FFCP PHASE1:Hg19::chr5:179637237..179637244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:179637237..179637244,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr5:179637237..179637244,- | |||
|id=chr5:179637237..179637244,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;9.45e-18;3!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.12e-17,3;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.14e-26;2!DOID:3908;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.18e-26,2;DOID:3908,3.60e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-25!57;UBERON:0005068!1.38e-25!57;UBERON:0006241!1.38e-25!57;UBERON:0007135!1.38e-25!57;UBERON:0002616!8.04e-22!59;UBERON:0001017!1.32e-20!82;UBERON:0003075!1.00e-19!86;UBERON:0007284!1.00e-19!86;UBERON:0005743!1.88e-19!86;UBERON:0000073!4.12e-19!94;UBERON:0001016!4.12e-19!94;UBERON:0002346!1.19e-18!90;UBERON:0000955!8.10e-18!69;UBERON:0006238!8.10e-18!69;UBERON:0001893!3.64e-17!34;UBERON:0002780!1.54e-16!41;UBERON:0001890!1.54e-16!41;UBERON:0006240!1.54e-16!41;UBERON:0003080!4.31e-16!42;UBERON:0007023!1.78e-15!115;UBERON:0002619!2.31e-15!22;UBERON:0001869!2.68e-15!32;UBERON:0002791!7.10e-15!33;UBERON:0002020!2.23e-14!34;UBERON:0003528!2.23e-14!34;UBERON:0000956!2.05e-13!25;UBERON:0000203!2.05e-13!25;UBERON:0001950!2.26e-13!20;UBERON:0003076!3.55e-11!15;UBERON:0003057!3.55e-11!15;UBERON:0004121!7.53e-11!169;UBERON:0000924!1.74e-10!173;UBERON:0006601!1.74e-10!173;UBERON:0003056!2.38e-10!61;UBERON:0004733!6.26e-10!12;UBERON:0002028!6.26e-10!12;UBERON:0007277!6.26e-10!12;UBERON:0002298!8.99e-10!8;UBERON:0000033!1.34e-09!123;UBERON:0002021!2.05e-09!5;UBERON:0004732!3.80e-09!13;UBERON:0000153!5.61e-09!129;UBERON:0007811!5.61e-09!129;UBERON:0001896!2.35e-07!3;UBERON:0005290!2.35e-07!3;UBERON:0010096!2.35e-07!3;UBERON:0000988!2.76e-07!3;UBERON:0000025!3.68e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.14e-26;2!UBERON:0002173;7.14e-26;2!UBERON:0002186;7.14e-26;2!UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0004821;9.45e-18;3!UBERON:0007499;9.45e-18;3!UBERON:0003215;9.45e-18;3!UBERON:0010368;9.45e-18;3!UBERON:0009911;9.45e-18;3!UBERON:0002299;9.45e-18;3!UBERON:0006524;9.45e-18;3!UBERON:0008874;9.45e-18;3!UBERON:0002169;9.45e-18;3!UBERON:0004894;9.45e-18;3!UBERON:0009856;1.13e-13;4!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0000473,9.81e-26,8;UBERON:0003135,4.69e-19,11;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0004176,4.33e-10,22;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22 | |||
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|short_description=p@chr5:179637237..179637244,- | |||
}} | }} |
Latest revision as of 13:56, 30 July 2015
Short description: | p@chr5:179637237..179637244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:179637237..179637244, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
testis | 9.81e-26 | 8 |
male reproductive organ | 4.69e-19 | 11 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
external genitalia | 4.33e-10 | 22 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |