrocyte | 2.98e-14 | 3 |
tendon cell | 2.98e-14 | 3 |
aortic smooth muscle cell | 1.16e-11 | 10 |
multi fate stem cell | 6.52e-08 | 427 |
receptor cell | 1.05e-07 | 6 |
sensory epithelial cell | 1.05e-07 | 6 |
olfactory epithelial cell | 1.05e-07 | 6 |
somatic stem cell | 1.09e-07 | 433 |
stem cell | 2.12e-07 | 441 |
synovial cell | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.98e-14 | 3 |
tendon | 2.98e-14 | 3 |
regular connective tissue | 2.98e-14 | 3 |
blood vessel smooth muscle | 1.16e-11 | 10 |
arterial system smooth muscle | 1.16e-11 | 10 |
artery smooth muscle tissue | 1.16e-11 | 10 |
aorta smooth muscle tissue | 1.16e-11 | 10 |
aorta | 9.40e-10 | 21 |
aortic system | 9.40e-10 | 21 |
perirenal fat | 9.97e-10 | 2 |
systemic artery | 1.51e-09 | 33 |
systemic arterial system | 1.51e-09 | 33 |
breast | 1.11e-07 | 10 |
smooth muscle tissue | 1.15e-07 | 15 |
artery | 3.60e-07 | 42 |
arterial blood vessel | 3.60e-07 | 42 |
arterial system | 3.60e-07 | 42 |
stratified squamous epithelium | 4.17e-07 | 3 |
layer of synovial tissue | 4.17e-07 | 3 |
synovial joint | 4.17e-07 | 3 |
synovial membrane of synovial joint | 4.17e-07 | 3 |
chest | 5.55e-07 | 11 |