FFCP PHASE1:Hg19::chr5:5140200..5140232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000512155_5end | |association_with_transcript=-33bp_to_ENST00000512155_5end | ||
|cluster_id=chr5:5140200..5140232,- | |||
|coexpression_cluster_id=C2822 | |coexpression_cluster_id=C2822 | ||
|description=CAGE_peak_1_at_ENST00000512155_5end | |description=CAGE_peak_1_at_ENST00000512155_5end | ||
|id=chr5:5140200..5140232,- | |id=chr5:5140200..5140232,- | ||
|ontology_enrichment_celltype=CL:0002322!6.18e-18!5;CL:0000128!1.17e-16!7;CL:0000126!1.17e-16!7;CL:0000127!1.17e-16!7;CL:0002453!1.17e-16!7;CL:0002319!9.63e-13!25;CL:0000133!1.45e-11!59;CL:0002605!2.32e-11!3;CL:0000047!1.51e-10!8;CL:0000064!6.23e-10!3;CL:0005012!6.23e-10!3;CL:0000067!6.23e-10!3;CL:0002304!6.23e-10!3;CL:0000221!5.43e-09!71 | |ontology_enrichment_celltype=CL:0002322!6.18e-18!5;CL:0000128!1.17e-16!7;CL:0000126!1.17e-16!7;CL:0000127!1.17e-16!7;CL:0002453!1.17e-16!7;CL:0002319!9.63e-13!25;CL:0000133!1.45e-11!59;CL:0002605!2.32e-11!3;CL:0000047!1.51e-10!8;CL:0000064!6.23e-10!3;CL:0005012!6.23e-10!3;CL:0000067!6.23e-10!3;CL:0002304!6.23e-10!3;CL:0000221!5.43e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.42e-66;5!CL:0002605;7.97e-40;3!CL:0002321;8.67e-32;15!CL:0000128;1.69e-17;7!CL:0000126;1.69e-17;7!CL:0000127;1.69e-17;7!CL:0000222;5.42e-15;1!CL:0000148;1.52e-12;10!CL:0000147;4.01e-09;14!CL:0002319;4.66e-08;25!CL:0000047;6.80e-08;2!CL:0000243;1.52e-07;15!CL:0000125;1.52e-07;15!CL:0000095;8.37e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-66,5;CL:0002605,3.35e-40,3;CL:0000128,1.17e-17,7;CL:0000126,1.17e-17,7;CL:0000127,1.17e-17,7;CL:0002453,1.17e-17,7;CL:0000148,1.44e-12,10;CL:0000541,1.44e-12,10;CL:0000333,8.08e-11,41;CL:0000133,4.17e-10,59;CL:0000147,3.85e-09,14;CL:0000221,3.14e-08,72;CL:0002319,4.09e-08,25;CL:0000243,1.31e-07,15;CL:0000125,1.31e-07,15;CL:0000030,1.31e-07,15;CL:0000339,1.31e-07,15;CL:0000095,7.34e-07,17;CL:0000123,7.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.77e-18;3!CL:0000133;1.81e-08;59!CL:0000339;1.52e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!6.23e-10!3;UBERON:0001775!6.23e-10!3;UBERON:0002037!3.66e-09!6;UBERON:0006215!3.66e-09!6;UBERON:0001017!3.71e-09!82;UBERON:0002680!6.31e-09!9;UBERON:0001895!6.31e-09!9;UBERON:0010092!6.31e-09!9;UBERON:0005743!1.53e-08!86;UBERON:0000488!1.50e-07!4;UBERON:0000073!2.39e-07!94;UBERON:0001016!2.39e-07!94 | |ontology_enrichment_uberon=UBERON:0001778!6.23e-10!3;UBERON:0001775!6.23e-10!3;UBERON:0002037!3.66e-09!6;UBERON:0006215!3.66e-09!6;UBERON:0001017!3.71e-09!82;UBERON:0002680!6.31e-09!9;UBERON:0001895!6.31e-09!9;UBERON:0010092!6.31e-09!9;UBERON:0005743!1.53e-08!86;UBERON:0000488!1.50e-07!4;UBERON:0000073!2.39e-07!94;UBERON:0001016!2.39e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-09;6!UBERON:0002680;9.10e-07;9!UBERON:0001895;9.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.06e-09,6;UBERON:0006215,1.06e-09,6;UBERON:0002680,9.37e-07,9;UBERON:0001895,9.37e-07,9;UBERON:0010092,9.37e-07,9 | |||
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| ||
|short_description=p1@ENST00000512155 | |short_description=p1@ENST00000512155 | ||
}} | }} |
Latest revision as of 15:07, 30 July 2015
Short description: | p1@ENST00000512155 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512155_5end |
Coexpression cluster: | C2822_Neural_Astrocyte_kidney_mesodermal_H9_cerebellum_Neurons |
Association with transcript: | -33bp_to_ENST00000512155_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.12e-66 | 5 |
astrocyte of the cerebral cortex | 3.35e-40 | 3 |
oligodendrocyte | 1.17e-17 | 7 |
macroglial cell | 1.17e-17 | 7 |
astrocyte | 1.17e-17 | 7 |
oligodendrocyte precursor cell | 1.17e-17 | 7 |
melanocyte | 1.44e-12 | 10 |
melanoblast | 1.44e-12 | 10 |
migratory neural crest cell | 8.08e-11 | 41 |
neurectodermal cell | 4.17e-10 | 59 |
pigment cell | 3.85e-09 | 14 |
ectodermal cell | 3.14e-08 | 72 |
neural cell | 4.09e-08 | 25 |
glial cell (sensu Vertebrata) | 1.31e-07 | 15 |
glial cell | 1.31e-07 | 15 |
glioblast | 1.31e-07 | 15 |
glioblast (sensu Vertebrata) | 1.31e-07 | 15 |
neuron associated cell | 7.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.06e-09 | 6 |
rhombic lip | 1.06e-09 | 6 |
regional part of metencephalon | 9.37e-07 | 9 |
metencephalon | 9.37e-07 | 9 |
future metencephalon | 9.37e-07 | 9 |