FFCP PHASE1:Hg19::chr5:65326407..65326411,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:65326407..65326411,+
|short_description=p@chr5:65326407..65326411,+
|description=CAGE_peak_at_chr5:65326407..65326411,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:65326407..65326411,+ | |||
|description=CAGE_peak_at_chr5:65326407..65326411,+ | |||
|id=chr5:65326407..65326411,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.05e-09;3!CL:0000737;1.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.01e-09,3;CL:0000513,1.01e-09,3;CL:0000737,1.31e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.05e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.28e-14,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.45e-26;1!UBERON:0009661;2.45e-26;1!UBERON:0002950;2.45e-26;1!UBERON:0001891;2.45e-26;1!UBERON:0009663;3.29e-15;7!UBERON:0001897;1.14e-13;2!UBERON:0001875;1.14e-13;2!UBERON:0006514;1.14e-13;2!UBERON:0010225;1.14e-13;2!UBERON:0002420;4.67e-12;9!UBERON:0000125;4.67e-12;9!UBERON:0007245;4.67e-12;9!UBERON:0002308;4.67e-12;9!UBERON:0010009;4.67e-12;9!UBERON:0010011;4.67e-12;9!UBERON:0000454;4.67e-12;9!UBERON:0002784;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.78e-26,1;UBERON:0009661,2.78e-26,1;UBERON:0002950,2.78e-26,1;UBERON:0001891,2.78e-26,1;UBERON:0009616,2.78e-26,1;UBERON:0010286,2.78e-26,1;UBERON:0009663,3.53e-15,7;UBERON:0001897,9.40e-14,2;UBERON:0010225,9.40e-14,2;UBERON:0001875,1.21e-13,2;UBERON:0006514,1.21e-13,2;UBERON:0002420,4.94e-12,9;UBERON:0000125,4.94e-12,9;UBERON:0007245,4.94e-12,9;UBERON:0002308,4.94e-12,9;UBERON:0010009,4.94e-12,9;UBERON:0010011,4.94e-12,9;UBERON:0000454,4.94e-12,9;UBERON:0002784,1.59e-07,4 | |||
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| ||
|short_description=p@chr5:65326407..65326411,+ | |||
}} | }} |
Latest revision as of 15:47, 30 July 2015
Short description: | p@chr5:65326407..65326411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:65326407..65326411, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.01e-09 | 3 |
cardiac muscle myoblast | 1.01e-09 | 3 |
striated muscle cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.78e-26 | 1 |
midbrain nucleus | 2.78e-26 | 1 |
regional part of midbrain | 2.78e-26 | 1 |
midbrain | 2.78e-26 | 1 |
presumptive midbrain | 2.78e-26 | 1 |
midbrain neural tube | 2.78e-26 | 1 |
telencephalic nucleus | 3.53e-15 | 7 |
dorsal plus ventral thalamus | 9.40e-14 | 2 |
thalamic complex | 9.40e-14 | 2 |
globus pallidus | 1.21e-13 | 2 |
pallidum | 1.21e-13 | 2 |
basal ganglion | 4.94e-12 | 9 |
neural nucleus | 4.94e-12 | 9 |
nuclear complex of neuraxis | 4.94e-12 | 9 |
nucleus of brain | 4.94e-12 | 9 |
aggregate regional part of brain | 4.94e-12 | 9 |
collection of basal ganglia | 4.94e-12 | 9 |
cerebral subcortex | 4.94e-12 | 9 |
regional part of diencephalon | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.28e-14 | 2 |